RNA–Protein interactions for RNA: ENST00000529604.1

LRP4-203, Transcript of LDL receptor related protein 4, humanhuman

TSL 2

Gene LRP4, Length 2,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-203ENST00000529604 NISCHQ9Y2I1 1504 aa17.46■□□□□ 0.39
LRP4-203ENST00000529604 CCDC180Q9P1Z9 1646 aa14.97□□□□□ -0.01
LRP4-203ENST00000529604 SHROOM4Q9ULL8 1493 aa14.72□□□□□ -0.05
LRP4-203ENST00000529604 ZCCHC6Q5VYS8 1495 aaKnown RBP14.7□□□□□ -0.06
LRP4-203ENST00000529604 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
LRP4-203ENST00000529604 DCAF1Q9Y4B6 1507 aa14.3□□□□□ -0.12
LRP4-203ENST00000529604 SUPT5HO00267 1087 aaKnown RBP14.29□□□□□ -0.12
LRP4-203ENST00000529604 ABCC9O60706 1549 aa14.2□□□□□ -0.14
LRP4-203ENST00000529604 SCRIBQ14160 1630 aa14.02□□□□□ -0.16
LRP4-203ENST00000529604 MYO15BQ96JP2 1530 aa13.99□□□□□ -0.17
LRP4-203ENST00000529604 NACADO15069 1562 aa13.93□□□□□ -0.18
LRP4-203ENST00000529604 RB1CC1Q8TDY2 1594 aa13.78□□□□□ -0.2
LRP4-203ENST00000529604 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
LRP4-203ENST00000529604 CHIC1Q5VXU3 224 aa13.7□□□□□ -0.22
LRP4-203ENST00000529604 CECR2Q9BXF3 1484 aa13.66□□□□□ -0.22
LRP4-203ENST00000529604 MROH2BQ7Z745 1585 aa13.57□□□□□ -0.24
LRP4-203ENST00000529604 UNC13AQ9UPW8 1703 aa13.54□□□□□ -0.24
LRP4-203ENST00000529604 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
LRP4-203ENST00000529604 WIZO95785 1651 aa13.48□□□□□ -0.25
LRP4-203ENST00000529604 BAZ1AQ9NRL2 1556 aaPredicted RBP13.43□□□□□ -0.26
LRP4-203ENST00000529604 BICRAQ9NZM4 1560 aa13.4□□□□□ -0.26
LRP4-203ENST00000529604 SMARCA4P51532 1647 aa13.36□□□□□ -0.27
LRP4-203ENST00000529604 TRIM41Q8WV44 630 aa13.32□□□□□ -0.28
LRP4-203ENST00000529604 LOC105371045A0A1W2PR82 267 aa13.31□□□□□ -0.28
LRP4-203ENST00000529604 TOP2AP11388 1531 aaKnown RBP13.25□□□□□ -0.29
LRP4-203ENST00000529604 FAM9AQ8IZU1 332 aaPredicted RBP13.23□□□□□ -0.29
LRP4-203ENST00000529604 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
LRP4-203ENST00000529604 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
LRP4-203ENST00000529604 EHMT2Q96KQ7 1210 aa13.15□□□□□ -0.3
LRP4-203ENST00000529604 EIF4G1Q04637 1599 aaKnown RBP13.12□□□□□ -0.31
LRP4-203ENST00000529604 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
LRP4-203ENST00000529604 PEG3Q9GZU2 1588 aa13.09□□□□□ -0.31
LRP4-203ENST00000529604 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
LRP4-203ENST00000529604 BAZ1BQ9UIG0 1483 aaKnown RBP13.06□□□□□ -0.32
LRP4-203ENST00000529604 PCGF6Q9BYE7 350 aa12.98□□□□□ -0.33
LRP4-203ENST00000529604 SOGA1O94964 1423 aa12.89□□□□□ -0.35
LRP4-203ENST00000529604 WRNQ14191 1432 aaPredicted RBP eCLIP12.89□□□□□ -0.35
LRP4-203ENST00000529604 NCAPD3P42695 1498 aa12.89□□□□□ -0.35
LRP4-203ENST00000529604 HMGXB3Q12766 1538 aa12.86□□□□□ -0.35
LRP4-203ENST00000529604 RUSC2Q8N2Y8 1516 aa12.85□□□□□ -0.35
LRP4-203ENST00000529604 SYNJ1O43426 1573 aa12.83□□□□□ -0.36
LRP4-203ENST00000529604 CSRNP3Q8WYN3 585 aa12.8□□□□□ -0.36
LRP4-203ENST00000529604 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
LRP4-203ENST00000529604 PPARGC1BQ86YN6 1023 aaKnown RBP12.76□□□□□ -0.37
LRP4-203ENST00000529604 CC2D2AQ9P2K1 1620 aa12.75□□□□□ -0.37
LRP4-203ENST00000529604 UBTFP17480 764 aaKnown RBP12.75□□□□□ -0.37
LRP4-203ENST00000529604 EEA1Q15075 1411 aa12.74□□□□□ -0.37
LRP4-203ENST00000529604 HRCP23327 699 aa12.72□□□□□ -0.37
LRP4-203ENST00000529604 CFTRP13569 1480 aa12.71□□□□□ -0.38
LRP4-203ENST00000529604 TOP2BQ02880 1626 aa12.69□□□□□ -0.38
LRP4-203ENST00000529604 CEP162Q5TB80 1403 aa12.68□□□□□ -0.38
LRP4-203ENST00000529604 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
LRP4-203ENST00000529604 GOLGA3Q08378 1498 aa12.67□□□□□ -0.38
LRP4-203ENST00000529604 CUX1P39880 1505 aa12.65□□□□□ -0.38
LRP4-203ENST00000529604 BIVM-ERCC5R4GMW8 1640 aa12.64□□□□□ -0.39
LRP4-203ENST00000529604 CADPSQ9ULU8 1353 aa12.64□□□□□ -0.39
LRP4-203ENST00000529604 TTBK1Q5TCY1 1321 aaPredicted RBP12.64□□□□□ -0.39
LRP4-203ENST00000529604 CEP164Q9UPV0 1460 aa12.62□□□□□ -0.39
LRP4-203ENST00000529604 RANGAP1P46060 587 aaPredicted RBP12.62□□□□□ -0.39
LRP4-203ENST00000529604 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
LRP4-203ENST00000529604 KIF21BO75037 1637 aa12.58□□□□□ -0.4
LRP4-203ENST00000529604 PELP1Q8IZL8 1130 aaKnown RBP12.57□□□□□ -0.4
LRP4-203ENST00000529604 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
LRP4-203ENST00000529604 PRDM2Q13029 1718 aa12.56□□□□□ -0.4
LRP4-203ENST00000529604 NESP48681 1621 aa12.55□□□□□ -0.4
LRP4-203ENST00000529604 FANCD2Q9BXW9 1451 aa12.52□□□□□ -0.4
LRP4-203ENST00000529604 KIF27Q86VH2 1401 aa12.52□□□□□ -0.4
LRP4-203ENST00000529604 CLIP1P30622 1438 aa12.52□□□□□ -0.41
LRP4-203ENST00000529604 FGD5Q6ZNL6 1462 aa12.49□□□□□ -0.41
LRP4-203ENST00000529604 CUX2O14529 1486 aa12.48□□□□□ -0.41
LRP4-203ENST00000529604 PRXQ9BXM0 1461 aa12.48□□□□□ -0.41
LRP4-203ENST00000529604 ERICH3Q5RHP9 1530 aa12.43□□□□□ -0.42
LRP4-203ENST00000529604 IGF1RP08069 1367 aa12.41□□□□□ -0.42
LRP4-203ENST00000529604 RAD54L2Q9Y4B4 1467 aa12.41□□□□□ -0.42
LRP4-203ENST00000529604 VPS8Q8N3P4 1428 aa12.41□□□□□ -0.42
LRP4-203ENST00000529604 TOPBP1Q92547 1522 aa12.4□□□□□ -0.43
LRP4-203ENST00000529604 DNMBPQ6XZF7 1577 aa12.39□□□□□ -0.43
LRP4-203ENST00000529604 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
LRP4-203ENST00000529604 APLP2Q06481 763 aa12.38□□□□□ -0.43
LRP4-203ENST00000529604 POLA1P09884 1462 aaPredicted RBP12.38□□□□□ -0.43
LRP4-203ENST00000529604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.37□□□□□ -0.43
LRP4-203ENST00000529604 CARMIL1Q5VZK9 1371 aa12.36□□□□□ -0.43
LRP4-203ENST00000529604 MYT1Q01538 1121 aa12.36□□□□□ -0.43
LRP4-203ENST00000529604 URB2Q14146 1524 aaKnown RBP12.35□□□□□ -0.43
LRP4-203ENST00000529604 PDS5BQ9NTI5 1447 aa12.34□□□□□ -0.43
LRP4-203ENST00000529604 ARAP1Q96P48 1450 aa12.34□□□□□ -0.43
LRP4-203ENST00000529604 ZEB1P37275 1124 aaPredicted RBP12.33□□□□□ -0.44
LRP4-203ENST00000529604 CCER1Q8TC90 406 aaPredicted RBP12.31□□□□□ -0.44
LRP4-203ENST00000529604 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
LRP4-203ENST00000529604 KIF21AQ7Z4S6 1674 aa12.3□□□□□ -0.44
LRP4-203ENST00000529604 ARHGAP35Q9NRY4 1499 aa12.29□□□□□ -0.44
LRP4-203ENST00000529604 TDRD9Q8NDG6 1382 aaKnown RBP12.29□□□□□ -0.44
LRP4-203ENST00000529604 HNRNPUL2Q1KMD3 747 aaKnown RBP12.28□□□□□ -0.44
LRP4-203ENST00000529604 P3H3Q8IVL6 736 aa12.26□□□□□ -0.45
LRP4-203ENST00000529604 KANK4Q5T7N3 995 aaPredicted RBP12.26□□□□□ -0.45
LRP4-203ENST00000529604 WDR97A6NE52 1622 aa12.21□□□□□ -0.46
LRP4-203ENST00000529604 GAPVD1Q14C86 1478 aa12.2□□□□□ -0.46
LRP4-203ENST00000529604 ATP1B4Q9UN42 357 aaPredicted RBP12.19□□□□□ -0.46
LRP4-203ENST00000529604 CUL7Q14999 1698 aa12.18□□□□□ -0.46
LRP4-203ENST00000529604 ABCA5Q8WWZ7 1642 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms