RNA–Protein interactions for RNA: ENST00000527129.1

CAPN5-204, Transcript of calpain 5, humanhuman

TSL 2

Gene CAPN5, Length 2,564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-204ENST00000527129 NISCHQ9Y2I1 1504 aa36.5■■■■□ 3.43
CAPN5-204ENST00000527129 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
CAPN5-204ENST00000527129 DCAF8L2P0C7V8 631 aa30.67■■■□□ 2.5
CAPN5-204ENST00000527129 ZCCHC6Q5VYS8 1495 aaKnown RBP30.6■■■□□ 2.49
CAPN5-204ENST00000527129 ABCC9O60706 1549 aa30.49■■■□□ 2.47
CAPN5-204ENST00000527129 SHROOM4Q9ULL8 1493 aa30.13■■■□□ 2.41
CAPN5-204ENST00000527129 DCAF1Q9Y4B6 1507 aa29.97■■■□□ 2.39
CAPN5-204ENST00000527129 MYO15BQ96JP2 1530 aa29.62■■■□□ 2.33
CAPN5-204ENST00000527129 NACADO15069 1562 aa29.61■■■□□ 2.33
CAPN5-204ENST00000527129 SCRIBQ14160 1630 aa29.44■■■□□ 2.3
CAPN5-204ENST00000527129 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
CAPN5-204ENST00000527129 SUPT5HO00267 1087 aaKnown RBP28.92■■■□□ 2.22
CAPN5-204ENST00000527129 UNC13AQ9UPW8 1703 aa28.88■■■□□ 2.21
CAPN5-204ENST00000527129 PABPN1Q86U42 306 aaKnown RBP eCLIP28.88■■■□□ 2.21
CAPN5-204ENST00000527129 BICRAQ9NZM4 1560 aa28.62■■■□□ 2.17
CAPN5-204ENST00000527129 CECR2Q9BXF3 1484 aa28.55■■■□□ 2.16
CAPN5-204ENST00000527129 RSF1Q96T23 1441 aaPredicted RBP28.36■■■□□ 2.13
CAPN5-204ENST00000527129 MROH2BQ7Z745 1585 aa28.3■■■□□ 2.12
CAPN5-204ENST00000527129 PELP1Q8IZL8 1130 aaKnown RBP28.23■■■□□ 2.11
CAPN5-204ENST00000527129 BAZ1AQ9NRL2 1556 aaPredicted RBP28.15■■■□□ 2.1
CAPN5-204ENST00000527129 SMARCA4P51532 1647 aa28.07■■■□□ 2.08
CAPN5-204ENST00000527129 WIZO95785 1651 aa28.07■■■□□ 2.08
CAPN5-204ENST00000527129 MYT1Q01538 1121 aa27.89■■■□□ 2.05
CAPN5-204ENST00000527129 EIF4G1Q04637 1599 aaKnown RBP27.78■■■□□ 2.04
CAPN5-204ENST00000527129 ATAD2BQ9ULI0 1458 aa27.7■■■□□ 2.02
CAPN5-204ENST00000527129 TOP2AP11388 1531 aaKnown RBP27.63■■■□□ 2.01
CAPN5-204ENST00000527129 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
CAPN5-204ENST00000527129 SMARCA2P51531 1590 aa27.57■■■□□ 2
CAPN5-204ENST00000527129 BAZ1BQ9UIG0 1483 aaKnown RBP27.55■■■□□ 2
CAPN5-204ENST00000527129 CCDC88BA6NC98 1476 aa27.49■■□□□ 1.99
CAPN5-204ENST00000527129 CHIC1Q5VXU3 224 aa27.46■■□□□ 1.99
CAPN5-204ENST00000527129 CC2D2AQ9P2K1 1620 aa27.44■■□□□ 1.98
CAPN5-204ENST00000527129 NCAPD3P42695 1498 aa27.4■■□□□ 1.98
CAPN5-204ENST00000527129 HMGXB3Q12766 1538 aa27.28■■□□□ 1.96
CAPN5-204ENST00000527129 DNAJC5BQ9UF47 199 aa27.14■■□□□ 1.94
CAPN5-204ENST00000527129 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
CAPN5-204ENST00000527129 ABCC8Q09428 1581 aa26.96■■□□□ 1.91
CAPN5-204ENST00000527129 TTBK1Q5TCY1 1321 aaPredicted RBP26.95■■□□□ 1.91
CAPN5-204ENST00000527129 CFTRP13569 1480 aa26.79■■□□□ 1.88
CAPN5-204ENST00000527129 CADPSQ9ULU8 1353 aa26.79■■□□□ 1.88
CAPN5-204ENST00000527129 FAM9AQ8IZU1 332 aaPredicted RBP26.77■■□□□ 1.88
CAPN5-204ENST00000527129 NESP48681 1621 aa26.74■■□□□ 1.87
CAPN5-204ENST00000527129 WRNQ14191 1432 aaPredicted RBP eCLIP26.69■■□□□ 1.86
CAPN5-204ENST00000527129 LOC105371045A0A1W2PR82 267 aa26.59■■□□□ 1.85
CAPN5-204ENST00000527129 SYNJ1O43426 1573 aa26.59■■□□□ 1.85
CAPN5-204ENST00000527129 EHMT2Q96KQ7 1210 aa26.58■■□□□ 1.85
CAPN5-204ENST00000527129 FANCD2Q9BXW9 1451 aa26.51■■□□□ 1.83
CAPN5-204ENST00000527129 PRDM2Q13029 1718 aa26.46■■□□□ 1.83
CAPN5-204ENST00000527129 PRKCSHP14314 528 aaPredicted RBP26.46■■□□□ 1.83
CAPN5-204ENST00000527129 SOGA1O94964 1423 aa26.45■■□□□ 1.82
CAPN5-204ENST00000527129 LAMC3Q9Y6N6 1575 aa26.45■■□□□ 1.82
CAPN5-204ENST00000527129 CUX1P39880 1505 aa26.44■■□□□ 1.82
CAPN5-204ENST00000527129 TOP2BQ02880 1626 aa26.38■■□□□ 1.81
CAPN5-204ENST00000527129 RUSC2Q8N2Y8 1516 aa26.38■■□□□ 1.81
CAPN5-204ENST00000527129 PDS5BQ9NTI5 1447 aa26.34■■□□□ 1.81
CAPN5-204ENST00000527129 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
CAPN5-204ENST00000527129 BIVM-ERCC5R4GMW8 1640 aa26.3■■□□□ 1.8
CAPN5-204ENST00000527129 KIF21AQ7Z4S6 1674 aa26.25■■□□□ 1.79
CAPN5-204ENST00000527129 CSRNP3Q8WYN3 585 aa26.19■■□□□ 1.78
CAPN5-204ENST00000527129 URB2Q14146 1524 aaKnown RBP26.19■■□□□ 1.78
CAPN5-204ENST00000527129 FGD5Q6ZNL6 1462 aa26.19■■□□□ 1.78
CAPN5-204ENST00000527129 TOPBP1Q92547 1522 aa26.18■■□□□ 1.78
CAPN5-204ENST00000527129 DNMBPQ6XZF7 1577 aa26.13■■□□□ 1.77
CAPN5-204ENST00000527129 RAD54L2Q9Y4B4 1467 aa26.1■■□□□ 1.77
CAPN5-204ENST00000527129 ERCC6Q03468 1493 aa26.09■■□□□ 1.77
CAPN5-204ENST00000527129 EEA1Q15075 1411 aa26.08■■□□□ 1.76
CAPN5-204ENST00000527129 POLA1P09884 1462 aaPredicted RBP26.07■■□□□ 1.76
CAPN5-204ENST00000527129 CUX2O14529 1486 aa26.04■■□□□ 1.76
CAPN5-204ENST00000527129 SLC24A1O60721 1099 aa26.02■■□□□ 1.76
CAPN5-204ENST00000527129 MRC2Q9UBG0 1479 aa26■■□□□ 1.75
CAPN5-204ENST00000527129 KIF27Q86VH2 1401 aa26■■□□□ 1.75
CAPN5-204ENST00000527129 UBTFP17480 764 aaKnown RBP25.98■■□□□ 1.75
CAPN5-204ENST00000527129 TDRD9Q8NDG6 1382 aaKnown RBP25.9■■□□□ 1.74
CAPN5-204ENST00000527129 APLP2Q06481 763 aa25.88■■□□□ 1.73
CAPN5-204ENST00000527129 RAPGEF2Q9Y4G8 1499 aa25.86■■□□□ 1.73
CAPN5-204ENST00000527129 ABCA10Q8WWZ4 1543 aa25.85■■□□□ 1.73
CAPN5-204ENST00000527129 IGF1RP08069 1367 aa25.84■■□□□ 1.73
CAPN5-204ENST00000527129 ERICH6Q7L0X2 663 aa25.84■■□□□ 1.73
CAPN5-204ENST00000527129 GOLGA3Q08378 1498 aa25.83■■□□□ 1.73
CAPN5-204ENST00000527129 RANGAP1P46060 587 aaPredicted RBP25.83■■□□□ 1.73
CAPN5-204ENST00000527129 WDR62O43379 1518 aa25.81■■□□□ 1.72
CAPN5-204ENST00000527129 THOC2Q8NI27 1593 aaKnown RBP25.78■■□□□ 1.72
CAPN5-204ENST00000527129 KIF21BO75037 1637 aa25.77■■□□□ 1.72
CAPN5-204ENST00000527129 PRXQ9BXM0 1461 aa25.76■■□□□ 1.71
CAPN5-204ENST00000527129 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
CAPN5-204ENST00000527129 TNIKQ9UKE5 1360 aa25.73■■□□□ 1.71
CAPN5-204ENST00000527129 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.71
CAPN5-204ENST00000527129 CARMIL1Q5VZK9 1371 aa25.72■■□□□ 1.71
CAPN5-204ENST00000527129 WDR97A6NE52 1622 aa25.7■■□□□ 1.71
CAPN5-204ENST00000527129 GAPVD1Q14C86 1478 aa25.69■■□□□ 1.7
CAPN5-204ENST00000527129 ZNF608Q9ULD9 1512 aaPredicted RBP25.68■■□□□ 1.7
CAPN5-204ENST00000527129 CEP162Q5TB80 1403 aa25.67■■□□□ 1.7
CAPN5-204ENST00000527129 HRCP23327 699 aa25.64■■□□□ 1.7
CAPN5-204ENST00000527129 IFT140Q96RY7 1462 aa25.64■■□□□ 1.69
CAPN5-204ENST00000527129 ABCA5Q8WWZ7 1642 aa25.62■■□□□ 1.69
CAPN5-204ENST00000527129 ERICH3Q5RHP9 1530 aa25.6■■□□□ 1.69
CAPN5-204ENST00000527129 BCL11AQ9H165 835 aa25.57■■□□□ 1.68
CAPN5-204ENST00000527129 CLIP1P30622 1438 aa25.5■■□□□ 1.67
CAPN5-204ENST00000527129 PPARGC1BQ86YN6 1023 aaKnown RBP25.5■■□□□ 1.67
CAPN5-204ENST00000527129 GRIN2BQ13224 1484 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms