RNA–Protein interactions for RNA: ENST00000527574.1

AP003396.4-201, humanhuman

BASIC

Gene AP003396.4, Length 265 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003396.4-201ENST00000527574 AEBP2Q6ZN18 517 aaPredicted RBP15.82■□□□□ 0.12
AP003396.4-201ENST00000527574 CHIC1Q5VXU3 224 aa15.51■□□□□ 0.07
AP003396.4-201ENST00000527574 NISCHQ9Y2I1 1504 aa14.75□□□□□ -0.05
AP003396.4-201ENST00000527574 PHF23Q9BUL5 403 aaPredicted RBP13.64□□□□□ -0.23
AP003396.4-201ENST00000527574 SENP3Q9H4L4 574 aaPredicted RBP13.41□□□□□ -0.26
AP003396.4-201ENST00000527574 CCDC180Q9P1Z9 1646 aa13.26□□□□□ -0.29
AP003396.4-201ENST00000527574 ABCC9O60706 1549 aa13.06□□□□□ -0.32
AP003396.4-201ENST00000527574 PLPPR3Q6T4P5 718 aa12.62□□□□□ -0.39
AP003396.4-201ENST00000527574 RB1CC1Q8TDY2 1594 aa12.58□□□□□ -0.4
AP003396.4-201ENST00000527574 NACADO15069 1562 aa12.51□□□□□ -0.41
AP003396.4-201ENST00000527574 FOXD1Q16676 465 aa12.45□□□□□ -0.42
AP003396.4-201ENST00000527574 DCAF8L2P0C7V8 631 aa12.44□□□□□ -0.42
AP003396.4-201ENST00000527574 MYO15BQ96JP2 1530 aa12.38□□□□□ -0.43
AP003396.4-201ENST00000527574 ZCCHC6Q5VYS8 1495 aaKnown RBP12.25□□□□□ -0.45
AP003396.4-201ENST00000527574 DCAF1Q9Y4B6 1507 aa12.24□□□□□ -0.45
AP003396.4-201ENST00000527574 UNC13AQ9UPW8 1703 aa12.15□□□□□ -0.46
AP003396.4-201ENST00000527574 PABPN1Q86U42 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
AP003396.4-201ENST00000527574 SHROOM4Q9ULL8 1493 aa12.12□□□□□ -0.47
AP003396.4-201ENST00000527574 BICRAQ9NZM4 1560 aa12.05□□□□□ -0.48
AP003396.4-201ENST00000527574 SCRIBQ14160 1630 aa12.01□□□□□ -0.49
AP003396.4-201ENST00000527574 ADRA2BP18089 450 aa12.01□□□□□ -0.49
AP003396.4-201ENST00000527574 DNAJC5BQ9UF47 199 aa12.01□□□□□ -0.49
AP003396.4-201ENST00000527574 PPP6R1Q9UPN7 881 aa12.01□□□□□ -0.49
AP003396.4-201ENST00000527574 EIF4G1Q04637 1599 aaKnown RBP11.83□□□□□ -0.52
AP003396.4-201ENST00000527574 CC2D2AQ9P2K1 1620 aa11.81□□□□□ -0.52
AP003396.4-201ENST00000527574 CECR2Q9BXF3 1484 aa11.79□□□□□ -0.52
AP003396.4-201ENST00000527574 PIAS4Q8N2W9 510 aaPredicted RBP11.76□□□□□ -0.53
AP003396.4-201ENST00000527574 SMARCA2P51531 1590 aa11.52□□□□□ -0.57
AP003396.4-201ENST00000527574 BAZ1AQ9NRL2 1556 aaPredicted RBP11.51□□□□□ -0.57
AP003396.4-201ENST00000527574 NCAPD3P42695 1498 aa11.5□□□□□ -0.57
AP003396.4-201ENST00000527574 SMARCA4P51532 1647 aa11.49□□□□□ -0.57
AP003396.4-201ENST00000527574 HMGXB3Q12766 1538 aa11.46□□□□□ -0.57
AP003396.4-201ENST00000527574 ATAD2BQ9ULI0 1458 aa11.45□□□□□ -0.58
AP003396.4-201ENST00000527574 MSH5O43196 834 aa11.45□□□□□ -0.58
AP003396.4-201ENST00000527574 BAZ1BQ9UIG0 1483 aaKnown RBP11.42□□□□□ -0.58
AP003396.4-201ENST00000527574 PEG3Q9GZU2 1588 aa11.39□□□□□ -0.59
AP003396.4-201ENST00000527574 ERCC6Q03468 1493 aa11.38□□□□□ -0.59
AP003396.4-201ENST00000527574 MROH2BQ7Z745 1585 aa11.32□□□□□ -0.6
AP003396.4-201ENST00000527574 CUX2O14529 1486 aa11.3□□□□□ -0.6
AP003396.4-201ENST00000527574 LAMC3Q9Y6N6 1575 aa11.28□□□□□ -0.6
AP003396.4-201ENST00000527574 PDS5BQ9NTI5 1447 aa11.24□□□□□ -0.61
AP003396.4-201ENST00000527574 WIZO95785 1651 aa11.19□□□□□ -0.62
AP003396.4-201ENST00000527574 NESP48681 1621 aa11.19□□□□□ -0.62
AP003396.4-201ENST00000527574 CADPSQ9ULU8 1353 aa11.16□□□□□ -0.62
AP003396.4-201ENST00000527574 RSF1Q96T23 1441 aaPredicted RBP11.14□□□□□ -0.63
AP003396.4-201ENST00000527574 PPP4R3CPQ6ZMV5 832 aa11.13□□□□□ -0.63
AP003396.4-201ENST00000527574 TOP2AP11388 1531 aaKnown RBP11.13□□□□□ -0.63
AP003396.4-201ENST00000527574 THOC2Q8NI27 1593 aaKnown RBP11.11□□□□□ -0.63
AP003396.4-201ENST00000527574 KIF21AQ7Z4S6 1674 aa11.1□□□□□ -0.63
AP003396.4-201ENST00000527574 CEP164Q9UPV0 1460 aa11.08□□□□□ -0.64
AP003396.4-201ENST00000527574 DNAJC5Q9H3Z4 198 aa11.08□□□□□ -0.64
AP003396.4-201ENST00000527574 MRC2Q9UBG0 1479 aa11.07□□□□□ -0.64
AP003396.4-201ENST00000527574 CFTRP13569 1480 aa11.05□□□□□ -0.64
AP003396.4-201ENST00000527574 FANCD2Q9BXW9 1451 aa11.04□□□□□ -0.64
AP003396.4-201ENST00000527574 WDR62O43379 1518 aa11.02□□□□□ -0.65
AP003396.4-201ENST00000527574 PRDM2Q13029 1718 aa10.98□□□□□ -0.65
AP003396.4-201ENST00000527574 SCAF1Q9H7N4 1312 aaKnown RBP10.98□□□□□ -0.65
AP003396.4-201ENST00000527574 CCDC88BA6NC98 1476 aa10.95□□□□□ -0.66
AP003396.4-201ENST00000527574 KCNA4P22459 653 aa10.95□□□□□ -0.66
AP003396.4-201ENST00000527574 ABCC8Q09428 1581 aa10.93□□□□□ -0.66
AP003396.4-201ENST00000527574 URB2Q14146 1524 aaKnown RBP10.88□□□□□ -0.67
AP003396.4-201ENST00000527574 MAPK8IP2Q13387 824 aaPredicted RBP10.87□□□□□ -0.67
AP003396.4-201ENST00000527574 IFT140Q96RY7 1462 aa10.86□□□□□ -0.67
AP003396.4-201ENST00000527574 NCBP3Q53F19 620 aaKnown RBP10.85□□□□□ -0.67
AP003396.4-201ENST00000527574 DNMBPQ6XZF7 1577 aa10.83□□□□□ -0.68
AP003396.4-201ENST00000527574 TOPBP1Q92547 1522 aa10.82□□□□□ -0.68
AP003396.4-201ENST00000527574 OSCARQ8IYS5 282 aa10.8□□□□□ -0.68
AP003396.4-201ENST00000527574 CNKSR2Q8WXI2 1034 aa10.8□□□□□ -0.68
AP003396.4-201ENST00000527574 SUPT5HO00267 1087 aaKnown RBP10.77□□□□□ -0.69
AP003396.4-201ENST00000527574 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
AP003396.4-201ENST00000527574 WDR97A6NE52 1622 aa10.73□□□□□ -0.69
AP003396.4-201ENST00000527574 DMRT2Q9Y5R5 561 aa10.72□□□□□ -0.69
AP003396.4-201ENST00000527574 POLA1P09884 1462 aaPredicted RBP10.71□□□□□ -0.69
AP003396.4-201ENST00000527574 ZNF608Q9ULD9 1512 aaPredicted RBP10.71□□□□□ -0.69
AP003396.4-201ENST00000527574 SOGA1O94964 1423 aa10.7□□□□□ -0.7
AP003396.4-201ENST00000527574 NPM3O75607 178 aaKnown RBP10.7□□□□□ -0.7
AP003396.4-201ENST00000527574 TARBP1Q13395 1621 aaKnown RBP10.69□□□□□ -0.7
AP003396.4-201ENST00000527574 TRIM41Q8WV44 630 aa10.67□□□□□ -0.7
AP003396.4-201ENST00000527574 FGD5Q6ZNL6 1462 aa10.67□□□□□ -0.7
AP003396.4-201ENST00000527574 FBLN2P98095 1184 aa10.65□□□□□ -0.7
AP003396.4-201ENST00000527574 AQRO60306 1485 aaKnown RBP eCLIP10.65□□□□□ -0.7
AP003396.4-201ENST00000527574 CUX1P39880 1505 aa10.63□□□□□ -0.71
AP003396.4-201ENST00000527574 GRIN2BQ13224 1484 aa10.62□□□□□ -0.71
AP003396.4-201ENST00000527574 MAGI1Q96QZ7 1491 aaPredicted RBP10.62□□□□□ -0.71
AP003396.4-201ENST00000527574 RAD54L2Q9Y4B4 1467 aa10.62□□□□□ -0.71
AP003396.4-201ENST00000527574 TDRD9Q8NDG6 1382 aaKnown RBP10.62□□□□□ -0.71
AP003396.4-201ENST00000527574 CHMP7Q8WUX9 453 aaPredicted RBP10.61□□□□□ -0.71
AP003396.4-201ENST00000527574 WRNQ14191 1432 aaPredicted RBP eCLIP10.6□□□□□ -0.71
AP003396.4-201ENST00000527574 CHD1O14646 1710 aa10.6□□□□□ -0.71
AP003396.4-201ENST00000527574 SNAPC4Q5SXM2 1469 aa10.59□□□□□ -0.71
AP003396.4-201ENST00000527574 SYNJ1O43426 1573 aa10.58□□□□□ -0.72
AP003396.4-201ENST00000527574 GAPVD1Q14C86 1478 aa10.58□□□□□ -0.72
AP003396.4-201ENST00000527574 ABCA10Q8WWZ4 1543 aa10.58□□□□□ -0.72
AP003396.4-201ENST00000527574 SYNJ2O15056 1496 aa10.57□□□□□ -0.72
AP003396.4-201ENST00000527574 RNF216Q9NWF9 866 aaPredicted RBP10.57□□□□□ -0.72
AP003396.4-201ENST00000527574 RIMBP3CA6NJZ7 1639 aa10.57□□□□□ -0.72
AP003396.4-201ENST00000527574 RIMBP3BA6NNM3 1639 aa10.57□□□□□ -0.72
AP003396.4-201ENST00000527574 RIMBP3Q9UFD9 1639 aa10.57□□□□□ -0.72
AP003396.4-201ENST00000527574 ARHGEF11O15085 1522 aa10.57□□□□□ -0.72
AP003396.4-201ENST00000527574 TOP2BQ02880 1626 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 1390.5 ms