RNA–Protein interactions for RNA: ENST00000528000.1

AP006437.2-201, humanhuman

TSL 3 BASIC

Gene AP006437.2, Length 345 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP006437.2-201ENST00000528000 NISCHQ9Y2I1 1504 aa29■■■□□ 2.23
AP006437.2-201ENST00000528000 CCDC180Q9P1Z9 1646 aa25.56■■□□□ 1.68
AP006437.2-201ENST00000528000 ABCC9O60706 1549 aa25.05■■□□□ 1.6
AP006437.2-201ENST00000528000 DCAF8L2P0C7V8 631 aa24.59■■□□□ 1.53
AP006437.2-201ENST00000528000 ZCCHC6Q5VYS8 1495 aaKnown RBP24.13■■□□□ 1.45
AP006437.2-201ENST00000528000 NACADO15069 1562 aa24.12■■□□□ 1.45
AP006437.2-201ENST00000528000 RB1CC1Q8TDY2 1594 aa24.12■■□□□ 1.45
AP006437.2-201ENST00000528000 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
AP006437.2-201ENST00000528000 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
AP006437.2-201ENST00000528000 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.36
AP006437.2-201ENST00000528000 SCRIBQ14160 1630 aa23.46■■□□□ 1.35
AP006437.2-201ENST00000528000 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
AP006437.2-201ENST00000528000 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
AP006437.2-201ENST00000528000 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
AP006437.2-201ENST00000528000 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
AP006437.2-201ENST00000528000 EIF4G1Q04637 1599 aaKnown RBP22.68■■□□□ 1.22
AP006437.2-201ENST00000528000 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
AP006437.2-201ENST00000528000 CC2D2AQ9P2K1 1620 aa22.55■■□□□ 1.2
AP006437.2-201ENST00000528000 BAZ1AQ9NRL2 1556 aaPredicted RBP22.48■■□□□ 1.19
AP006437.2-201ENST00000528000 SMARCA4P51532 1647 aa22.4■■□□□ 1.18
AP006437.2-201ENST00000528000 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
AP006437.2-201ENST00000528000 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
AP006437.2-201ENST00000528000 SMARCA2P51531 1590 aa22.3■■□□□ 1.16
AP006437.2-201ENST00000528000 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
AP006437.2-201ENST00000528000 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
AP006437.2-201ENST00000528000 BAZ1BQ9UIG0 1483 aaKnown RBP22.2■■□□□ 1.14
AP006437.2-201ENST00000528000 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
AP006437.2-201ENST00000528000 SUPT5HO00267 1087 aaKnown RBP22.1■■□□□ 1.13
AP006437.2-201ENST00000528000 HMGXB3Q12766 1538 aa22.1■■□□□ 1.13
AP006437.2-201ENST00000528000 WIZO95785 1651 aa22.07■■□□□ 1.12
AP006437.2-201ENST00000528000 TOP2AP11388 1531 aaKnown RBP21.88■■□□□ 1.09
AP006437.2-201ENST00000528000 CADPSQ9ULU8 1353 aa21.72■■□□□ 1.07
AP006437.2-201ENST00000528000 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
AP006437.2-201ENST00000528000 NESP48681 1621 aa21.66■■□□□ 1.06
AP006437.2-201ENST00000528000 ERCC6Q03468 1493 aa21.65■■□□□ 1.06
AP006437.2-201ENST00000528000 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
AP006437.2-201ENST00000528000 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
AP006437.2-201ENST00000528000 CFTRP13569 1480 aa21.55■■□□□ 1.04
AP006437.2-201ENST00000528000 FANCD2Q9BXW9 1451 aa21.43■■□□□ 1.02
AP006437.2-201ENST00000528000 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
AP006437.2-201ENST00000528000 MRC2Q9UBG0 1479 aa21.29■■□□□ 1
AP006437.2-201ENST00000528000 KIF21AQ7Z4S6 1674 aa21.28■■□□□ 1
AP006437.2-201ENST00000528000 CUX2O14529 1486 aa21.21■□□□□ 0.99
AP006437.2-201ENST00000528000 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
AP006437.2-201ENST00000528000 PRDM2Q13029 1718 aa21.16■□□□□ 0.98
AP006437.2-201ENST00000528000 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.98
AP006437.2-201ENST00000528000 URB2Q14146 1524 aaKnown RBP21.13■□□□□ 0.97
AP006437.2-201ENST00000528000 WDR62O43379 1518 aa21.11■□□□□ 0.97
AP006437.2-201ENST00000528000 TOPBP1Q92547 1522 aa21.06■□□□□ 0.96
AP006437.2-201ENST00000528000 DNMBPQ6XZF7 1577 aa21.02■□□□□ 0.96
AP006437.2-201ENST00000528000 WRNQ14191 1432 aaPredicted RBP eCLIP21■□□□□ 0.95
AP006437.2-201ENST00000528000 SOGA1O94964 1423 aa20.95■□□□□ 0.95
AP006437.2-201ENST00000528000 CUX1P39880 1505 aa20.94■□□□□ 0.94
AP006437.2-201ENST00000528000 IFT140Q96RY7 1462 aa20.93■□□□□ 0.94
AP006437.2-201ENST00000528000 FGD5Q6ZNL6 1462 aa20.89■□□□□ 0.94
AP006437.2-201ENST00000528000 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
AP006437.2-201ENST00000528000 TRIM41Q8WV44 630 aa20.88■□□□□ 0.93
AP006437.2-201ENST00000528000 RAD54L2Q9Y4B4 1467 aa20.85■□□□□ 0.93
AP006437.2-201ENST00000528000 TDRD9Q8NDG6 1382 aaKnown RBP20.82■□□□□ 0.92
AP006437.2-201ENST00000528000 TOP2BQ02880 1626 aa20.8■□□□□ 0.92
AP006437.2-201ENST00000528000 SYNJ1O43426 1573 aa20.79■□□□□ 0.92
AP006437.2-201ENST00000528000 ZNF608Q9ULD9 1512 aaPredicted RBP20.77■□□□□ 0.92
AP006437.2-201ENST00000528000 AQRO60306 1485 aaKnown RBP eCLIP20.76■□□□□ 0.91
AP006437.2-201ENST00000528000 BIVM-ERCC5R4GMW8 1640 aa20.73■□□□□ 0.91
AP006437.2-201ENST00000528000 TARBP1Q13395 1621 aaKnown RBP20.72■□□□□ 0.91
AP006437.2-201ENST00000528000 FBLN2P98095 1184 aa20.71■□□□□ 0.91
AP006437.2-201ENST00000528000 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
AP006437.2-201ENST00000528000 GAPVD1Q14C86 1478 aa20.65■□□□□ 0.9
AP006437.2-201ENST00000528000 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
AP006437.2-201ENST00000528000 CHMP7Q8WUX9 453 aaPredicted RBP20.63■□□□□ 0.89
AP006437.2-201ENST00000528000 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
AP006437.2-201ENST00000528000 EIF4G3O43432 1585 aaKnown RBP20.61■□□□□ 0.89
AP006437.2-201ENST00000528000 OSCARQ8IYS5 282 aa20.61■□□□□ 0.89
AP006437.2-201ENST00000528000 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
AP006437.2-201ENST00000528000 WDR97A6NE52 1622 aa20.58■□□□□ 0.89
AP006437.2-201ENST00000528000 SNAPC4Q5SXM2 1469 aa20.51■□□□□ 0.87
AP006437.2-201ENST00000528000 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
AP006437.2-201ENST00000528000 DNAJC5Q9H3Z4 198 aa20.48■□□□□ 0.87
AP006437.2-201ENST00000528000 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
AP006437.2-201ENST00000528000 IGF1RP08069 1367 aa20.46■□□□□ 0.87
AP006437.2-201ENST00000528000 FAM9AQ8IZU1 332 aaPredicted RBP20.45■□□□□ 0.86
AP006437.2-201ENST00000528000 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
AP006437.2-201ENST00000528000 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
AP006437.2-201ENST00000528000 FHAD1B1AJZ9 1412 aa20.43■□□□□ 0.86
AP006437.2-201ENST00000528000 CSRNP3Q8WYN3 585 aa20.39■□□□□ 0.85
AP006437.2-201ENST00000528000 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
AP006437.2-201ENST00000528000 CARMIL1Q5VZK9 1371 aa20.38■□□□□ 0.85
AP006437.2-201ENST00000528000 RUSC2Q8N2Y8 1516 aa20.36■□□□□ 0.85
AP006437.2-201ENST00000528000 EEA1Q15075 1411 aa20.31■□□□□ 0.84
AP006437.2-201ENST00000528000 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
AP006437.2-201ENST00000528000 ADAMTS12P58397 1594 aa20.29■□□□□ 0.84
AP006437.2-201ENST00000528000 CHD1O14646 1710 aa20.27■□□□□ 0.84
AP006437.2-201ENST00000528000 CUL7Q14999 1698 aa20.25■□□□□ 0.83
AP006437.2-201ENST00000528000 RAPGEF2Q9Y4G8 1499 aa20.24■□□□□ 0.83
AP006437.2-201ENST00000528000 EHMT2Q96KQ7 1210 aa20.2■□□□□ 0.82
AP006437.2-201ENST00000528000 JPH4Q96JJ6 628 aa20.19■□□□□ 0.82
AP006437.2-201ENST00000528000 NUP160Q12769 1436 aa20.17■□□□□ 0.82
AP006437.2-201ENST00000528000 UBTFP17480 764 aaKnown RBP20.15■□□□□ 0.82
AP006437.2-201ENST00000528000 PRXQ9BXM0 1461 aa20.13■□□□□ 0.81
AP006437.2-201ENST00000528000 CEP170Q5SW79 1584 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms