RNA–Protein interactions for RNA: ENST00000529667.1

SOX9-AS1-208, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 340 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-208ENST00000529667 NISCHQ9Y2I1 1504 aa14.48□□□□□ -0.09
SOX9-AS1-208ENST00000529667 CCDC180Q9P1Z9 1646 aa12.64□□□□□ -0.39
SOX9-AS1-208ENST00000529667 ZCCHC6Q5VYS8 1495 aaKnown RBP12.21□□□□□ -0.45
SOX9-AS1-208ENST00000529667 DCAF1Q9Y4B6 1507 aa12.18□□□□□ -0.46
SOX9-AS1-208ENST00000529667 MYO15BQ96JP2 1530 aa11.99□□□□□ -0.49
SOX9-AS1-208ENST00000529667 NACADO15069 1562 aa11.71□□□□□ -0.54
SOX9-AS1-208ENST00000529667 SHROOM4Q9ULL8 1493 aa11.65□□□□□ -0.54
SOX9-AS1-208ENST00000529667 DCAF8L2P0C7V8 631 aa11.65□□□□□ -0.54
SOX9-AS1-208ENST00000529667 RB1CC1Q8TDY2 1594 aa11.5□□□□□ -0.57
SOX9-AS1-208ENST00000529667 SUPT5HO00267 1087 aaKnown RBP11.48□□□□□ -0.57
SOX9-AS1-208ENST00000529667 ABCC9O60706 1549 aa11.45□□□□□ -0.58
SOX9-AS1-208ENST00000529667 SCRIBQ14160 1630 aa11.35□□□□□ -0.59
SOX9-AS1-208ENST00000529667 RSF1Q96T23 1441 aaPredicted RBP11.27□□□□□ -0.6
SOX9-AS1-208ENST00000529667 CHIC1Q5VXU3 224 aa11.25□□□□□ -0.61
SOX9-AS1-208ENST00000529667 BAZ1AQ9NRL2 1556 aaPredicted RBP11.24□□□□□ -0.61
SOX9-AS1-208ENST00000529667 UNC13AQ9UPW8 1703 aa11.1□□□□□ -0.63
SOX9-AS1-208ENST00000529667 MROH2BQ7Z745 1585 aa11.06□□□□□ -0.64
SOX9-AS1-208ENST00000529667 SMARCA4P51532 1647 aa11.05□□□□□ -0.64
SOX9-AS1-208ENST00000529667 CECR2Q9BXF3 1484 aa11.03□□□□□ -0.64
SOX9-AS1-208ENST00000529667 PEG3Q9GZU2 1588 aa11.03□□□□□ -0.64
SOX9-AS1-208ENST00000529667 TOP2AP11388 1531 aaKnown RBP11.02□□□□□ -0.65
SOX9-AS1-208ENST00000529667 WIZO95785 1651 aa10.98□□□□□ -0.65
SOX9-AS1-208ENST00000529667 TRIM41Q8WV44 630 aa10.96□□□□□ -0.65
SOX9-AS1-208ENST00000529667 BICRAQ9NZM4 1560 aa10.95□□□□□ -0.66
SOX9-AS1-208ENST00000529667 SMARCA2P51531 1590 aa10.93□□□□□ -0.66
SOX9-AS1-208ENST00000529667 AEBP2Q6ZN18 517 aaPredicted RBP10.92□□□□□ -0.66
SOX9-AS1-208ENST00000529667 EEA1Q15075 1411 aa10.87□□□□□ -0.67
SOX9-AS1-208ENST00000529667 EIF4G1Q04637 1599 aaKnown RBP10.83□□□□□ -0.68
SOX9-AS1-208ENST00000529667 CCDC88BA6NC98 1476 aa10.83□□□□□ -0.68
SOX9-AS1-208ENST00000529667 ATAD2BQ9ULI0 1458 aa10.8□□□□□ -0.68
SOX9-AS1-208ENST00000529667 HMGXB3Q12766 1538 aa10.78□□□□□ -0.68
SOX9-AS1-208ENST00000529667 BAZ1BQ9UIG0 1483 aaKnown RBP10.76□□□□□ -0.69
SOX9-AS1-208ENST00000529667 NCAPD3P42695 1498 aa10.75□□□□□ -0.69
SOX9-AS1-208ENST00000529667 TRIM26Q12899 539 aaPredicted RBP10.72□□□□□ -0.69
SOX9-AS1-208ENST00000529667 PABPN1Q86U42 306 aaKnown RBP eCLIP10.7□□□□□ -0.7
SOX9-AS1-208ENST00000529667 LOC105371045A0A1W2PR82 267 aa10.66□□□□□ -0.7
SOX9-AS1-208ENST00000529667 WRNQ14191 1432 aaPredicted RBP eCLIP10.66□□□□□ -0.7
SOX9-AS1-208ENST00000529667 ZEB1P37275 1124 aaPredicted RBP10.65□□□□□ -0.7
SOX9-AS1-208ENST00000529667 TNIKQ9UKE5 1360 aa10.62□□□□□ -0.71
SOX9-AS1-208ENST00000529667 HRCP23327 699 aa10.61□□□□□ -0.71
SOX9-AS1-208ENST00000529667 CSRNP3Q8WYN3 585 aa10.6□□□□□ -0.71
SOX9-AS1-208ENST00000529667 PRDM2Q13029 1718 aa10.6□□□□□ -0.71
SOX9-AS1-208ENST00000529667 KIF21BO75037 1637 aa10.57□□□□□ -0.72
SOX9-AS1-208ENST00000529667 TOP2BQ02880 1626 aa10.57□□□□□ -0.72
SOX9-AS1-208ENST00000529667 BIVM-ERCC5R4GMW8 1640 aa10.57□□□□□ -0.72
SOX9-AS1-208ENST00000529667 GOLGA3Q08378 1498 aa10.56□□□□□ -0.72
SOX9-AS1-208ENST00000529667 CEP164Q9UPV0 1460 aa10.56□□□□□ -0.72
SOX9-AS1-208ENST00000529667 PCGF6Q9BYE7 350 aa10.56□□□□□ -0.72
SOX9-AS1-208ENST00000529667 ABCC8Q09428 1581 aa10.55□□□□□ -0.72
SOX9-AS1-208ENST00000529667 CFTRP13569 1480 aa10.55□□□□□ -0.72
SOX9-AS1-208ENST00000529667 FAM9AQ8IZU1 332 aaPredicted RBP10.5□□□□□ -0.73
SOX9-AS1-208ENST00000529667 ERICH3Q5RHP9 1530 aa10.49□□□□□ -0.73
SOX9-AS1-208ENST00000529667 SYNJ1O43426 1573 aa10.48□□□□□ -0.73
SOX9-AS1-208ENST00000529667 SOGA1O94964 1423 aa10.45□□□□□ -0.74
SOX9-AS1-208ENST00000529667 CEP162Q5TB80 1403 aa10.45□□□□□ -0.74
SOX9-AS1-208ENST00000529667 CADPSQ9ULU8 1353 aa10.45□□□□□ -0.74
SOX9-AS1-208ENST00000529667 KIF27Q86VH2 1401 aa10.43□□□□□ -0.74
SOX9-AS1-208ENST00000529667 UBTFP17480 764 aaKnown RBP10.42□□□□□ -0.74
SOX9-AS1-208ENST00000529667 CC2D2AQ9P2K1 1620 aa10.39□□□□□ -0.75
SOX9-AS1-208ENST00000529667 PRXQ9BXM0 1461 aa10.38□□□□□ -0.75
SOX9-AS1-208ENST00000529667 LAMC3Q9Y6N6 1575 aa10.36□□□□□ -0.75
SOX9-AS1-208ENST00000529667 APLP2Q06481 763 aa10.36□□□□□ -0.75
SOX9-AS1-208ENST00000529667 CUX1P39880 1505 aa10.35□□□□□ -0.75
SOX9-AS1-208ENST00000529667 CLIP1P30622 1438 aa10.34□□□□□ -0.75
SOX9-AS1-208ENST00000529667 VPS8Q8N3P4 1428 aa10.33□□□□□ -0.76
SOX9-AS1-208ENST00000529667 RUSC2Q8N2Y8 1516 aa10.33□□□□□ -0.76
SOX9-AS1-208ENST00000529667 DNMBPQ6XZF7 1577 aa10.3□□□□□ -0.76
SOX9-AS1-208ENST00000529667 PDS5BQ9NTI5 1447 aa10.28□□□□□ -0.76
SOX9-AS1-208ENST00000529667 MAP3K1Q13233 1512 aa10.28□□□□□ -0.76
SOX9-AS1-208ENST00000529667 FANCD2Q9BXW9 1451 aa10.27□□□□□ -0.77
SOX9-AS1-208ENST00000529667 RAPGEF2Q9Y4G8 1499 aa10.27□□□□□ -0.77
SOX9-AS1-208ENST00000529667 ABCA10Q8WWZ4 1543 aa10.25□□□□□ -0.77
SOX9-AS1-208ENST00000529667 SLC24A1O60721 1099 aa10.25□□□□□ -0.77
SOX9-AS1-208ENST00000529667 CUL7Q14999 1698 aa10.25□□□□□ -0.77
SOX9-AS1-208ENST00000529667 CLSPNQ9HAW4 1339 aa10.24□□□□□ -0.77
SOX9-AS1-208ENST00000529667 IGF1RP08069 1367 aa10.23□□□□□ -0.77
SOX9-AS1-208ENST00000529667 CARMIL1Q5VZK9 1371 aa10.21□□□□□ -0.78
SOX9-AS1-208ENST00000529667 FHAD1B1AJZ9 1412 aa10.21□□□□□ -0.78
SOX9-AS1-208ENST00000529667 FGD5Q6ZNL6 1462 aa10.21□□□□□ -0.78
SOX9-AS1-208ENST00000529667 WDR97A6NE52 1622 aa10.21□□□□□ -0.78
SOX9-AS1-208ENST00000529667 CUX2O14529 1486 aa10.2□□□□□ -0.78
SOX9-AS1-208ENST00000529667 TOPBP1Q92547 1522 aa10.19□□□□□ -0.78
SOX9-AS1-208ENST00000529667 EFCAB5A4FU69 1503 aa10.18□□□□□ -0.78
SOX9-AS1-208ENST00000529667 ACIN1Q9UKV3 1341 aaKnown RBP10.15□□□□□ -0.78
SOX9-AS1-208ENST00000529667 CCER1Q8TC90 406 aaPredicted RBP10.15□□□□□ -0.78
SOX9-AS1-208ENST00000529667 EHMT2Q96KQ7 1210 aa10.15□□□□□ -0.78
SOX9-AS1-208ENST00000529667 AQRO60306 1485 aaKnown RBP eCLIP10.15□□□□□ -0.78
SOX9-AS1-208ENST00000529667 POLA1P09884 1462 aaPredicted RBP10.14□□□□□ -0.79
SOX9-AS1-208ENST00000529667 ARAP1Q96P48 1450 aa10.12□□□□□ -0.79
SOX9-AS1-208ENST00000529667 CTTNBP2Q8WZ74 1663 aa10.11□□□□□ -0.79
SOX9-AS1-208ENST00000529667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.11□□□□□ -0.79
SOX9-AS1-208ENST00000529667 ARHGAP35Q9NRY4 1499 aa10.1□□□□□ -0.79
SOX9-AS1-208ENST00000529667 FMN1Q68DA7 1419 aa10.1□□□□□ -0.79
SOX9-AS1-208ENST00000529667 RRBP1Q9P2E9 1410 aaKnown RBP10.1□□□□□ -0.79
SOX9-AS1-208ENST00000529667 ABCA5Q8WWZ7 1642 aa10.08□□□□□ -0.8
SOX9-AS1-208ENST00000529667 KIF21AQ7Z4S6 1674 aa10.08□□□□□ -0.8
SOX9-AS1-208ENST00000529667 FYCO1Q9BQS8 1478 aa10.07□□□□□ -0.8
SOX9-AS1-208ENST00000529667 THOC2Q8NI27 1593 aaKnown RBP10.06□□□□□ -0.8
SOX9-AS1-208ENST00000529667 GAPVD1Q14C86 1478 aa10.06□□□□□ -0.8
SOX9-AS1-208ENST00000529667 URB2Q14146 1524 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms