RNA–Protein interactions for RNA: ENST00000528539.1

AP000435.1-201, humanhuman

BASIC

Gene AP000435.1, Length 496 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000435.1-201ENST00000528539 NISCHQ9Y2I1 1504 aa17.39■□□□□ 0.37
AP000435.1-201ENST00000528539 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
AP000435.1-201ENST00000528539 ZCCHC6Q5VYS8 1495 aaKnown RBP14.66□□□□□ -0.06
AP000435.1-201ENST00000528539 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
AP000435.1-201ENST00000528539 SHROOM4Q9ULL8 1493 aa14.33□□□□□ -0.12
AP000435.1-201ENST00000528539 DCAF8L2P0C7V8 631 aa14.26□□□□□ -0.13
AP000435.1-201ENST00000528539 MYO15BQ96JP2 1530 aa14.15□□□□□ -0.14
AP000435.1-201ENST00000528539 ABCC9O60706 1549 aa13.96□□□□□ -0.17
AP000435.1-201ENST00000528539 SUPT5HO00267 1087 aaKnown RBP13.94□□□□□ -0.18
AP000435.1-201ENST00000528539 NACADO15069 1562 aa13.93□□□□□ -0.18
AP000435.1-201ENST00000528539 SCRIBQ14160 1630 aa13.77□□□□□ -0.21
AP000435.1-201ENST00000528539 RB1CC1Q8TDY2 1594 aa13.71□□□□□ -0.22
AP000435.1-201ENST00000528539 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
AP000435.1-201ENST00000528539 CHIC1Q5VXU3 224 aa13.55□□□□□ -0.24
AP000435.1-201ENST00000528539 CECR2Q9BXF3 1484 aa13.5□□□□□ -0.25
AP000435.1-201ENST00000528539 MROH2BQ7Z745 1585 aa13.44□□□□□ -0.26
AP000435.1-201ENST00000528539 BAZ1AQ9NRL2 1556 aaPredicted RBP13.37□□□□□ -0.27
AP000435.1-201ENST00000528539 BICRAQ9NZM4 1560 aa13.32□□□□□ -0.28
AP000435.1-201ENST00000528539 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
AP000435.1-201ENST00000528539 UNC13AQ9UPW8 1703 aa13.27□□□□□ -0.29
AP000435.1-201ENST00000528539 WIZO95785 1651 aa13.24□□□□□ -0.29
AP000435.1-201ENST00000528539 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
AP000435.1-201ENST00000528539 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
AP000435.1-201ENST00000528539 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
AP000435.1-201ENST00000528539 TRIM41Q8WV44 630 aa13.11□□□□□ -0.31
AP000435.1-201ENST00000528539 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
AP000435.1-201ENST00000528539 ATAD2BQ9ULI0 1458 aa13.06□□□□□ -0.32
AP000435.1-201ENST00000528539 SMARCA2P51531 1590 aa13.06□□□□□ -0.32
AP000435.1-201ENST00000528539 EIF4G1Q04637 1599 aaKnown RBP13.05□□□□□ -0.32
AP000435.1-201ENST00000528539 LOC105371045A0A1W2PR82 267 aa13.02□□□□□ -0.33
AP000435.1-201ENST00000528539 BAZ1BQ9UIG0 1483 aaKnown RBP12.94□□□□□ -0.34
AP000435.1-201ENST00000528539 NCAPD3P42695 1498 aa12.93□□□□□ -0.34
AP000435.1-201ENST00000528539 HMGXB3Q12766 1538 aa12.85□□□□□ -0.35
AP000435.1-201ENST00000528539 FAM9AQ8IZU1 332 aaPredicted RBP12.85□□□□□ -0.35
AP000435.1-201ENST00000528539 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
AP000435.1-201ENST00000528539 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
AP000435.1-201ENST00000528539 EEA1Q15075 1411 aa12.77□□□□□ -0.37
AP000435.1-201ENST00000528539 SOGA1O94964 1423 aa12.72□□□□□ -0.37
AP000435.1-201ENST00000528539 CSRNP3Q8WYN3 585 aa12.7□□□□□ -0.38
AP000435.1-201ENST00000528539 CFTRP13569 1480 aa12.7□□□□□ -0.38
AP000435.1-201ENST00000528539 SYNJ1O43426 1573 aa12.66□□□□□ -0.38
AP000435.1-201ENST00000528539 PCGF6Q9BYE7 350 aa12.65□□□□□ -0.38
AP000435.1-201ENST00000528539 RUSC2Q8N2Y8 1516 aa12.64□□□□□ -0.39
AP000435.1-201ENST00000528539 TNIKQ9UKE5 1360 aa12.64□□□□□ -0.39
AP000435.1-201ENST00000528539 TRIM26Q12899 539 aaPredicted RBP12.63□□□□□ -0.39
AP000435.1-201ENST00000528539 CADPSQ9ULU8 1353 aa12.62□□□□□ -0.39
AP000435.1-201ENST00000528539 EHMT2Q96KQ7 1210 aa12.61□□□□□ -0.39
AP000435.1-201ENST00000528539 CC2D2AQ9P2K1 1620 aa12.6□□□□□ -0.39
AP000435.1-201ENST00000528539 TOP2BQ02880 1626 aa12.59□□□□□ -0.39
AP000435.1-201ENST00000528539 GOLGA3Q08378 1498 aa12.56□□□□□ -0.4
AP000435.1-201ENST00000528539 HRCP23327 699 aa12.55□□□□□ -0.4
AP000435.1-201ENST00000528539 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
AP000435.1-201ENST00000528539 CUX1P39880 1505 aa12.54□□□□□ -0.4
AP000435.1-201ENST00000528539 BIVM-ERCC5R4GMW8 1640 aa12.54□□□□□ -0.4
AP000435.1-201ENST00000528539 CEP162Q5TB80 1403 aa12.53□□□□□ -0.4
AP000435.1-201ENST00000528539 UBTFP17480 764 aaKnown RBP12.5□□□□□ -0.41
AP000435.1-201ENST00000528539 KIF21BO75037 1637 aa12.5□□□□□ -0.41
AP000435.1-201ENST00000528539 PRXQ9BXM0 1461 aa12.46□□□□□ -0.42
AP000435.1-201ENST00000528539 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
AP000435.1-201ENST00000528539 RAPGEF2Q9Y4G8 1499 aa12.43□□□□□ -0.42
AP000435.1-201ENST00000528539 FANCD2Q9BXW9 1451 aa12.42□□□□□ -0.42
AP000435.1-201ENST00000528539 ERICH3Q5RHP9 1530 aa12.4□□□□□ -0.42
AP000435.1-201ENST00000528539 CLIP1P30622 1438 aa12.38□□□□□ -0.43
AP000435.1-201ENST00000528539 PRDM2Q13029 1718 aa12.38□□□□□ -0.43
AP000435.1-201ENST00000528539 IGF1RP08069 1367 aa12.38□□□□□ -0.43
AP000435.1-201ENST00000528539 FGD5Q6ZNL6 1462 aa12.35□□□□□ -0.43
AP000435.1-201ENST00000528539 DNAJC5BQ9UF47 199 aa12.35□□□□□ -0.43
AP000435.1-201ENST00000528539 CUX2O14529 1486 aa12.34□□□□□ -0.43
AP000435.1-201ENST00000528539 NESP48681 1621 aa12.34□□□□□ -0.43
AP000435.1-201ENST00000528539 LAMC3Q9Y6N6 1575 aa12.34□□□□□ -0.43
AP000435.1-201ENST00000528539 DNMBPQ6XZF7 1577 aa12.32□□□□□ -0.44
AP000435.1-201ENST00000528539 PPARGC1BQ86YN6 1023 aaKnown RBP12.32□□□□□ -0.44
AP000435.1-201ENST00000528539 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
AP000435.1-201ENST00000528539 VPS8Q8N3P4 1428 aa12.31□□□□□ -0.44
AP000435.1-201ENST00000528539 PDS5BQ9NTI5 1447 aa12.31□□□□□ -0.44
AP000435.1-201ENST00000528539 AEBP2Q6ZN18 517 aaPredicted RBP12.3□□□□□ -0.44
AP000435.1-201ENST00000528539 ABCA10Q8WWZ4 1543 aa12.29□□□□□ -0.44
AP000435.1-201ENST00000528539 CARMIL1Q5VZK9 1371 aa12.29□□□□□ -0.44
AP000435.1-201ENST00000528539 POLA1P09884 1462 aaPredicted RBP12.27□□□□□ -0.44
AP000435.1-201ENST00000528539 ZEB1P37275 1124 aaPredicted RBP12.27□□□□□ -0.45
AP000435.1-201ENST00000528539 URB2Q14146 1524 aaKnown RBP12.26□□□□□ -0.45
AP000435.1-201ENST00000528539 RAD54L2Q9Y4B4 1467 aa12.24□□□□□ -0.45
AP000435.1-201ENST00000528539 ARAP1Q96P48 1450 aa12.23□□□□□ -0.45
AP000435.1-201ENST00000528539 APLP2Q06481 763 aa12.18□□□□□ -0.46
AP000435.1-201ENST00000528539 ARHGAP35Q9NRY4 1499 aa12.18□□□□□ -0.46
AP000435.1-201ENST00000528539 RANGAP1P46060 587 aaPredicted RBP12.17□□□□□ -0.46
AP000435.1-201ENST00000528539 TTBK1Q5TCY1 1321 aaPredicted RBP12.13□□□□□ -0.47
AP000435.1-201ENST00000528539 TDRD9Q8NDG6 1382 aaKnown RBP12.12□□□□□ -0.47
AP000435.1-201ENST00000528539 MRC2Q9UBG0 1479 aa12.12□□□□□ -0.47
AP000435.1-201ENST00000528539 GAPVD1Q14C86 1478 aa12.11□□□□□ -0.47
AP000435.1-201ENST00000528539 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
AP000435.1-201ENST00000528539 ABCA5Q8WWZ7 1642 aa12.08□□□□□ -0.48
AP000435.1-201ENST00000528539 CUL7Q14999 1698 aa12.08□□□□□ -0.48
AP000435.1-201ENST00000528539 KANK4Q5T7N3 995 aaPredicted RBP12.08□□□□□ -0.48
AP000435.1-201ENST00000528539 MAP3K1Q13233 1512 aa12.07□□□□□ -0.48
AP000435.1-201ENST00000528539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
AP000435.1-201ENST00000528539 TARBP1Q13395 1621 aaKnown RBP12.06□□□□□ -0.48
AP000435.1-201ENST00000528539 KIF21AQ7Z4S6 1674 aa12.05□□□□□ -0.48
AP000435.1-201ENST00000528539 FHAD1B1AJZ9 1412 aa12.04□□□□□ -0.48
AP000435.1-201ENST00000528539 CCER1Q8TC90 406 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms