RNA–Protein interactions for RNA: ENST00000529128.1

CLMP-203, Transcript of CXADR like membrane protein, humanhuman

TSL 3

Gene CLMP, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMP-203ENST00000529128 NISCHQ9Y2I1 1504 aa18.33■□□□□ 0.53
CLMP-203ENST00000529128 AEBP2Q6ZN18 517 aaPredicted RBP17.19■□□□□ 0.34
CLMP-203ENST00000529128 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
CLMP-203ENST00000529128 CCDC180Q9P1Z9 1646 aa16.12■□□□□ 0.17
CLMP-203ENST00000529128 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
CLMP-203ENST00000529128 ABCC9O60706 1549 aa15.27■□□□□ 0.03
CLMP-203ENST00000529128 DCAF1Q9Y4B6 1507 aa15.21■□□□□ 0.03
CLMP-203ENST00000529128 MYO15BQ96JP2 1530 aa15.09■□□□□ 0.01
CLMP-203ENST00000529128 NACADO15069 1562 aa15.01□□□□□ -0.01
CLMP-203ENST00000529128 DCAF8L2P0C7V8 631 aa14.98□□□□□ -0.01
CLMP-203ENST00000529128 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
CLMP-203ENST00000529128 SCRIBQ14160 1630 aa14.72□□□□□ -0.05
CLMP-203ENST00000529128 SHROOM4Q9ULL8 1493 aa14.7□□□□□ -0.06
CLMP-203ENST00000529128 UNC13AQ9UPW8 1703 aa14.65□□□□□ -0.06
CLMP-203ENST00000529128 SENP3Q9H4L4 574 aaPredicted RBP14.62□□□□□ -0.07
CLMP-203ENST00000529128 BICRAQ9NZM4 1560 aa14.5□□□□□ -0.09
CLMP-203ENST00000529128 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
CLMP-203ENST00000529128 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLMP-203ENST00000529128 CECR2Q9BXF3 1484 aa14.23□□□□□ -0.13
CLMP-203ENST00000529128 BAZ1AQ9NRL2 1556 aaPredicted RBP14.16□□□□□ -0.14
CLMP-203ENST00000529128 MROH2BQ7Z745 1585 aa14.14□□□□□ -0.15
CLMP-203ENST00000529128 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
CLMP-203ENST00000529128 RSF1Q96T23 1441 aaPredicted RBP14.14□□□□□ -0.15
CLMP-203ENST00000529128 SUPT5HO00267 1087 aaKnown RBP14.05□□□□□ -0.16
CLMP-203ENST00000529128 EIF4G1Q04637 1599 aaKnown RBP14.04□□□□□ -0.16
CLMP-203ENST00000529128 WIZO95785 1651 aa14.02□□□□□ -0.16
CLMP-203ENST00000529128 PEG3Q9GZU2 1588 aa14.01□□□□□ -0.17
CLMP-203ENST00000529128 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
CLMP-203ENST00000529128 ATAD2BQ9ULI0 1458 aa13.92□□□□□ -0.18
CLMP-203ENST00000529128 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.19
CLMP-203ENST00000529128 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
CLMP-203ENST00000529128 NCAPD3P42695 1498 aa13.84□□□□□ -0.19
CLMP-203ENST00000529128 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
CLMP-203ENST00000529128 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
CLMP-203ENST00000529128 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
CLMP-203ENST00000529128 FOXD1Q16676 465 aa13.62□□□□□ -0.23
CLMP-203ENST00000529128 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
CLMP-203ENST00000529128 CFTRP13569 1480 aa13.48□□□□□ -0.25
CLMP-203ENST00000529128 PRDM2Q13029 1718 aa13.48□□□□□ -0.25
CLMP-203ENST00000529128 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
CLMP-203ENST00000529128 LAMC3Q9Y6N6 1575 aa13.4□□□□□ -0.26
CLMP-203ENST00000529128 NESP48681 1621 aa13.38□□□□□ -0.27
CLMP-203ENST00000529128 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
CLMP-203ENST00000529128 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
CLMP-203ENST00000529128 FANCD2Q9BXW9 1451 aa13.29□□□□□ -0.28
CLMP-203ENST00000529128 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
CLMP-203ENST00000529128 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.29
CLMP-203ENST00000529128 KIF21AQ7Z4S6 1674 aa13.26□□□□□ -0.29
CLMP-203ENST00000529128 TOP2BQ02880 1626 aa13.25□□□□□ -0.29
CLMP-203ENST00000529128 PDS5BQ9NTI5 1447 aa13.25□□□□□ -0.29
CLMP-203ENST00000529128 CUX1P39880 1505 aa13.24□□□□□ -0.29
CLMP-203ENST00000529128 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
CLMP-203ENST00000529128 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
CLMP-203ENST00000529128 PLPPR3Q6T4P5 718 aa13.19□□□□□ -0.3
CLMP-203ENST00000529128 DNMBPQ6XZF7 1577 aa13.19□□□□□ -0.3
CLMP-203ENST00000529128 URB2Q14146 1524 aaKnown RBP13.17□□□□□ -0.3
CLMP-203ENST00000529128 TOPBP1Q92547 1522 aa13.15□□□□□ -0.3
CLMP-203ENST00000529128 MRC2Q9UBG0 1479 aa13.12□□□□□ -0.31
CLMP-203ENST00000529128 THOC2Q8NI27 1593 aaKnown RBP13.11□□□□□ -0.31
CLMP-203ENST00000529128 FGD5Q6ZNL6 1462 aa13.1□□□□□ -0.31
CLMP-203ENST00000529128 WDR62O43379 1518 aa13.09□□□□□ -0.31
CLMP-203ENST00000529128 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
CLMP-203ENST00000529128 POLA1P09884 1462 aaPredicted RBP13.08□□□□□ -0.32
CLMP-203ENST00000529128 SOGA1O94964 1423 aa13.06□□□□□ -0.32
CLMP-203ENST00000529128 WDR97A6NE52 1622 aa13.04□□□□□ -0.32
CLMP-203ENST00000529128 RUSC2Q8N2Y8 1516 aa13.03□□□□□ -0.32
CLMP-203ENST00000529128 EEA1Q15075 1411 aa13.03□□□□□ -0.32
CLMP-203ENST00000529128 ABCA10Q8WWZ4 1543 aa13.01□□□□□ -0.33
CLMP-203ENST00000529128 TARBP1Q13395 1621 aaKnown RBP13□□□□□ -0.33
CLMP-203ENST00000529128 RAD54L2Q9Y4B4 1467 aa13□□□□□ -0.33
CLMP-203ENST00000529128 CUX2O14529 1486 aa12.99□□□□□ -0.33
CLMP-203ENST00000529128 KIF27Q86VH2 1401 aa12.96□□□□□ -0.34
CLMP-203ENST00000529128 FAM9AQ8IZU1 332 aaPredicted RBP12.95□□□□□ -0.34
CLMP-203ENST00000529128 ABCA5Q8WWZ7 1642 aa12.95□□□□□ -0.34
CLMP-203ENST00000529128 IFT140Q96RY7 1462 aa12.93□□□□□ -0.34
CLMP-203ENST00000529128 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
CLMP-203ENST00000529128 KIF21BO75037 1637 aa12.91□□□□□ -0.34
CLMP-203ENST00000529128 PRXQ9BXM0 1461 aa12.88□□□□□ -0.35
CLMP-203ENST00000529128 IGF1RP08069 1367 aa12.87□□□□□ -0.35
CLMP-203ENST00000529128 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
CLMP-203ENST00000529128 LOC105371045A0A1W2PR82 267 aa12.86□□□□□ -0.35
CLMP-203ENST00000529128 ZNF608Q9ULD9 1512 aaPredicted RBP12.86□□□□□ -0.35
CLMP-203ENST00000529128 PBRM1Q86U86 1689 aa12.86□□□□□ -0.35
CLMP-203ENST00000529128 GAPVD1Q14C86 1478 aa12.85□□□□□ -0.35
CLMP-203ENST00000529128 ERICH3Q5RHP9 1530 aa12.85□□□□□ -0.35
CLMP-203ENST00000529128 EIF4G3O43432 1585 aaKnown RBP12.85□□□□□ -0.35
CLMP-203ENST00000529128 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
CLMP-203ENST00000529128 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
CLMP-203ENST00000529128 CUL7Q14999 1698 aa12.83□□□□□ -0.35
CLMP-203ENST00000529128 AQRO60306 1485 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLMP-203ENST00000529128 RAPGEF2Q9Y4G8 1499 aa12.82□□□□□ -0.36
CLMP-203ENST00000529128 GRIN2BQ13224 1484 aa12.79□□□□□ -0.36
CLMP-203ENST00000529128 ADRA2BP18089 450 aa12.78□□□□□ -0.36
CLMP-203ENST00000529128 CARMIL1Q5VZK9 1371 aa12.78□□□□□ -0.36
CLMP-203ENST00000529128 ADAMTS12P58397 1594 aa12.77□□□□□ -0.36
CLMP-203ENST00000529128 TNIKQ9UKE5 1360 aa12.75□□□□□ -0.37
CLMP-203ENST00000529128 PIAS4Q8N2W9 510 aaPredicted RBP12.74□□□□□ -0.37
CLMP-203ENST00000529128 EHMT2Q96KQ7 1210 aa12.73□□□□□ -0.37
CLMP-203ENST00000529128 SNAPC4Q5SXM2 1469 aa12.72□□□□□ -0.37
CLMP-203ENST00000529128 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms