RNA–Protein interactions for RNA: ENST00000525275.5

SHARPIN-203, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 3

Gene SHARPIN, Length 521 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-203ENST00000525275 NISCHQ9Y2I1 1504 aa44.02■■■■■ 4.64
SHARPIN-203ENST00000525275 CCDC180Q9P1Z9 1646 aa39.01■■■■□ 3.84
SHARPIN-203ENST00000525275 ABCC9O60706 1549 aa37.94■■■■□ 3.66
SHARPIN-203ENST00000525275 DCAF8L2P0C7V8 631 aa36.74■■■■□ 3.47
SHARPIN-203ENST00000525275 ZCCHC6Q5VYS8 1495 aaKnown RBP36.7■■■■□ 3.47
SHARPIN-203ENST00000525275 NACADO15069 1562 aa36.63■■■■□ 3.45
SHARPIN-203ENST00000525275 RB1CC1Q8TDY2 1594 aa36.61■■■■□ 3.45
SHARPIN-203ENST00000525275 MYO15BQ96JP2 1530 aa36.5■■■■□ 3.43
SHARPIN-203ENST00000525275 DCAF1Q9Y4B6 1507 aa36.44■■■■□ 3.42
SHARPIN-203ENST00000525275 UNC13AQ9UPW8 1703 aa35.76■■■■□ 3.31
SHARPIN-203ENST00000525275 SCRIBQ14160 1630 aa35.61■■■■□ 3.29
SHARPIN-203ENST00000525275 PABPN1Q86U42 306 aaKnown RBP eCLIP35.52■■■■□ 3.28
SHARPIN-203ENST00000525275 BICRAQ9NZM4 1560 aa35.47■■■■□ 3.27
SHARPIN-203ENST00000525275 SHROOM4Q9ULL8 1493 aa35.14■■■■□ 3.22
SHARPIN-203ENST00000525275 DNAJC5BQ9UF47 199 aa34.6■■■■□ 3.13
SHARPIN-203ENST00000525275 EIF4G1Q04637 1599 aaKnown RBP34.53■■■■□ 3.12
SHARPIN-203ENST00000525275 CC2D2AQ9P2K1 1620 aa34.32■■■■□ 3.08
SHARPIN-203ENST00000525275 CECR2Q9BXF3 1484 aa34.26■■■■□ 3.07
SHARPIN-203ENST00000525275 BAZ1AQ9NRL2 1556 aaPredicted RBP34.11■■■■□ 3.05
SHARPIN-203ENST00000525275 SMARCA4P51532 1647 aa34.08■■■■□ 3.05
SHARPIN-203ENST00000525275 MROH2BQ7Z745 1585 aa33.92■■■■□ 3.02
SHARPIN-203ENST00000525275 ATAD2BQ9ULI0 1458 aa33.85■■■■□ 3.01
SHARPIN-203ENST00000525275 SMARCA2P51531 1590 aa33.83■■■■□ 3.01
SHARPIN-203ENST00000525275 NCAPD3P42695 1498 aa33.81■■■■□ 3
SHARPIN-203ENST00000525275 PEG3Q9GZU2 1588 aa33.76■■■□□ 2.99
SHARPIN-203ENST00000525275 HMGXB3Q12766 1538 aa33.64■■■□□ 2.98
SHARPIN-203ENST00000525275 RSF1Q96T23 1441 aaPredicted RBP33.64■■■□□ 2.98
SHARPIN-203ENST00000525275 BAZ1BQ9UIG0 1483 aaKnown RBP33.59■■■□□ 2.97
SHARPIN-203ENST00000525275 WIZO95785 1651 aa33.57■■■□□ 2.96
SHARPIN-203ENST00000525275 TOP2AP11388 1531 aaKnown RBP33.23■■■□□ 2.91
SHARPIN-203ENST00000525275 SUPT5HO00267 1087 aaKnown RBP33.02■■■□□ 2.88
SHARPIN-203ENST00000525275 NESP48681 1621 aa32.9■■■□□ 2.86
SHARPIN-203ENST00000525275 LAMC3Q9Y6N6 1575 aa32.87■■■□□ 2.85
SHARPIN-203ENST00000525275 CCDC88BA6NC98 1476 aa32.86■■■□□ 2.85
SHARPIN-203ENST00000525275 CADPSQ9ULU8 1353 aa32.84■■■□□ 2.85
SHARPIN-203ENST00000525275 CFTRP13569 1480 aa32.69■■■□□ 2.82
SHARPIN-203ENST00000525275 ERCC6Q03468 1493 aa32.69■■■□□ 2.82
SHARPIN-203ENST00000525275 PDS5BQ9NTI5 1447 aa32.67■■■□□ 2.82
SHARPIN-203ENST00000525275 KIF21AQ7Z4S6 1674 aa32.51■■■□□ 2.79
SHARPIN-203ENST00000525275 FANCD2Q9BXW9 1451 aa32.45■■■□□ 2.79
SHARPIN-203ENST00000525275 PRDM2Q13029 1718 aa32.44■■■□□ 2.78
SHARPIN-203ENST00000525275 CEP164Q9UPV0 1460 aa32.39■■■□□ 2.78
SHARPIN-203ENST00000525275 THOC2Q8NI27 1593 aaKnown RBP32.32■■■□□ 2.77
SHARPIN-203ENST00000525275 MRC2Q9UBG0 1479 aa32.29■■■□□ 2.76
SHARPIN-203ENST00000525275 CUX2O14529 1486 aa32.24■■■□□ 2.75
SHARPIN-203ENST00000525275 WDR62O43379 1518 aa32.15■■■□□ 2.74
SHARPIN-203ENST00000525275 URB2Q14146 1524 aaKnown RBP32.1■■■□□ 2.73
SHARPIN-203ENST00000525275 ABCC8Q09428 1581 aa32.01■■■□□ 2.71
SHARPIN-203ENST00000525275 TOPBP1Q92547 1522 aa31.95■■■□□ 2.71
SHARPIN-203ENST00000525275 DNMBPQ6XZF7 1577 aa31.94■■■□□ 2.7
SHARPIN-203ENST00000525275 CUX1P39880 1505 aa31.8■■■□□ 2.68
SHARPIN-203ENST00000525275 WRNQ14191 1432 aaPredicted RBP eCLIP31.72■■■□□ 2.67
SHARPIN-203ENST00000525275 IFT140Q96RY7 1462 aa31.71■■■□□ 2.67
SHARPIN-203ENST00000525275 POLA1P09884 1462 aaPredicted RBP31.7■■■□□ 2.66
SHARPIN-203ENST00000525275 FGD5Q6ZNL6 1462 aa31.66■■■□□ 2.66
SHARPIN-203ENST00000525275 SOGA1O94964 1423 aa31.61■■■□□ 2.65
SHARPIN-203ENST00000525275 TOP2BQ02880 1626 aa31.6■■■□□ 2.65
SHARPIN-203ENST00000525275 BIVM-ERCC5R4GMW8 1640 aa31.6■■■□□ 2.65
SHARPIN-203ENST00000525275 SYNJ1O43426 1573 aa31.6■■■□□ 2.65
SHARPIN-203ENST00000525275 TARBP1Q13395 1621 aaKnown RBP31.58■■■□□ 2.65
SHARPIN-203ENST00000525275 RAD54L2Q9Y4B4 1467 aa31.57■■■□□ 2.64
SHARPIN-203ENST00000525275 ZNF608Q9ULD9 1512 aaPredicted RBP31.53■■■□□ 2.64
SHARPIN-203ENST00000525275 EIF4G3O43432 1585 aaKnown RBP31.4■■■□□ 2.62
SHARPIN-203ENST00000525275 TDRD9Q8NDG6 1382 aaKnown RBP31.4■■■□□ 2.62
SHARPIN-203ENST00000525275 AQRO60306 1485 aaKnown RBP eCLIP31.4■■■□□ 2.62
SHARPIN-203ENST00000525275 ABCA10Q8WWZ4 1543 aa31.38■■■□□ 2.61
SHARPIN-203ENST00000525275 WDR97A6NE52 1622 aa31.36■■■□□ 2.61
SHARPIN-203ENST00000525275 GAPVD1Q14C86 1478 aa31.23■■■□□ 2.59
SHARPIN-203ENST00000525275 ABCA5Q8WWZ7 1642 aa31.2■■■□□ 2.59
SHARPIN-203ENST00000525275 GRIN2BQ13224 1484 aa31.2■■■□□ 2.58
SHARPIN-203ENST00000525275 TRIM41Q8WV44 630 aa31.19■■■□□ 2.58
SHARPIN-203ENST00000525275 PBRM1Q86U86 1689 aa31.13■■■□□ 2.57
SHARPIN-203ENST00000525275 SNAPC4Q5SXM2 1469 aa31.1■■■□□ 2.57
SHARPIN-203ENST00000525275 DNAJC5Q9H3Z4 198 aa31.09■■■□□ 2.57
SHARPIN-203ENST00000525275 MAGI1Q96QZ7 1491 aaPredicted RBP31.08■■■□□ 2.57
SHARPIN-203ENST00000525275 KIF27Q86VH2 1401 aa31.05■■■□□ 2.56
SHARPIN-203ENST00000525275 OSCARQ8IYS5 282 aa31.02■■■□□ 2.56
SHARPIN-203ENST00000525275 FBLN2P98095 1184 aa31.01■■■□□ 2.55
SHARPIN-203ENST00000525275 ERICH3Q5RHP9 1530 aa31.01■■■□□ 2.55
SHARPIN-203ENST00000525275 CHMP7Q8WUX9 453 aaPredicted RBP30.97■■■□□ 2.55
SHARPIN-203ENST00000525275 CHD1O14646 1710 aa30.96■■■□□ 2.55
SHARPIN-203ENST00000525275 CHIC1Q5VXU3 224 aa30.96■■■□□ 2.55
SHARPIN-203ENST00000525275 SYNJ2O15056 1496 aa30.95■■■□□ 2.55
SHARPIN-203ENST00000525275 IGF1RP08069 1367 aa30.9■■■□□ 2.54
SHARPIN-203ENST00000525275 FHAD1B1AJZ9 1412 aa30.89■■■□□ 2.53
SHARPIN-203ENST00000525275 ADAMTS12P58397 1594 aa30.88■■■□□ 2.53
SHARPIN-203ENST00000525275 RUSC2Q8N2Y8 1516 aa30.82■■■□□ 2.52
SHARPIN-203ENST00000525275 GRIN2AQ12879 1464 aa30.78■■■□□ 2.52
SHARPIN-203ENST00000525275 CUL7Q14999 1698 aa30.78■■■□□ 2.52
SHARPIN-203ENST00000525275 CARMIL1Q5VZK9 1371 aa30.72■■■□□ 2.51
SHARPIN-203ENST00000525275 NUP160Q12769 1436 aa30.64■■■□□ 2.49
SHARPIN-203ENST00000525275 CLASP1Q7Z460 1538 aa30.63■■■□□ 2.49
SHARPIN-203ENST00000525275 EEA1Q15075 1411 aa30.63■■■□□ 2.49
SHARPIN-203ENST00000525275 CEP170Q5SW79 1584 aa30.6■■■□□ 2.49
SHARPIN-203ENST00000525275 CSRNP3Q8WYN3 585 aa30.58■■■□□ 2.49
SHARPIN-203ENST00000525275 RAPGEF2Q9Y4G8 1499 aa30.56■■■□□ 2.48
SHARPIN-203ENST00000525275 FAM9AQ8IZU1 332 aaPredicted RBP30.52■■■□□ 2.48
SHARPIN-203ENST00000525275 PRXQ9BXM0 1461 aa30.5■■■□□ 2.47
SHARPIN-203ENST00000525275 ARHGEF11O15085 1522 aa30.45■■■□□ 2.47
SHARPIN-203ENST00000525275 RIMBP3CA6NJZ7 1639 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms