RNA–Protein interactions for RNA: ENST00000524994.5

CTSF-202, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-202ENST00000524994 NISCHQ9Y2I1 1504 aa18.98■□□□□ 0.63
CTSF-202ENST00000524994 AEBP2Q6ZN18 517 aaPredicted RBP17.71■□□□□ 0.43
CTSF-202ENST00000524994 CHIC1Q5VXU3 224 aa17.09■□□□□ 0.33
CTSF-202ENST00000524994 CCDC180Q9P1Z9 1646 aa16.62■□□□□ 0.25
CTSF-202ENST00000524994 ZCCHC6Q5VYS8 1495 aaKnown RBP15.89■□□□□ 0.13
CTSF-202ENST00000524994 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
CTSF-202ENST00000524994 ABCC9O60706 1549 aa15.73■□□□□ 0.11
CTSF-202ENST00000524994 DCAF8L2P0C7V8 631 aa15.67■□□□□ 0.1
CTSF-202ENST00000524994 MYO15BQ96JP2 1530 aa15.67■□□□□ 0.1
CTSF-202ENST00000524994 NACADO15069 1562 aa15.55■□□□□ 0.08
CTSF-202ENST00000524994 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
CTSF-202ENST00000524994 SHROOM4Q9ULL8 1493 aa15.23■□□□□ 0.03
CTSF-202ENST00000524994 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
CTSF-202ENST00000524994 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
CTSF-202ENST00000524994 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
CTSF-202ENST00000524994 BICRAQ9NZM4 1560 aa14.9□□□□□ -0.02
CTSF-202ENST00000524994 SENP3Q9H4L4 574 aaPredicted RBP14.88□□□□□ -0.03
CTSF-202ENST00000524994 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.04
CTSF-202ENST00000524994 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
CTSF-202ENST00000524994 SUPT5HO00267 1087 aaKnown RBP14.67□□□□□ -0.06
CTSF-202ENST00000524994 BAZ1AQ9NRL2 1556 aaPredicted RBP14.67□□□□□ -0.06
CTSF-202ENST00000524994 RSF1Q96T23 1441 aaPredicted RBP14.66□□□□□ -0.06
CTSF-202ENST00000524994 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
CTSF-202ENST00000524994 SMARCA4P51532 1647 aa14.58□□□□□ -0.08
CTSF-202ENST00000524994 PEG3Q9GZU2 1588 aa14.47□□□□□ -0.09
CTSF-202ENST00000524994 EIF4G1Q04637 1599 aaKnown RBP14.47□□□□□ -0.09
CTSF-202ENST00000524994 WIZO95785 1651 aa14.45□□□□□ -0.1
CTSF-202ENST00000524994 SMARCA2P51531 1590 aa14.43□□□□□ -0.1
CTSF-202ENST00000524994 ATAD2BQ9ULI0 1458 aa14.41□□□□□ -0.1
CTSF-202ENST00000524994 NCAPD3P42695 1498 aa14.37□□□□□ -0.11
CTSF-202ENST00000524994 TOP2AP11388 1531 aaKnown RBP14.35□□□□□ -0.11
CTSF-202ENST00000524994 BAZ1BQ9UIG0 1483 aaKnown RBP14.3□□□□□ -0.12
CTSF-202ENST00000524994 HMGXB3Q12766 1538 aa14.29□□□□□ -0.12
CTSF-202ENST00000524994 CC2D2AQ9P2K1 1620 aa14.27□□□□□ -0.12
CTSF-202ENST00000524994 CCDC88BA6NC98 1476 aa14.21□□□□□ -0.13
CTSF-202ENST00000524994 DNAJC5BQ9UF47 199 aa14.02□□□□□ -0.17
CTSF-202ENST00000524994 CFTRP13569 1480 aa13.98□□□□□ -0.17
CTSF-202ENST00000524994 CADPSQ9ULU8 1353 aa13.96□□□□□ -0.17
CTSF-202ENST00000524994 FOXD1Q16676 465 aa13.93□□□□□ -0.18
CTSF-202ENST00000524994 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
CTSF-202ENST00000524994 LAMC3Q9Y6N6 1575 aa13.87□□□□□ -0.19
CTSF-202ENST00000524994 PRDM2Q13029 1718 aa13.85□□□□□ -0.19
CTSF-202ENST00000524994 WRNQ14191 1432 aaPredicted RBP eCLIP13.81□□□□□ -0.2
CTSF-202ENST00000524994 PLPPR3Q6T4P5 718 aa13.79□□□□□ -0.2
CTSF-202ENST00000524994 PDS5BQ9NTI5 1447 aa13.79□□□□□ -0.2
CTSF-202ENST00000524994 ABCC8Q09428 1581 aa13.77□□□□□ -0.21
CTSF-202ENST00000524994 NESP48681 1621 aa13.75□□□□□ -0.21
CTSF-202ENST00000524994 FANCD2Q9BXW9 1451 aa13.75□□□□□ -0.21
CTSF-202ENST00000524994 TOP2BQ02880 1626 aa13.71□□□□□ -0.22
CTSF-202ENST00000524994 BIVM-ERCC5R4GMW8 1640 aa13.68□□□□□ -0.22
CTSF-202ENST00000524994 CEP164Q9UPV0 1460 aa13.68□□□□□ -0.22
CTSF-202ENST00000524994 SYNJ1O43426 1573 aa13.68□□□□□ -0.22
CTSF-202ENST00000524994 CUX1P39880 1505 aa13.66□□□□□ -0.22
CTSF-202ENST00000524994 EEA1Q15075 1411 aa13.62□□□□□ -0.23
CTSF-202ENST00000524994 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
CTSF-202ENST00000524994 KIF21AQ7Z4S6 1674 aa13.59□□□□□ -0.23
CTSF-202ENST00000524994 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
CTSF-202ENST00000524994 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
CTSF-202ENST00000524994 URB2Q14146 1524 aaKnown RBP13.56□□□□□ -0.24
CTSF-202ENST00000524994 SOGA1O94964 1423 aa13.55□□□□□ -0.24
CTSF-202ENST00000524994 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
CTSF-202ENST00000524994 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
CTSF-202ENST00000524994 FGD5Q6ZNL6 1462 aa13.54□□□□□ -0.24
CTSF-202ENST00000524994 POLA1P09884 1462 aaPredicted RBP13.51□□□□□ -0.25
CTSF-202ENST00000524994 KIF27Q86VH2 1401 aa13.51□□□□□ -0.25
CTSF-202ENST00000524994 FAM9AQ8IZU1 332 aaPredicted RBP13.51□□□□□ -0.25
CTSF-202ENST00000524994 WDR62O43379 1518 aa13.49□□□□□ -0.25
CTSF-202ENST00000524994 RUSC2Q8N2Y8 1516 aa13.47□□□□□ -0.25
CTSF-202ENST00000524994 ABCA10Q8WWZ4 1543 aa13.47□□□□□ -0.25
CTSF-202ENST00000524994 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
CTSF-202ENST00000524994 CUX2O14529 1486 aa13.43□□□□□ -0.26
CTSF-202ENST00000524994 THOC2Q8NI27 1593 aaKnown RBP13.43□□□□□ -0.26
CTSF-202ENST00000524994 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
CTSF-202ENST00000524994 IFT140Q96RY7 1462 aa13.41□□□□□ -0.26
CTSF-202ENST00000524994 PPP6R1Q9UPN7 881 aa13.4□□□□□ -0.26
CTSF-202ENST00000524994 IGF1RP08069 1367 aa13.4□□□□□ -0.26
CTSF-202ENST00000524994 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
CTSF-202ENST00000524994 ADRA2BP18089 450 aa13.38□□□□□ -0.27
CTSF-202ENST00000524994 WDR97A6NE52 1622 aa13.37□□□□□ -0.27
CTSF-202ENST00000524994 PRXQ9BXM0 1461 aa13.36□□□□□ -0.27
CTSF-202ENST00000524994 KIF21BO75037 1637 aa13.36□□□□□ -0.27
CTSF-202ENST00000524994 GOLGA3Q08378 1498 aa13.35□□□□□ -0.27
CTSF-202ENST00000524994 GAPVD1Q14C86 1478 aa13.34□□□□□ -0.27
CTSF-202ENST00000524994 TDRD9Q8NDG6 1382 aaKnown RBP13.33□□□□□ -0.27
CTSF-202ENST00000524994 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.28
CTSF-202ENST00000524994 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
CTSF-202ENST00000524994 TNIKQ9UKE5 1360 aa13.32□□□□□ -0.28
CTSF-202ENST00000524994 ABCA5Q8WWZ7 1642 aa13.32□□□□□ -0.28
CTSF-202ENST00000524994 UBTFP17480 764 aaKnown RBP13.31□□□□□ -0.28
CTSF-202ENST00000524994 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
CTSF-202ENST00000524994 CUL7Q14999 1698 aa13.28□□□□□ -0.28
CTSF-202ENST00000524994 AQRO60306 1485 aaKnown RBP eCLIP13.27□□□□□ -0.29
CTSF-202ENST00000524994 GRIN2BQ13224 1484 aa13.27□□□□□ -0.29
CTSF-202ENST00000524994 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
CTSF-202ENST00000524994 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
CTSF-202ENST00000524994 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
CTSF-202ENST00000524994 PBRM1Q86U86 1689 aa13.21□□□□□ -0.3
CTSF-202ENST00000524994 EIF4G3O43432 1585 aaKnown RBP13.19□□□□□ -0.3
CTSF-202ENST00000524994 MAGI1Q96QZ7 1491 aaPredicted RBP13.18□□□□□ -0.3
CTSF-202ENST00000524994 CEP162Q5TB80 1403 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms