RNA–Protein interactions for RNA: ENST00000527784.5

C11orf49-214, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 1,069 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-214ENST00000527784 NISCHQ9Y2I1 1504 aa33.99■■■■□ 3.03
C11orf49-214ENST00000527784 CCDC180Q9P1Z9 1646 aa29.91■■■□□ 2.38
C11orf49-214ENST00000527784 ABCC9O60706 1549 aa29.08■■■□□ 2.25
C11orf49-214ENST00000527784 DCAF8L2P0C7V8 631 aa28.39■■■□□ 2.14
C11orf49-214ENST00000527784 ZCCHC6Q5VYS8 1495 aaKnown RBP28.35■■■□□ 2.13
C11orf49-214ENST00000527784 NACADO15069 1562 aa28.17■■■□□ 2.1
C11orf49-214ENST00000527784 MYO15BQ96JP2 1530 aa28.16■■■□□ 2.1
C11orf49-214ENST00000527784 DCAF1Q9Y4B6 1507 aa28.14■■■□□ 2.1
C11orf49-214ENST00000527784 RB1CC1Q8TDY2 1594 aa28.08■■■□□ 2.09
C11orf49-214ENST00000527784 SCRIBQ14160 1630 aa27.35■■□□□ 1.97
C11orf49-214ENST00000527784 PABPN1Q86U42 306 aaKnown RBP eCLIP27.33■■□□□ 1.97
C11orf49-214ENST00000527784 UNC13AQ9UPW8 1703 aa27.21■■□□□ 1.95
C11orf49-214ENST00000527784 BICRAQ9NZM4 1560 aa27.19■■□□□ 1.94
C11orf49-214ENST00000527784 SHROOM4Q9ULL8 1493 aa27.07■■□□□ 1.92
C11orf49-214ENST00000527784 EIF4G1Q04637 1599 aaKnown RBP26.47■■□□□ 1.83
C11orf49-214ENST00000527784 DNAJC5BQ9UF47 199 aa26.47■■□□□ 1.83
C11orf49-214ENST00000527784 CECR2Q9BXF3 1484 aa26.44■■□□□ 1.82
C11orf49-214ENST00000527784 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
C11orf49-214ENST00000527784 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
C11orf49-214ENST00000527784 SMARCA4P51532 1647 aa26.21■■□□□ 1.79
C11orf49-214ENST00000527784 MROH2BQ7Z745 1585 aa26.18■■□□□ 1.78
C11orf49-214ENST00000527784 ATAD2BQ9ULI0 1458 aa26.1■■□□□ 1.77
C11orf49-214ENST00000527784 RSF1Q96T23 1441 aaPredicted RBP26.07■■□□□ 1.76
C11orf49-214ENST00000527784 NCAPD3P42695 1498 aa26.06■■□□□ 1.76
C11orf49-214ENST00000527784 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
C11orf49-214ENST00000527784 PEG3Q9GZU2 1588 aa25.99■■□□□ 1.75
C11orf49-214ENST00000527784 BAZ1BQ9UIG0 1483 aaKnown RBP25.87■■□□□ 1.73
C11orf49-214ENST00000527784 HMGXB3Q12766 1538 aa25.87■■□□□ 1.73
C11orf49-214ENST00000527784 WIZO95785 1651 aa25.82■■□□□ 1.72
C11orf49-214ENST00000527784 SUPT5HO00267 1087 aaKnown RBP25.72■■□□□ 1.71
C11orf49-214ENST00000527784 TOP2AP11388 1531 aaKnown RBP25.63■■□□□ 1.69
C11orf49-214ENST00000527784 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
C11orf49-214ENST00000527784 CADPSQ9ULU8 1353 aa25.35■■□□□ 1.65
C11orf49-214ENST00000527784 NESP48681 1621 aa25.24■■□□□ 1.63
C11orf49-214ENST00000527784 CFTRP13569 1480 aa25.22■■□□□ 1.63
C11orf49-214ENST00000527784 LAMC3Q9Y6N6 1575 aa25.22■■□□□ 1.63
C11orf49-214ENST00000527784 PDS5BQ9NTI5 1447 aa25.15■■□□□ 1.62
C11orf49-214ENST00000527784 ERCC6Q03468 1493 aa25.05■■□□□ 1.6
C11orf49-214ENST00000527784 DNAJC5Q9H3Z4 198 aa25.03■■□□□ 1.6
C11orf49-214ENST00000527784 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
C11orf49-214ENST00000527784 CEP164Q9UPV0 1460 aa24.9■■□□□ 1.58
C11orf49-214ENST00000527784 MRC2Q9UBG0 1479 aa24.8■■□□□ 1.56
C11orf49-214ENST00000527784 KIF21AQ7Z4S6 1674 aa24.78■■□□□ 1.56
C11orf49-214ENST00000527784 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
C11orf49-214ENST00000527784 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.54
C11orf49-214ENST00000527784 ABCC8Q09428 1581 aa24.68■■□□□ 1.54
C11orf49-214ENST00000527784 URB2Q14146 1524 aaKnown RBP24.68■■□□□ 1.54
C11orf49-214ENST00000527784 WDR62O43379 1518 aa24.67■■□□□ 1.54
C11orf49-214ENST00000527784 CUX2O14529 1486 aa24.67■■□□□ 1.54
C11orf49-214ENST00000527784 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
C11orf49-214ENST00000527784 WRNQ14191 1432 aaPredicted RBP eCLIP24.57■■□□□ 1.52
C11orf49-214ENST00000527784 DNMBPQ6XZF7 1577 aa24.57■■□□□ 1.52
C11orf49-214ENST00000527784 CUX1P39880 1505 aa24.52■■□□□ 1.52
C11orf49-214ENST00000527784 POLA1P09884 1462 aaPredicted RBP24.43■■□□□ 1.5
C11orf49-214ENST00000527784 SOGA1O94964 1423 aa24.41■■□□□ 1.5
C11orf49-214ENST00000527784 FGD5Q6ZNL6 1462 aa24.4■■□□□ 1.5
C11orf49-214ENST00000527784 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
C11orf49-214ENST00000527784 TOP2BQ02880 1626 aa24.38■■□□□ 1.49
C11orf49-214ENST00000527784 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
C11orf49-214ENST00000527784 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
C11orf49-214ENST00000527784 BIVM-ERCC5R4GMW8 1640 aa24.32■■□□□ 1.48
C11orf49-214ENST00000527784 TRIM41Q8WV44 630 aa24.31■■□□□ 1.48
C11orf49-214ENST00000527784 TARBP1Q13395 1621 aaKnown RBP24.24■■□□□ 1.47
C11orf49-214ENST00000527784 CHIC1Q5VXU3 224 aa24.23■■□□□ 1.47
C11orf49-214ENST00000527784 ZNF608Q9ULD9 1512 aaPredicted RBP24.23■■□□□ 1.47
C11orf49-214ENST00000527784 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
C11orf49-214ENST00000527784 ABCA10Q8WWZ4 1543 aa24.21■■□□□ 1.47
C11orf49-214ENST00000527784 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.46
C11orf49-214ENST00000527784 WDR97A6NE52 1622 aa24.1■■□□□ 1.45
C11orf49-214ENST00000527784 GAPVD1Q14C86 1478 aa24.09■■□□□ 1.45
C11orf49-214ENST00000527784 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
C11orf49-214ENST00000527784 GRIN2BQ13224 1484 aa24.05■■□□□ 1.44
C11orf49-214ENST00000527784 EIF4G3O43432 1585 aaKnown RBP24.04■■□□□ 1.44
C11orf49-214ENST00000527784 ABCA5Q8WWZ7 1642 aa23.98■■□□□ 1.43
C11orf49-214ENST00000527784 IGF1RP08069 1367 aa23.95■■□□□ 1.42
C11orf49-214ENST00000527784 SNAPC4Q5SXM2 1469 aa23.92■■□□□ 1.42
C11orf49-214ENST00000527784 MAGI1Q96QZ7 1491 aaPredicted RBP23.92■■□□□ 1.42
C11orf49-214ENST00000527784 ERICH3Q5RHP9 1530 aa23.91■■□□□ 1.42
C11orf49-214ENST00000527784 CHMP7Q8WUX9 453 aaPredicted RBP23.9■■□□□ 1.42
C11orf49-214ENST00000527784 FBLN2P98095 1184 aa23.88■■□□□ 1.41
C11orf49-214ENST00000527784 RUSC2Q8N2Y8 1516 aa23.88■■□□□ 1.41
C11orf49-214ENST00000527784 FHAD1B1AJZ9 1412 aa23.84■■□□□ 1.41
C11orf49-214ENST00000527784 EEA1Q15075 1411 aa23.84■■□□□ 1.41
C11orf49-214ENST00000527784 SYNJ2O15056 1496 aa23.83■■□□□ 1.41
C11orf49-214ENST00000527784 OSCARQ8IYS5 282 aa23.83■■□□□ 1.41
C11orf49-214ENST00000527784 CSRNP3Q8WYN3 585 aa23.81■■□□□ 1.4
C11orf49-214ENST00000527784 CARMIL1Q5VZK9 1371 aa23.8■■□□□ 1.4
C11orf49-214ENST00000527784 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
C11orf49-214ENST00000527784 FAM9AQ8IZU1 332 aaPredicted RBP23.76■■□□□ 1.39
C11orf49-214ENST00000527784 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
C11orf49-214ENST00000527784 GRIN2AQ12879 1464 aa23.7■■□□□ 1.38
C11orf49-214ENST00000527784 CUL7Q14999 1698 aa23.67■■□□□ 1.38
C11orf49-214ENST00000527784 PRXQ9BXM0 1461 aa23.66■■□□□ 1.38
C11orf49-214ENST00000527784 RAPGEF2Q9Y4G8 1499 aa23.65■■□□□ 1.38
C11orf49-214ENST00000527784 NUP160Q12769 1436 aa23.61■■□□□ 1.37
C11orf49-214ENST00000527784 CHD1O14646 1710 aa23.59■■□□□ 1.37
C11orf49-214ENST00000527784 CEP170Q5SW79 1584 aa23.5■■□□□ 1.35
C11orf49-214ENST00000527784 KIAA0586Q9BVV6 1533 aa23.49■■□□□ 1.35
C11orf49-214ENST00000527784 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
C11orf49-214ENST00000527784 JPH4Q96JJ6 628 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms