RNA–Protein interactions for RNA: ENST00000525802.1

KCNC1-203, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 4

Gene KCNC1, Length 525 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-203ENST00000525802 NISCHQ9Y2I1 1504 aa31.75■■■□□ 2.67
KCNC1-203ENST00000525802 ABCC9O60706 1549 aa30.09■■■□□ 2.41
KCNC1-203ENST00000525802 DNAJC5BQ9UF47 199 aa29.49■■■□□ 2.31
KCNC1-203ENST00000525802 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
KCNC1-203ENST00000525802 DNAJC5Q9H3Z4 198 aa28.17■■■□□ 2.1
KCNC1-203ENST00000525802 RB1CC1Q8TDY2 1594 aa27.9■■■□□ 2.06
KCNC1-203ENST00000525802 PABPN1Q86U42 306 aaKnown RBP eCLIP27.9■■■□□ 2.06
KCNC1-203ENST00000525802 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
KCNC1-203ENST00000525802 NACADO15069 1562 aa27.34■■□□□ 1.97
KCNC1-203ENST00000525802 CECR2Q9BXF3 1484 aa27.24■■□□□ 1.95
KCNC1-203ENST00000525802 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
KCNC1-203ENST00000525802 UNC13AQ9UPW8 1703 aa27.01■■□□□ 1.91
KCNC1-203ENST00000525802 CC2D2AQ9P2K1 1620 aa26.98■■□□□ 1.91
KCNC1-203ENST00000525802 MYO15BQ96JP2 1530 aa26.68■■□□□ 1.86
KCNC1-203ENST00000525802 EIF4G1Q04637 1599 aaKnown RBP26.57■■□□□ 1.84
KCNC1-203ENST00000525802 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
KCNC1-203ENST00000525802 TRIM41Q8WV44 630 aa26.52■■□□□ 1.84
KCNC1-203ENST00000525802 CUX2O14529 1486 aa26.44■■□□□ 1.82
KCNC1-203ENST00000525802 DCAF1Q9Y4B6 1507 aa26.37■■□□□ 1.81
KCNC1-203ENST00000525802 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
KCNC1-203ENST00000525802 ERCC6Q03468 1493 aa26.15■■□□□ 1.78
KCNC1-203ENST00000525802 SCRIBQ14160 1630 aa26.01■■□□□ 1.75
KCNC1-203ENST00000525802 AEBP2Q6ZN18 517 aaPredicted RBP25.39■■□□□ 1.66
KCNC1-203ENST00000525802 NESP48681 1621 aa25.37■■□□□ 1.65
KCNC1-203ENST00000525802 NCAPD3P42695 1498 aa25.29■■□□□ 1.64
KCNC1-203ENST00000525802 THOC2Q8NI27 1593 aaKnown RBP25.26■■□□□ 1.63
KCNC1-203ENST00000525802 OSCARQ8IYS5 282 aa25.2■■□□□ 1.62
KCNC1-203ENST00000525802 SMARCA2P51531 1590 aa25.15■■□□□ 1.62
KCNC1-203ENST00000525802 TRHP20396 242 aaPredicted RBP25.03■■□□□ 1.6
KCNC1-203ENST00000525802 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
KCNC1-203ENST00000525802 PDS5BQ9NTI5 1447 aa24.97■■□□□ 1.59
KCNC1-203ENST00000525802 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
KCNC1-203ENST00000525802 LAMC3Q9Y6N6 1575 aa24.92■■□□□ 1.58
KCNC1-203ENST00000525802 HMGXB3Q12766 1538 aa24.9■■□□□ 1.58
KCNC1-203ENST00000525802 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
KCNC1-203ENST00000525802 RIMBP3CA6NJZ7 1639 aa24.78■■□□□ 1.56
KCNC1-203ENST00000525802 RIMBP3BA6NNM3 1639 aa24.78■■□□□ 1.56
KCNC1-203ENST00000525802 RIMBP3Q9UFD9 1639 aa24.78■■□□□ 1.56
KCNC1-203ENST00000525802 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
KCNC1-203ENST00000525802 MRC2Q9UBG0 1479 aa24.76■■□□□ 1.55
KCNC1-203ENST00000525802 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
KCNC1-203ENST00000525802 CYB5RLQ6IPT4 315 aa24.75■■□□□ 1.55
KCNC1-203ENST00000525802 WDR62O43379 1518 aa24.65■■□□□ 1.54
KCNC1-203ENST00000525802 ARHGEF11O15085 1522 aa24.61■■□□□ 1.53
KCNC1-203ENST00000525802 PEG3Q9GZU2 1588 aa24.59■■□□□ 1.53
KCNC1-203ENST00000525802 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
KCNC1-203ENST00000525802 ILDR1Q86SU0 546 aaPredicted RBP24.41■■□□□ 1.5
KCNC1-203ENST00000525802 CEP164Q9UPV0 1460 aa24.4■■□□□ 1.5
KCNC1-203ENST00000525802 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
KCNC1-203ENST00000525802 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
KCNC1-203ENST00000525802 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
KCNC1-203ENST00000525802 WIZO95785 1651 aa24.11■■□□□ 1.45
KCNC1-203ENST00000525802 URB2Q14146 1524 aaKnown RBP24.06■■□□□ 1.44
KCNC1-203ENST00000525802 FBLN2P98095 1184 aa24.06■■□□□ 1.44
KCNC1-203ENST00000525802 ZNF608Q9ULD9 1512 aaPredicted RBP24.04■■□□□ 1.44
KCNC1-203ENST00000525802 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
KCNC1-203ENST00000525802 IFT140Q96RY7 1462 aa23.95■■□□□ 1.42
KCNC1-203ENST00000525802 TOP2AP11388 1531 aaKnown RBP23.92■■□□□ 1.42
KCNC1-203ENST00000525802 CFTRP13569 1480 aa23.88■■□□□ 1.41
KCNC1-203ENST00000525802 CHD1O14646 1710 aa23.78■■□□□ 1.4
KCNC1-203ENST00000525802 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
KCNC1-203ENST00000525802 EIF4G3O43432 1585 aaKnown RBP23.75■■□□□ 1.39
KCNC1-203ENST00000525802 AQRO60306 1485 aaKnown RBP eCLIP23.71■■□□□ 1.39
KCNC1-203ENST00000525802 KDM4FA0A1W2PPD8 638 aa23.59■■□□□ 1.37
KCNC1-203ENST00000525802 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
KCNC1-203ENST00000525802 TOPBP1Q92547 1522 aa23.57■■□□□ 1.36
KCNC1-203ENST00000525802 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
KCNC1-203ENST00000525802 GAPVD1Q14C86 1478 aa23.54■■□□□ 1.36
KCNC1-203ENST00000525802 CLASP1Q7Z460 1538 aa23.51■■□□□ 1.35
KCNC1-203ENST00000525802 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
KCNC1-203ENST00000525802 ABCC8Q09428 1581 aa23.47■■□□□ 1.35
KCNC1-203ENST00000525802 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
KCNC1-203ENST00000525802 SNAPC4Q5SXM2 1469 aa23.38■■□□□ 1.33
KCNC1-203ENST00000525802 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
KCNC1-203ENST00000525802 DNMBPQ6XZF7 1577 aa23.32■■□□□ 1.32
KCNC1-203ENST00000525802 FBXO41Q8TF61 875 aa23.31■■□□□ 1.32
KCNC1-203ENST00000525802 FAM69CQ0P6D2 419 aa23.27■■□□□ 1.32
KCNC1-203ENST00000525802 POLA1P09884 1462 aaPredicted RBP23.24■■□□□ 1.31
KCNC1-203ENST00000525802 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
KCNC1-203ENST00000525802 SOGA1O94964 1423 aa23.23■■□□□ 1.31
KCNC1-203ENST00000525802 MAGI1Q96QZ7 1491 aaPredicted RBP23.23■■□□□ 1.31
KCNC1-203ENST00000525802 SYNJ2O15056 1496 aa23.2■■□□□ 1.3
KCNC1-203ENST00000525802 ERCC6L2Q5T890 1561 aa23.19■■□□□ 1.3
KCNC1-203ENST00000525802 KIF13AQ9H1H9 1805 aa23.14■■□□□ 1.29
KCNC1-203ENST00000525802 GRIN2BQ13224 1484 aa23.13■■□□□ 1.29
KCNC1-203ENST00000525802 LMTK3Q96Q04 1460 aa23.13■■□□□ 1.29
KCNC1-203ENST00000525802 HECW2Q9P2P5 1572 aa23.1■■□□□ 1.29
KCNC1-203ENST00000525802 KDM6BO15054 1643 aa23.1■■□□□ 1.29
KCNC1-203ENST00000525802 NPM1P06748 294 aaKnown RBP eCLIP23.09■■□□□ 1.29
KCNC1-203ENST00000525802 WDR97A6NE52 1622 aa23.08■■□□□ 1.28
KCNC1-203ENST00000525802 ABCC10Q5T3U5 1492 aa23.04■■□□□ 1.28
KCNC1-203ENST00000525802 ADGRL1O94910 1474 aa23.01■■□□□ 1.27
KCNC1-203ENST00000525802 SOCS7O14512 581 aa22.98■■□□□ 1.27
KCNC1-203ENST00000525802 CEP170Q5SW79 1584 aa22.93■■□□□ 1.26
KCNC1-203ENST00000525802 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
KCNC1-203ENST00000525802 CUX1P39880 1505 aa22.92■■□□□ 1.26
KCNC1-203ENST00000525802 SUPT5HO00267 1087 aaKnown RBP22.87■■□□□ 1.25
KCNC1-203ENST00000525802 DIP2BQ9P265 1576 aa22.84■■□□□ 1.25
KCNC1-203ENST00000525802 ILDR2Q71H61 639 aa22.83■■□□□ 1.25
KCNC1-203ENST00000525802 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms