RNA–Protein interactions for RNA: ENST00000528810.1

ARHGAP39-203, Transcript of Rho GTPase activating protein 39, humanhuman

TSL 4

Gene ARHGAP39, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39-203ENST00000528810 NISCHQ9Y2I1 1504 aa37.47■■■■□ 3.59
ARHGAP39-203ENST00000528810 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
ARHGAP39-203ENST00000528810 ABCC9O60706 1549 aa32.17■■■□□ 2.74
ARHGAP39-203ENST00000528810 DCAF8L2P0C7V8 631 aa31.31■■■□□ 2.6
ARHGAP39-203ENST00000528810 ZCCHC6Q5VYS8 1495 aaKnown RBP31.26■■■□□ 2.59
ARHGAP39-203ENST00000528810 NACADO15069 1562 aa31.08■■■□□ 2.57
ARHGAP39-203ENST00000528810 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
ARHGAP39-203ENST00000528810 DCAF1Q9Y4B6 1507 aa30.96■■■□□ 2.55
ARHGAP39-203ENST00000528810 MYO15BQ96JP2 1530 aa30.94■■■□□ 2.54
ARHGAP39-203ENST00000528810 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
ARHGAP39-203ENST00000528810 SCRIBQ14160 1630 aa30.35■■■□□ 2.45
ARHGAP39-203ENST00000528810 PABPN1Q86U42 306 aaKnown RBP eCLIP30.14■■■□□ 2.42
ARHGAP39-203ENST00000528810 BICRAQ9NZM4 1560 aa30.1■■■□□ 2.41
ARHGAP39-203ENST00000528810 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
ARHGAP39-203ENST00000528810 EIF4G1Q04637 1599 aaKnown RBP29.28■■■□□ 2.28
ARHGAP39-203ENST00000528810 DNAJC5BQ9UF47 199 aa29.2■■■□□ 2.26
ARHGAP39-203ENST00000528810 CECR2Q9BXF3 1484 aa29.18■■■□□ 2.26
ARHGAP39-203ENST00000528810 CC2D2AQ9P2K1 1620 aa29.1■■■□□ 2.25
ARHGAP39-203ENST00000528810 SMARCA4P51532 1647 aa29.02■■■□□ 2.24
ARHGAP39-203ENST00000528810 BAZ1AQ9NRL2 1556 aaPredicted RBP29.02■■■□□ 2.24
ARHGAP39-203ENST00000528810 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
ARHGAP39-203ENST00000528810 ATAD2BQ9ULI0 1458 aa28.75■■■□□ 2.19
ARHGAP39-203ENST00000528810 SMARCA2P51531 1590 aa28.74■■■□□ 2.19
ARHGAP39-203ENST00000528810 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
ARHGAP39-203ENST00000528810 PEG3Q9GZU2 1588 aa28.67■■■□□ 2.18
ARHGAP39-203ENST00000528810 WIZO95785 1651 aa28.66■■■□□ 2.18
ARHGAP39-203ENST00000528810 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
ARHGAP39-203ENST00000528810 BAZ1BQ9UIG0 1483 aaKnown RBP28.56■■■□□ 2.16
ARHGAP39-203ENST00000528810 HMGXB3Q12766 1538 aa28.55■■■□□ 2.16
ARHGAP39-203ENST00000528810 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
ARHGAP39-203ENST00000528810 TOP2AP11388 1531 aaKnown RBP28.31■■■□□ 2.12
ARHGAP39-203ENST00000528810 CCDC88BA6NC98 1476 aa28■■■□□ 2.07
ARHGAP39-203ENST00000528810 NESP48681 1621 aa27.94■■■□□ 2.06
ARHGAP39-203ENST00000528810 LAMC3Q9Y6N6 1575 aa27.87■■■□□ 2.05
ARHGAP39-203ENST00000528810 CADPSQ9ULU8 1353 aa27.86■■■□□ 2.05
ARHGAP39-203ENST00000528810 CFTRP13569 1480 aa27.76■■■□□ 2.03
ARHGAP39-203ENST00000528810 ERCC6Q03468 1493 aa27.69■■■□□ 2.02
ARHGAP39-203ENST00000528810 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
ARHGAP39-203ENST00000528810 PRDM2Q13029 1718 aa27.67■■■□□ 2.02
ARHGAP39-203ENST00000528810 KIF21AQ7Z4S6 1674 aa27.65■■■□□ 2.02
ARHGAP39-203ENST00000528810 FANCD2Q9BXW9 1451 aa27.57■■■□□ 2
ARHGAP39-203ENST00000528810 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
ARHGAP39-203ENST00000528810 THOC2Q8NI27 1593 aaKnown RBP27.4■■□□□ 1.98
ARHGAP39-203ENST00000528810 MRC2Q9UBG0 1479 aa27.38■■□□□ 1.97
ARHGAP39-203ENST00000528810 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.96
ARHGAP39-203ENST00000528810 WDR62O43379 1518 aa27.25■■□□□ 1.95
ARHGAP39-203ENST00000528810 CUX2O14529 1486 aa27.21■■□□□ 1.95
ARHGAP39-203ENST00000528810 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
ARHGAP39-203ENST00000528810 ABCC8Q09428 1581 aa27.16■■□□□ 1.94
ARHGAP39-203ENST00000528810 DNMBPQ6XZF7 1577 aa27.16■■□□□ 1.94
ARHGAP39-203ENST00000528810 CUX1P39880 1505 aa27.1■■□□□ 1.93
ARHGAP39-203ENST00000528810 WRNQ14191 1432 aaPredicted RBP eCLIP27.05■■□□□ 1.92
ARHGAP39-203ENST00000528810 SYNJ1O43426 1573 aa26.98■■□□□ 1.91
ARHGAP39-203ENST00000528810 FGD5Q6ZNL6 1462 aa26.95■■□□□ 1.91
ARHGAP39-203ENST00000528810 TOP2BQ02880 1626 aa26.95■■□□□ 1.91
ARHGAP39-203ENST00000528810 BIVM-ERCC5R4GMW8 1640 aa26.95■■□□□ 1.91
ARHGAP39-203ENST00000528810 POLA1P09884 1462 aaPredicted RBP26.94■■□□□ 1.9
ARHGAP39-203ENST00000528810 IFT140Q96RY7 1462 aa26.88■■□□□ 1.89
ARHGAP39-203ENST00000528810 SOGA1O94964 1423 aa26.87■■□□□ 1.89
ARHGAP39-203ENST00000528810 RAD54L2Q9Y4B4 1467 aa26.87■■□□□ 1.89
ARHGAP39-203ENST00000528810 TARBP1Q13395 1621 aaKnown RBP26.84■■□□□ 1.89
ARHGAP39-203ENST00000528810 ZNF608Q9ULD9 1512 aaPredicted RBP26.76■■□□□ 1.87
ARHGAP39-203ENST00000528810 WDR97A6NE52 1622 aa26.72■■□□□ 1.87
ARHGAP39-203ENST00000528810 TRIM41Q8WV44 630 aa26.71■■□□□ 1.87
ARHGAP39-203ENST00000528810 DNAJC5Q9H3Z4 198 aa26.71■■□□□ 1.87
ARHGAP39-203ENST00000528810 TDRD9Q8NDG6 1382 aaKnown RBP26.69■■□□□ 1.86
ARHGAP39-203ENST00000528810 ABCA10Q8WWZ4 1543 aa26.68■■□□□ 1.86
ARHGAP39-203ENST00000528810 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.86
ARHGAP39-203ENST00000528810 EIF4G3O43432 1585 aaKnown RBP26.67■■□□□ 1.86
ARHGAP39-203ENST00000528810 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
ARHGAP39-203ENST00000528810 GAPVD1Q14C86 1478 aa26.55■■□□□ 1.84
ARHGAP39-203ENST00000528810 ABCA5Q8WWZ7 1642 aa26.55■■□□□ 1.84
ARHGAP39-203ENST00000528810 PBRM1Q86U86 1689 aa26.53■■□□□ 1.84
ARHGAP39-203ENST00000528810 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
ARHGAP39-203ENST00000528810 KIF27Q86VH2 1401 aa26.45■■□□□ 1.82
ARHGAP39-203ENST00000528810 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
ARHGAP39-203ENST00000528810 RUSC2Q8N2Y8 1516 aa26.37■■□□□ 1.81
ARHGAP39-203ENST00000528810 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
ARHGAP39-203ENST00000528810 ERICH3Q5RHP9 1530 aa26.36■■□□□ 1.81
ARHGAP39-203ENST00000528810 FBLN2P98095 1184 aa26.35■■□□□ 1.81
ARHGAP39-203ENST00000528810 CHD1O14646 1710 aa26.34■■□□□ 1.81
ARHGAP39-203ENST00000528810 IGF1RP08069 1367 aa26.3■■□□□ 1.8
ARHGAP39-203ENST00000528810 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
ARHGAP39-203ENST00000528810 ADAMTS12P58397 1594 aa26.28■■□□□ 1.8
ARHGAP39-203ENST00000528810 SYNJ2O15056 1496 aa26.27■■□□□ 1.8
ARHGAP39-203ENST00000528810 FHAD1B1AJZ9 1412 aa26.24■■□□□ 1.79
ARHGAP39-203ENST00000528810 CUL7Q14999 1698 aa26.22■■□□□ 1.79
ARHGAP39-203ENST00000528810 FAM9AQ8IZU1 332 aaPredicted RBP26.22■■□□□ 1.79
ARHGAP39-203ENST00000528810 OSCARQ8IYS5 282 aa26.21■■□□□ 1.79
ARHGAP39-203ENST00000528810 CARMIL1Q5VZK9 1371 aa26.17■■□□□ 1.78
ARHGAP39-203ENST00000528810 EEA1Q15075 1411 aa26.15■■□□□ 1.78
ARHGAP39-203ENST00000528810 GRIN2AQ12879 1464 aa26.15■■□□□ 1.78
ARHGAP39-203ENST00000528810 CSRNP3Q8WYN3 585 aa26.13■■□□□ 1.77
ARHGAP39-203ENST00000528810 RAPGEF2Q9Y4G8 1499 aa26.04■■□□□ 1.76
ARHGAP39-203ENST00000528810 CEP170Q5SW79 1584 aa26.03■■□□□ 1.76
ARHGAP39-203ENST00000528810 PRXQ9BXM0 1461 aa26■■□□□ 1.75
ARHGAP39-203ENST00000528810 NUP160Q12769 1436 aa25.99■■□□□ 1.75
ARHGAP39-203ENST00000528810 CLASP1Q7Z460 1538 aa25.97■■□□□ 1.75
ARHGAP39-203ENST00000528810 EHMT2Q96KQ7 1210 aa25.89■■□□□ 1.74
ARHGAP39-203ENST00000528810 KIF21BO75037 1637 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms