RNA–Protein interactions for RNA: ENST00000526124.1

LTBP3-205, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-205ENST00000526124 NISCHQ9Y2I1 1504 aa39.21■■■■□ 3.87
LTBP3-205ENST00000526124 CCDC180Q9P1Z9 1646 aa34.52■■■■□ 3.12
LTBP3-205ENST00000526124 ABCC9O60706 1549 aa33.43■■■□□ 2.94
LTBP3-205ENST00000526124 DCAF8L2P0C7V8 631 aa32.75■■■□□ 2.83
LTBP3-205ENST00000526124 ZCCHC6Q5VYS8 1495 aaKnown RBP32.71■■■□□ 2.83
LTBP3-205ENST00000526124 DCAF1Q9Y4B6 1507 aa32.44■■■□□ 2.78
LTBP3-205ENST00000526124 NACADO15069 1562 aa32.43■■■□□ 2.78
LTBP3-205ENST00000526124 MYO15BQ96JP2 1530 aa32.4■■■□□ 2.78
LTBP3-205ENST00000526124 RB1CC1Q8TDY2 1594 aa32.32■■■□□ 2.77
LTBP3-205ENST00000526124 SCRIBQ14160 1630 aa31.57■■■□□ 2.64
LTBP3-205ENST00000526124 UNC13AQ9UPW8 1703 aa31.54■■■□□ 2.64
LTBP3-205ENST00000526124 PABPN1Q86U42 306 aaKnown RBP eCLIP31.44■■■□□ 2.621e-8■■■□□ 16.8
LTBP3-205ENST00000526124 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
LTBP3-205ENST00000526124 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
LTBP3-205ENST00000526124 CECR2Q9BXF3 1484 aa30.53■■■□□ 2.48
LTBP3-205ENST00000526124 EIF4G1Q04637 1599 aaKnown RBP30.46■■■□□ 2.47
LTBP3-205ENST00000526124 DNAJC5BQ9UF47 199 aa30.4■■■□□ 2.46
LTBP3-205ENST00000526124 BAZ1AQ9NRL2 1556 aaPredicted RBP30.32■■■□□ 2.44
LTBP3-205ENST00000526124 SMARCA4P51532 1647 aa30.26■■■□□ 2.44
LTBP3-205ENST00000526124 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
LTBP3-205ENST00000526124 CC2D2AQ9P2K1 1620 aa30.22■■■□□ 2.43
LTBP3-205ENST00000526124 RSF1Q96T23 1441 aaPredicted RBP30.12■■■□□ 2.41
LTBP3-205ENST00000526124 ATAD2BQ9ULI0 1458 aa30.05■■■□□ 2.4
LTBP3-205ENST00000526124 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
LTBP3-205ENST00000526124 SMARCA2P51531 1590 aa29.98■■■□□ 2.39
LTBP3-205ENST00000526124 PEG3Q9GZU2 1588 aa29.97■■■□□ 2.39
LTBP3-205ENST00000526124 WIZO95785 1651 aa29.9■■■□□ 2.38
LTBP3-205ENST00000526124 SUPT5HO00267 1087 aaKnown RBP29.81■■■□□ 2.36
LTBP3-205ENST00000526124 BAZ1BQ9UIG0 1483 aaKnown RBP29.79■■■□□ 2.36
LTBP3-205ENST00000526124 HMGXB3Q12766 1538 aa29.77■■■□□ 2.36
LTBP3-205ENST00000526124 TOP2AP11388 1531 aaKnown RBP29.58■■■□□ 2.33
LTBP3-205ENST00000526124 CCDC88BA6NC98 1476 aa29.34■■■□□ 2.29
LTBP3-205ENST00000526124 CADPSQ9ULU8 1353 aa29.15■■■□□ 2.26
LTBP3-205ENST00000526124 NESP48681 1621 aa29.09■■■□□ 2.25
LTBP3-205ENST00000526124 CFTRP13569 1480 aa29.04■■■□□ 2.24
LTBP3-205ENST00000526124 LAMC3Q9Y6N6 1575 aa29.03■■■□□ 2.24
LTBP3-205ENST00000526124 PDS5BQ9NTI5 1447 aa28.89■■■□□ 2.22
LTBP3-205ENST00000526124 FANCD2Q9BXW9 1451 aa28.76■■■□□ 2.19
LTBP3-205ENST00000526124 ERCC6Q03468 1493 aa28.75■■■□□ 2.19
LTBP3-205ENST00000526124 PRDM2Q13029 1718 aa28.69■■■□□ 2.18
LTBP3-205ENST00000526124 KIF21AQ7Z4S6 1674 aa28.66■■■□□ 2.18
LTBP3-205ENST00000526124 CEP164Q9UPV0 1460 aa28.65■■■□□ 2.18
LTBP3-205ENST00000526124 MRC2Q9UBG0 1479 aa28.51■■■□□ 2.15
LTBP3-205ENST00000526124 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
LTBP3-205ENST00000526124 THOC2Q8NI27 1593 aaKnown RBP28.42■■■□□ 2.14
LTBP3-205ENST00000526124 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
LTBP3-205ENST00000526124 WDR62O43379 1518 aa28.36■■■□□ 2.13
LTBP3-205ENST00000526124 TOPBP1Q92547 1522 aa28.35■■■□□ 2.13
LTBP3-205ENST00000526124 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
LTBP3-205ENST00000526124 DNMBPQ6XZF7 1577 aa28.32■■■□□ 2.12
LTBP3-205ENST00000526124 CUX1P39880 1505 aa28.31■■■□□ 2.12
LTBP3-205ENST00000526124 CUX2O14529 1486 aa28.26■■■□□ 2.11
LTBP3-205ENST00000526124 SYNJ1O43426 1573 aa28.18■■■□□ 2.1
LTBP3-205ENST00000526124 TOP2BQ02880 1626 aa28.18■■■□□ 2.1
LTBP3-205ENST00000526124 CHIC1Q5VXU3 224 aa28.14■■■□□ 2.1
LTBP3-205ENST00000526124 TRIM41Q8WV44 630 aa28.14■■■□□ 2.1
LTBP3-205ENST00000526124 POLA1P09884 1462 aaPredicted RBP28.14■■■□□ 2.09
LTBP3-205ENST00000526124 FGD5Q6ZNL6 1462 aa28.14■■■□□ 2.09
LTBP3-205ENST00000526124 BIVM-ERCC5R4GMW8 1640 aa28.14■■■□□ 2.09
LTBP3-205ENST00000526124 SOGA1O94964 1423 aa28.11■■■□□ 2.09
LTBP3-205ENST00000526124 IFT140Q96RY7 1462 aa28.06■■■□□ 2.08
LTBP3-205ENST00000526124 RAD54L2Q9Y4B4 1467 aa28.06■■■□□ 2.08
LTBP3-205ENST00000526124 TARBP1Q13395 1621 aaKnown RBP27.98■■■□□ 2.07
LTBP3-205ENST00000526124 TDRD9Q8NDG6 1382 aaKnown RBP27.9■■■□□ 2.06
LTBP3-205ENST00000526124 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
LTBP3-205ENST00000526124 ABCA10Q8WWZ4 1543 aa27.89■■■□□ 2.06
LTBP3-205ENST00000526124 AQRO60306 1485 aaKnown RBP eCLIP27.86■■■□□ 2.056e-7■■■□□ 15.2
LTBP3-205ENST00000526124 WDR97A6NE52 1622 aa27.78■■■□□ 2.04
LTBP3-205ENST00000526124 GAPVD1Q14C86 1478 aa27.75■■■□□ 2.03
LTBP3-205ENST00000526124 KIF27Q86VH2 1401 aa27.73■■■□□ 2.03
LTBP3-205ENST00000526124 EIF4G3O43432 1585 aaKnown RBP27.7■■■□□ 2.03
LTBP3-205ENST00000526124 ABCA5Q8WWZ7 1642 aa27.67■■■□□ 2.02
LTBP3-205ENST00000526124 RUSC2Q8N2Y8 1516 aa27.67■■■□□ 2.02
LTBP3-205ENST00000526124 GRIN2BQ13224 1484 aa27.66■■■□□ 2.02
LTBP3-205ENST00000526124 IGF1RP08069 1367 aa27.63■■■□□ 2.01
LTBP3-205ENST00000526124 ERICH3Q5RHP9 1530 aa27.56■■■□□ 2
LTBP3-205ENST00000526124 FAM9AQ8IZU1 332 aaPredicted RBP27.54■■■□□ 2
LTBP3-205ENST00000526124 CSRNP3Q8WYN3 585 aa27.54■■■□□ 2
LTBP3-205ENST00000526124 PBRM1Q86U86 1689 aa27.52■■■□□ 2
LTBP3-205ENST00000526124 SNAPC4Q5SXM2 1469 aa27.52■■■□□ 2
LTBP3-205ENST00000526124 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■□□□ 1.99
LTBP3-205ENST00000526124 EEA1Q15075 1411 aa27.5■■□□□ 1.99
LTBP3-205ENST00000526124 FBLN2P98095 1184 aa27.49■■□□□ 1.99
LTBP3-205ENST00000526124 CHMP7Q8WUX9 453 aaPredicted RBP27.48■■□□□ 1.99
LTBP3-205ENST00000526124 FHAD1B1AJZ9 1412 aa27.45■■□□□ 1.98
LTBP3-205ENST00000526124 CARMIL1Q5VZK9 1371 aa27.45■■□□□ 1.98
LTBP3-205ENST00000526124 SYNJ2O15056 1496 aa27.41■■□□□ 1.98
LTBP3-205ENST00000526124 ADAMTS12P58397 1594 aa27.35■■□□□ 1.97
LTBP3-205ENST00000526124 OSCARQ8IYS5 282 aa27.35■■□□□ 1.97
LTBP3-205ENST00000526124 CUL7Q14999 1698 aa27.34■■□□□ 1.97
LTBP3-205ENST00000526124 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
LTBP3-205ENST00000526124 GRIN2AQ12879 1464 aa27.29■■□□□ 1.96
LTBP3-205ENST00000526124 RAPGEF2Q9Y4G8 1499 aa27.29■■□□□ 1.96
LTBP3-205ENST00000526124 CHD1O14646 1710 aa27.26■■□□□ 1.95
LTBP3-205ENST00000526124 NUP160Q12769 1436 aa27.16■■□□□ 1.94
LTBP3-205ENST00000526124 EHMT2Q96KQ7 1210 aa27.14■■□□□ 1.94
LTBP3-205ENST00000526124 KIF21BO75037 1637 aa27.12■■□□□ 1.93
LTBP3-205ENST00000526124 CEP170Q5SW79 1584 aa27.1■■□□□ 1.93
LTBP3-205ENST00000526124 UBTFP17480 764 aaKnown RBP27.07■■□□□ 1.92
LTBP3-205ENST00000526124 KIAA0586Q9BVV6 1533 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms