RNA–Protein interactions for RNA: ENST00000525413.5

CHRDL2-204, Transcript of chordin like 2, humanhuman

TSL 5

Gene CHRDL2, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-204ENST00000525413 NISCHQ9Y2I1 1504 aa32.77■■■□□ 2.84
CHRDL2-204ENST00000525413 CCDC180Q9P1Z9 1646 aa29.01■■■□□ 2.23
CHRDL2-204ENST00000525413 ABCC9O60706 1549 aa28.05■■■□□ 2.08
CHRDL2-204ENST00000525413 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
CHRDL2-204ENST00000525413 DCAF8L2P0C7V8 631 aa27.18■■□□□ 1.94
CHRDL2-204ENST00000525413 DCAF1Q9Y4B6 1507 aa27.17■■□□□ 1.94
CHRDL2-204ENST00000525413 NACADO15069 1562 aa27.17■■□□□ 1.94
CHRDL2-204ENST00000525413 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
CHRDL2-204ENST00000525413 RB1CC1Q8TDY2 1594 aa27.1■■□□□ 1.93
CHRDL2-204ENST00000525413 UNC13AQ9UPW8 1703 aa26.48■■□□□ 1.83
CHRDL2-204ENST00000525413 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
CHRDL2-204ENST00000525413 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
CHRDL2-204ENST00000525413 PABPN1Q86U42 306 aaKnown RBP eCLIP26.16■■□□□ 1.78
CHRDL2-204ENST00000525413 SHROOM4Q9ULL8 1493 aa26.07■■□□□ 1.76
CHRDL2-204ENST00000525413 DNAJC5BQ9UF47 199 aa25.76■■□□□ 1.71
CHRDL2-204ENST00000525413 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
CHRDL2-204ENST00000525413 CECR2Q9BXF3 1484 aa25.43■■□□□ 1.66
CHRDL2-204ENST00000525413 CC2D2AQ9P2K1 1620 aa25.41■■□□□ 1.66
CHRDL2-204ENST00000525413 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.66
CHRDL2-204ENST00000525413 SMARCA4P51532 1647 aa25.34■■□□□ 1.65
CHRDL2-204ENST00000525413 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
CHRDL2-204ENST00000525413 SMARCA2P51531 1590 aa25.13■■□□□ 1.61
CHRDL2-204ENST00000525413 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
CHRDL2-204ENST00000525413 ATAD2BQ9ULI0 1458 aa25.09■■□□□ 1.61
CHRDL2-204ENST00000525413 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
CHRDL2-204ENST00000525413 NCAPD3P42695 1498 aa25.05■■□□□ 1.6
CHRDL2-204ENST00000525413 WIZO95785 1651 aa24.97■■□□□ 1.59
CHRDL2-204ENST00000525413 HMGXB3Q12766 1538 aa24.97■■□□□ 1.59
CHRDL2-204ENST00000525413 BAZ1BQ9UIG0 1483 aaKnown RBP24.93■■□□□ 1.58
CHRDL2-204ENST00000525413 TOP2AP11388 1531 aaKnown RBP24.77■■□□□ 1.56
CHRDL2-204ENST00000525413 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
CHRDL2-204ENST00000525413 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.51
CHRDL2-204ENST00000525413 LAMC3Q9Y6N6 1575 aa24.35■■□□□ 1.49
CHRDL2-204ENST00000525413 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
CHRDL2-204ENST00000525413 NESP48681 1621 aa24.31■■□□□ 1.48
CHRDL2-204ENST00000525413 CFTRP13569 1480 aa24.26■■□□□ 1.47
CHRDL2-204ENST00000525413 PDS5BQ9NTI5 1447 aa24.17■■□□□ 1.46
CHRDL2-204ENST00000525413 PRDM2Q13029 1718 aa24.15■■□□□ 1.46
CHRDL2-204ENST00000525413 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
CHRDL2-204ENST00000525413 KIF21AQ7Z4S6 1674 aa24.05■■□□□ 1.44
CHRDL2-204ENST00000525413 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
CHRDL2-204ENST00000525413 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
CHRDL2-204ENST00000525413 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
CHRDL2-204ENST00000525413 CUX2O14529 1486 aa23.93■■□□□ 1.42
CHRDL2-204ENST00000525413 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
CHRDL2-204ENST00000525413 ABCC8Q09428 1581 aa23.79■■□□□ 1.4
CHRDL2-204ENST00000525413 WDR62O43379 1518 aa23.78■■□□□ 1.4
CHRDL2-204ENST00000525413 URB2Q14146 1524 aaKnown RBP23.75■■□□□ 1.39
CHRDL2-204ENST00000525413 DNMBPQ6XZF7 1577 aa23.73■■□□□ 1.39
CHRDL2-204ENST00000525413 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
CHRDL2-204ENST00000525413 WRNQ14191 1432 aaPredicted RBP eCLIP23.67■■□□□ 1.38
CHRDL2-204ENST00000525413 CUX1P39880 1505 aa23.64■■□□□ 1.38
CHRDL2-204ENST00000525413 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
CHRDL2-204ENST00000525413 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
CHRDL2-204ENST00000525413 SYNJ1O43426 1573 aa23.56■■□□□ 1.36
CHRDL2-204ENST00000525413 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
CHRDL2-204ENST00000525413 FGD5Q6ZNL6 1462 aa23.52■■□□□ 1.36
CHRDL2-204ENST00000525413 IFT140Q96RY7 1462 aa23.48■■□□□ 1.35
CHRDL2-204ENST00000525413 SOGA1O94964 1423 aa23.44■■□□□ 1.34
CHRDL2-204ENST00000525413 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
CHRDL2-204ENST00000525413 RAD54L2Q9Y4B4 1467 aa23.38■■□□□ 1.33
CHRDL2-204ENST00000525413 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
CHRDL2-204ENST00000525413 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.33
CHRDL2-204ENST00000525413 WDR97A6NE52 1622 aa23.33■■□□□ 1.32
CHRDL2-204ENST00000525413 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
CHRDL2-204ENST00000525413 ZNF608Q9ULD9 1512 aaPredicted RBP23.27■■□□□ 1.32
CHRDL2-204ENST00000525413 EIF4G3O43432 1585 aaKnown RBP23.24■■□□□ 1.31
CHRDL2-204ENST00000525413 TDRD9Q8NDG6 1382 aaKnown RBP23.22■■□□□ 1.31
CHRDL2-204ENST00000525413 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.31
CHRDL2-204ENST00000525413 ABCA5Q8WWZ7 1642 aa23.19■■□□□ 1.3
CHRDL2-204ENST00000525413 GAPVD1Q14C86 1478 aa23.18■■□□□ 1.3
CHRDL2-204ENST00000525413 KIF27Q86VH2 1401 aa23.16■■□□□ 1.3
CHRDL2-204ENST00000525413 DNAJC5Q9H3Z4 198 aa23.15■■□□□ 1.3
CHRDL2-204ENST00000525413 GRIN2BQ13224 1484 aa23.14■■□□□ 1.29
CHRDL2-204ENST00000525413 PBRM1Q86U86 1689 aa23.11■■□□□ 1.29
CHRDL2-204ENST00000525413 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.29
CHRDL2-204ENST00000525413 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
CHRDL2-204ENST00000525413 EEA1Q15075 1411 aa23.02■■□□□ 1.28
CHRDL2-204ENST00000525413 SNAPC4Q5SXM2 1469 aa23.02■■□□□ 1.28
CHRDL2-204ENST00000525413 RUSC2Q8N2Y8 1516 aa22.99■■□□□ 1.27
CHRDL2-204ENST00000525413 IGF1RP08069 1367 aa22.98■■□□□ 1.27
CHRDL2-204ENST00000525413 CUL7Q14999 1698 aa22.96■■□□□ 1.27
CHRDL2-204ENST00000525413 ADAMTS12P58397 1594 aa22.94■■□□□ 1.26
CHRDL2-204ENST00000525413 FHAD1B1AJZ9 1412 aa22.94■■□□□ 1.26
CHRDL2-204ENST00000525413 SYNJ2O15056 1496 aa22.93■■□□□ 1.26
CHRDL2-204ENST00000525413 CHD1O14646 1710 aa22.91■■□□□ 1.26
CHRDL2-204ENST00000525413 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
CHRDL2-204ENST00000525413 CSRNP3Q8WYN3 585 aa22.88■■□□□ 1.25
CHRDL2-204ENST00000525413 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
CHRDL2-204ENST00000525413 FBLN2P98095 1184 aa22.86■■□□□ 1.25
CHRDL2-204ENST00000525413 OSCARQ8IYS5 282 aa22.83■■□□□ 1.25
CHRDL2-204ENST00000525413 GRIN2AQ12879 1464 aa22.83■■□□□ 1.25
CHRDL2-204ENST00000525413 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
CHRDL2-204ENST00000525413 PRXQ9BXM0 1461 aa22.79■■□□□ 1.24
CHRDL2-204ENST00000525413 RAPGEF2Q9Y4G8 1499 aa22.79■■□□□ 1.24
CHRDL2-204ENST00000525413 KIF21BO75037 1637 aa22.71■■□□□ 1.23
CHRDL2-204ENST00000525413 NUP160Q12769 1436 aa22.71■■□□□ 1.23
CHRDL2-204ENST00000525413 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
CHRDL2-204ENST00000525413 CLASP1Q7Z460 1538 aa22.67■■□□□ 1.22
CHRDL2-204ENST00000525413 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms