RNA–Protein interactions for RNA: ENST00000525599.1

CCDC17-208, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-208ENST00000525599 NISCHQ9Y2I1 1504 aa52.84■■■■■ 6.05
CCDC17-208ENST00000525599 CCDC180Q9P1Z9 1646 aa46.84■■■■■ 5.09
CCDC17-208ENST00000525599 ABCC9O60706 1549 aa45.21■■■■■ 4.83
CCDC17-208ENST00000525599 ZCCHC6Q5VYS8 1495 aaKnown RBP44.14■■■■■ 4.66
CCDC17-208ENST00000525599 NACADO15069 1562 aa43.91■■■■■ 4.62
CCDC17-208ENST00000525599 MYO15BQ96JP2 1530 aa43.87■■■■■ 4.61
CCDC17-208ENST00000525599 DCAF1Q9Y4B6 1507 aa43.84■■■■■ 4.61
CCDC17-208ENST00000525599 RB1CC1Q8TDY2 1594 aa43.82■■■■■ 4.61
CCDC17-208ENST00000525599 DCAF8L2P0C7V8 631 aa43.78■■■■■ 4.6
CCDC17-208ENST00000525599 UNC13AQ9UPW8 1703 aa42.77■■■■■ 4.44
CCDC17-208ENST00000525599 SCRIBQ14160 1630 aa42.64■■■■■ 4.42
CCDC17-208ENST00000525599 BICRAQ9NZM4 1560 aa42.42■■■■■ 4.38
CCDC17-208ENST00000525599 PABPN1Q86U42 306 aaKnown RBP eCLIP42.28■■■■■ 4.36
CCDC17-208ENST00000525599 SHROOM4Q9ULL8 1493 aa42.19■■■■■ 4.34
CCDC17-208ENST00000525599 EIF4G1Q04637 1599 aaKnown RBP41.29■■■■■ 4.2
CCDC17-208ENST00000525599 CECR2Q9BXF3 1484 aa41.03■■■■■ 4.16
CCDC17-208ENST00000525599 DNAJC5BQ9UF47 199 aa40.99■■■■■ 4.15
CCDC17-208ENST00000525599 CC2D2AQ9P2K1 1620 aa40.96■■■■■ 4.15
CCDC17-208ENST00000525599 BAZ1AQ9NRL2 1556 aaPredicted RBP40.96■■■■■ 4.15
CCDC17-208ENST00000525599 SMARCA4P51532 1647 aa40.9■■■■■ 4.14
CCDC17-208ENST00000525599 MROH2BQ7Z745 1585 aa40.68■■■■■ 4.1
CCDC17-208ENST00000525599 SMARCA2P51531 1590 aa40.58■■■■■ 4.09
CCDC17-208ENST00000525599 PEG3Q9GZU2 1588 aa40.56■■■■■ 4.08
CCDC17-208ENST00000525599 ATAD2BQ9ULI0 1458 aa40.55■■■■■ 4.08
CCDC17-208ENST00000525599 NCAPD3P42695 1498 aa40.49■■■■■ 4.07
CCDC17-208ENST00000525599 RSF1Q96T23 1441 aaPredicted RBP40.41■■■■■ 4.06
CCDC17-208ENST00000525599 HMGXB3Q12766 1538 aa40.36■■■■■ 4.05
CCDC17-208ENST00000525599 WIZO95785 1651 aa40.25■■■■■ 4.03
CCDC17-208ENST00000525599 BAZ1BQ9UIG0 1483 aaKnown RBP40.24■■■■■ 4.03
CCDC17-208ENST00000525599 TOP2AP11388 1531 aaKnown RBP39.93■■■■□ 3.98
CCDC17-208ENST00000525599 SUPT5HO00267 1087 aaKnown RBP39.64■■■■□ 3.94
CCDC17-208ENST00000525599 CCDC88BA6NC98 1476 aa39.41■■■■□ 3.9
CCDC17-208ENST00000525599 LAMC3Q9Y6N6 1575 aa39.36■■■■□ 3.89
CCDC17-208ENST00000525599 CADPSQ9ULU8 1353 aa39.31■■■■□ 3.88
CCDC17-208ENST00000525599 NESP48681 1621 aa39.25■■■■□ 3.87
CCDC17-208ENST00000525599 CFTRP13569 1480 aa39.19■■■■□ 3.86
CCDC17-208ENST00000525599 PDS5BQ9NTI5 1447 aa39.06■■■■□ 3.84
CCDC17-208ENST00000525599 ERCC6Q03468 1493 aa38.97■■■■□ 3.83
CCDC17-208ENST00000525599 PRDM2Q13029 1718 aa38.97■■■■□ 3.83
CCDC17-208ENST00000525599 KIF21AQ7Z4S6 1674 aa38.85■■■■□ 3.81
CCDC17-208ENST00000525599 FANCD2Q9BXW9 1451 aa38.84■■■■□ 3.81
CCDC17-208ENST00000525599 CEP164Q9UPV0 1460 aa38.77■■■■□ 3.8
CCDC17-208ENST00000525599 THOC2Q8NI27 1593 aaKnown RBP38.63■■■■□ 3.78
CCDC17-208ENST00000525599 MRC2Q9UBG0 1479 aa38.62■■■■□ 3.77
CCDC17-208ENST00000525599 WDR62O43379 1518 aa38.49■■■■□ 3.75
CCDC17-208ENST00000525599 CUX2O14529 1486 aa38.46■■■■□ 3.75
CCDC17-208ENST00000525599 URB2Q14146 1524 aaKnown RBP38.4■■■■□ 3.74
CCDC17-208ENST00000525599 ABCC8Q09428 1581 aa38.39■■■■□ 3.74
CCDC17-208ENST00000525599 DNMBPQ6XZF7 1577 aa38.31■■■■□ 3.72
CCDC17-208ENST00000525599 TOPBP1Q92547 1522 aa38.27■■■■□ 3.72
CCDC17-208ENST00000525599 CUX1P39880 1505 aa38.14■■■■□ 3.7
CCDC17-208ENST00000525599 WRNQ14191 1432 aaPredicted RBP eCLIP38.11■■■■□ 3.69
CCDC17-208ENST00000525599 TOP2BQ02880 1626 aa38■■■■□ 3.67
CCDC17-208ENST00000525599 BIVM-ERCC5R4GMW8 1640 aa37.99■■■■□ 3.67
CCDC17-208ENST00000525599 POLA1P09884 1462 aaPredicted RBP37.98■■■■□ 3.67
CCDC17-208ENST00000525599 SYNJ1O43426 1573 aa37.95■■■■□ 3.67
CCDC17-208ENST00000525599 FGD5Q6ZNL6 1462 aa37.95■■■■□ 3.67
CCDC17-208ENST00000525599 IFT140Q96RY7 1462 aa37.95■■■■□ 3.67
CCDC17-208ENST00000525599 TARBP1Q13395 1621 aaKnown RBP37.83■■■■□ 3.65
CCDC17-208ENST00000525599 SOGA1O94964 1423 aa37.82■■■■□ 3.64
CCDC17-208ENST00000525599 RAD54L2Q9Y4B4 1467 aa37.75■■■■□ 3.63
CCDC17-208ENST00000525599 WDR97A6NE52 1622 aa37.68■■■■□ 3.62
CCDC17-208ENST00000525599 ABCA10Q8WWZ4 1543 aa37.66■■■■□ 3.62
CCDC17-208ENST00000525599 ZNF608Q9ULD9 1512 aaPredicted RBP37.65■■■■□ 3.62
CCDC17-208ENST00000525599 EIF4G3O43432 1585 aaKnown RBP37.58■■■■□ 3.61
CCDC17-208ENST00000525599 TDRD9Q8NDG6 1382 aaKnown RBP37.5■■■■□ 3.59
CCDC17-208ENST00000525599 AQRO60306 1485 aaKnown RBP eCLIP37.5■■■■□ 3.59
CCDC17-208ENST00000525599 TRIM41Q8WV44 630 aa37.49■■■■□ 3.59
CCDC17-208ENST00000525599 ABCA5Q8WWZ7 1642 aa37.45■■■■□ 3.59
CCDC17-208ENST00000525599 GAPVD1Q14C86 1478 aa37.41■■■■□ 3.58
CCDC17-208ENST00000525599 GRIN2BQ13224 1484 aa37.36■■■■□ 3.57
CCDC17-208ENST00000525599 CHIC1Q5VXU3 224 aa37.33■■■■□ 3.57
CCDC17-208ENST00000525599 PBRM1Q86U86 1689 aa37.3■■■■□ 3.56
CCDC17-208ENST00000525599 KIF27Q86VH2 1401 aa37.3■■■■□ 3.56
CCDC17-208ENST00000525599 MAGI1Q96QZ7 1491 aaPredicted RBP37.24■■■■□ 3.55
CCDC17-208ENST00000525599 ERICH3Q5RHP9 1530 aa37.23■■■■□ 3.55
CCDC17-208ENST00000525599 SNAPC4Q5SXM2 1469 aa37.2■■■■□ 3.55
CCDC17-208ENST00000525599 SYNJ2O15056 1496 aa37.07■■■■□ 3.52
CCDC17-208ENST00000525599 ADAMTS12P58397 1594 aa37.06■■■■□ 3.52
CCDC17-208ENST00000525599 IGF1RP08069 1367 aa37.04■■■■□ 3.52
CCDC17-208ENST00000525599 FHAD1B1AJZ9 1412 aa37.03■■■■□ 3.52
CCDC17-208ENST00000525599 CUL7Q14999 1698 aa37■■■■□ 3.51
CCDC17-208ENST00000525599 CHD1O14646 1710 aa36.99■■■■□ 3.51
CCDC17-208ENST00000525599 RUSC2Q8N2Y8 1516 aa36.98■■■■□ 3.51
CCDC17-208ENST00000525599 EEA1Q15075 1411 aa36.97■■■■□ 3.51
CCDC17-208ENST00000525599 CHMP7Q8WUX9 453 aaPredicted RBP36.95■■■■□ 3.51
CCDC17-208ENST00000525599 FBLN2P98095 1184 aa36.91■■■■□ 3.5
CCDC17-208ENST00000525599 OSCARQ8IYS5 282 aa36.89■■■■□ 3.5
CCDC17-208ENST00000525599 GRIN2AQ12879 1464 aa36.87■■■■□ 3.49
CCDC17-208ENST00000525599 CARMIL1Q5VZK9 1371 aa36.84■■■■□ 3.49
CCDC17-208ENST00000525599 CSRNP3Q8WYN3 585 aa36.74■■■■□ 3.47
CCDC17-208ENST00000525599 NUP160Q12769 1436 aa36.71■■■■□ 3.47
CCDC17-208ENST00000525599 PRXQ9BXM0 1461 aa36.7■■■■□ 3.47
CCDC17-208ENST00000525599 RAPGEF2Q9Y4G8 1499 aa36.7■■■■□ 3.47
CCDC17-208ENST00000525599 CLASP1Q7Z460 1538 aa36.64■■■■□ 3.46
CCDC17-208ENST00000525599 DNAJC5Q9H3Z4 198 aa36.64■■■■□ 3.46
CCDC17-208ENST00000525599 CEP170Q5SW79 1584 aa36.64■■■■□ 3.46
CCDC17-208ENST00000525599 FAM9AQ8IZU1 332 aaPredicted RBP36.59■■■■□ 3.45
CCDC17-208ENST00000525599 KIF21BO75037 1637 aa36.51■■■■□ 3.43
CCDC17-208ENST00000525599 KIAA0586Q9BVV6 1533 aa36.48■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms