RNA–Protein interactions for RNA: ENST00000526423.1

ARHGAP1-204, Transcript of Rho GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARHGAP1, Length 1,377 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP1-204ENST00000526423 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
ARHGAP1-204ENST00000526423 CCDC180Q9P1Z9 1646 aa23.97■■□□□ 1.43
ARHGAP1-204ENST00000526423 ABCC9O60706 1549 aa23.3■■□□□ 1.32
ARHGAP1-204ENST00000526423 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
ARHGAP1-204ENST00000526423 DCAF8L2P0C7V8 631 aa22.72■■□□□ 1.23
ARHGAP1-204ENST00000526423 NACADO15069 1562 aa22.52■■□□□ 1.2
ARHGAP1-204ENST00000526423 DCAF1Q9Y4B6 1507 aa22.48■■□□□ 1.19
ARHGAP1-204ENST00000526423 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
ARHGAP1-204ENST00000526423 MYO15BQ96JP2 1530 aa22.46■■□□□ 1.19
ARHGAP1-204ENST00000526423 SCRIBQ14160 1630 aa21.99■■□□□ 1.11
ARHGAP1-204ENST00000526423 UNC13AQ9UPW8 1703 aa21.92■■□□□ 1.1
ARHGAP1-204ENST00000526423 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
ARHGAP1-204ENST00000526423 BICRAQ9NZM4 1560 aa21.81■■□□□ 1.08
ARHGAP1-204ENST00000526423 SHROOM4Q9ULL8 1493 aa21.77■■□□□ 1.08
ARHGAP1-204ENST00000526423 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
ARHGAP1-204ENST00000526423 EIF4G1Q04637 1599 aaKnown RBP21.21■□□□□ 0.99
ARHGAP1-204ENST00000526423 DNAJC5BQ9UF47 199 aa21.18■□□□□ 0.98
ARHGAP1-204ENST00000526423 BAZ1AQ9NRL2 1556 aaPredicted RBP21.05■□□□□ 0.96
ARHGAP1-204ENST00000526423 CC2D2AQ9P2K1 1620 aa21.05■□□□□ 0.96
ARHGAP1-204ENST00000526423 SMARCA4P51532 1647 aa21.03■□□□□ 0.96
ARHGAP1-204ENST00000526423 MROH2BQ7Z745 1585 aa21■□□□□ 0.95
ARHGAP1-204ENST00000526423 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
ARHGAP1-204ENST00000526423 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
ARHGAP1-204ENST00000526423 SMARCA2P51531 1590 aa20.82■□□□□ 0.92
ARHGAP1-204ENST00000526423 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
ARHGAP1-204ENST00000526423 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
ARHGAP1-204ENST00000526423 WIZO95785 1651 aa20.77■□□□□ 0.91
ARHGAP1-204ENST00000526423 BAZ1BQ9UIG0 1483 aaKnown RBP20.71■□□□□ 0.91
ARHGAP1-204ENST00000526423 HMGXB3Q12766 1538 aa20.7■□□□□ 0.9
ARHGAP1-204ENST00000526423 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
ARHGAP1-204ENST00000526423 SUPT5HO00267 1087 aaKnown RBP20.63■□□□□ 0.89
ARHGAP1-204ENST00000526423 TOP2AP11388 1531 aaKnown RBP20.55■□□□□ 0.88
ARHGAP1-204ENST00000526423 CCDC88BA6NC98 1476 aa20.35■□□□□ 0.85
ARHGAP1-204ENST00000526423 CHIC1Q5VXU3 224 aa20.34■□□□□ 0.85
ARHGAP1-204ENST00000526423 NESP48681 1621 aa20.26■□□□□ 0.83
ARHGAP1-204ENST00000526423 CADPSQ9ULU8 1353 aa20.24■□□□□ 0.83
ARHGAP1-204ENST00000526423 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
ARHGAP1-204ENST00000526423 CFTRP13569 1480 aa20.17■□□□□ 0.82
ARHGAP1-204ENST00000526423 PDS5BQ9NTI5 1447 aa20.07■□□□□ 0.8
ARHGAP1-204ENST00000526423 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
ARHGAP1-204ENST00000526423 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
ARHGAP1-204ENST00000526423 KIF21AQ7Z4S6 1674 aa19.95■□□□□ 0.78
ARHGAP1-204ENST00000526423 CEP164Q9UPV0 1460 aa19.93■□□□□ 0.78
ARHGAP1-204ENST00000526423 PRDM2Q13029 1718 aa19.91■□□□□ 0.78
ARHGAP1-204ENST00000526423 MRC2Q9UBG0 1479 aa19.84■□□□□ 0.77
ARHGAP1-204ENST00000526423 THOC2Q8NI27 1593 aaKnown RBP19.82■□□□□ 0.76
ARHGAP1-204ENST00000526423 URB2Q14146 1524 aaKnown RBP19.78■□□□□ 0.76
ARHGAP1-204ENST00000526423 WDR62O43379 1518 aa19.75■□□□□ 0.75
ARHGAP1-204ENST00000526423 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
ARHGAP1-204ENST00000526423 ABCC8Q09428 1581 aa19.69■□□□□ 0.74
ARHGAP1-204ENST00000526423 CUX2O14529 1486 aa19.69■□□□□ 0.74
ARHGAP1-204ENST00000526423 DNMBPQ6XZF7 1577 aa19.68■□□□□ 0.74
ARHGAP1-204ENST00000526423 CUX1P39880 1505 aa19.68■□□□□ 0.74
ARHGAP1-204ENST00000526423 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.74
ARHGAP1-204ENST00000526423 SYNJ1O43426 1573 aa19.59■□□□□ 0.73
ARHGAP1-204ENST00000526423 POLA1P09884 1462 aaPredicted RBP19.57■□□□□ 0.72
ARHGAP1-204ENST00000526423 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
ARHGAP1-204ENST00000526423 TOP2BQ02880 1626 aa19.55■□□□□ 0.72
ARHGAP1-204ENST00000526423 BIVM-ERCC5R4GMW8 1640 aa19.52■□□□□ 0.72
ARHGAP1-204ENST00000526423 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
ARHGAP1-204ENST00000526423 SOGA1O94964 1423 aa19.51■□□□□ 0.71
ARHGAP1-204ENST00000526423 IFT140Q96RY7 1462 aa19.5■□□□□ 0.71
ARHGAP1-204ENST00000526423 TRIM41Q8WV44 630 aa19.44■□□□□ 0.7
ARHGAP1-204ENST00000526423 TARBP1Q13395 1621 aaKnown RBP19.44■□□□□ 0.7
ARHGAP1-204ENST00000526423 ZNF608Q9ULD9 1512 aaPredicted RBP19.43■□□□□ 0.7
ARHGAP1-204ENST00000526423 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.69
ARHGAP1-204ENST00000526423 ABCA10Q8WWZ4 1543 aa19.37■□□□□ 0.69
ARHGAP1-204ENST00000526423 AQRO60306 1485 aaKnown RBP eCLIP19.37■□□□□ 0.69
ARHGAP1-204ENST00000526423 WDR97A6NE52 1622 aa19.32■□□□□ 0.68
ARHGAP1-204ENST00000526423 EIF4G3O43432 1585 aaKnown RBP19.31■□□□□ 0.68
ARHGAP1-204ENST00000526423 GAPVD1Q14C86 1478 aa19.27■□□□□ 0.68
ARHGAP1-204ENST00000526423 ABCA5Q8WWZ7 1642 aa19.24■□□□□ 0.67
ARHGAP1-204ENST00000526423 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
ARHGAP1-204ENST00000526423 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
ARHGAP1-204ENST00000526423 RUSC2Q8N2Y8 1516 aa19.18■□□□□ 0.66
ARHGAP1-204ENST00000526423 SNAPC4Q5SXM2 1469 aa19.16■□□□□ 0.66
ARHGAP1-204ENST00000526423 PBRM1Q86U86 1689 aa19.14■□□□□ 0.65
ARHGAP1-204ENST00000526423 IGF1RP08069 1367 aa19.14■□□□□ 0.65
ARHGAP1-204ENST00000526423 ERICH3Q5RHP9 1530 aa19.13■□□□□ 0.65
ARHGAP1-204ENST00000526423 MAGI1Q96QZ7 1491 aaPredicted RBP19.12■□□□□ 0.65
ARHGAP1-204ENST00000526423 FBLN2P98095 1184 aa19.1■□□□□ 0.65
ARHGAP1-204ENST00000526423 FAM9AQ8IZU1 332 aaPredicted RBP19.08■□□□□ 0.65
ARHGAP1-204ENST00000526423 CHMP7Q8WUX9 453 aaPredicted RBP19.07■□□□□ 0.64
ARHGAP1-204ENST00000526423 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
ARHGAP1-204ENST00000526423 SYNJ2O15056 1496 aa19.05■□□□□ 0.64
ARHGAP1-204ENST00000526423 ADAMTS12P58397 1594 aa19.04■□□□□ 0.64
ARHGAP1-204ENST00000526423 EEA1Q15075 1411 aa19.02■□□□□ 0.64
ARHGAP1-204ENST00000526423 CARMIL1Q5VZK9 1371 aa19.02■□□□□ 0.64
ARHGAP1-204ENST00000526423 CSRNP3Q8WYN3 585 aa19.02■□□□□ 0.64
ARHGAP1-204ENST00000526423 OSCARQ8IYS5 282 aa18.98■□□□□ 0.63
ARHGAP1-204ENST00000526423 CUL7Q14999 1698 aa18.98■□□□□ 0.63
ARHGAP1-204ENST00000526423 CHD1O14646 1710 aa18.98■□□□□ 0.63
ARHGAP1-204ENST00000526423 GRIN2AQ12879 1464 aa18.97■□□□□ 0.63
ARHGAP1-204ENST00000526423 PRXQ9BXM0 1461 aa18.93■□□□□ 0.62
ARHGAP1-204ENST00000526423 RAPGEF2Q9Y4G8 1499 aa18.92■□□□□ 0.62
ARHGAP1-204ENST00000526423 NUP160Q12769 1436 aa18.87■□□□□ 0.61
ARHGAP1-204ENST00000526423 CEP170Q5SW79 1584 aa18.86■□□□□ 0.61
ARHGAP1-204ENST00000526423 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
ARHGAP1-204ENST00000526423 CLASP1Q7Z460 1538 aa18.82■□□□□ 0.6
ARHGAP1-204ENST00000526423 DNAJC5Q9H3Z4 198 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms