RNA–Protein interactions for RNA: ENST00000524820.6

SYT9-202, Transcript of synaptotagmin 9, humanhuman

TSL 2

Gene SYT9, Length 2,094 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT9-202ENST00000524820 NISCHQ9Y2I1 1504 aa21.94■■□□□ 1.1
SYT9-202ENST00000524820 CCDC180Q9P1Z9 1646 aa19.26■□□□□ 0.67
SYT9-202ENST00000524820 ABCC9O60706 1549 aa18.65■□□□□ 0.58
SYT9-202ENST00000524820 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
SYT9-202ENST00000524820 DCAF8L2P0C7V8 631 aa18.27■□□□□ 0.51
SYT9-202ENST00000524820 DCAF1Q9Y4B6 1507 aa18.16■□□□□ 0.5
SYT9-202ENST00000524820 NACADO15069 1562 aa18.02■□□□□ 0.48
SYT9-202ENST00000524820 RB1CC1Q8TDY2 1594 aa17.98■□□□□ 0.47
SYT9-202ENST00000524820 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
SYT9-202ENST00000524820 SHROOM4Q9ULL8 1493 aa17.93■□□□□ 0.46
SYT9-202ENST00000524820 SCRIBQ14160 1630 aa17.73■□□□□ 0.43
SYT9-202ENST00000524820 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
SYT9-202ENST00000524820 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.39
SYT9-202ENST00000524820 BICRAQ9NZM4 1560 aa17.49■□□□□ 0.39
SYT9-202ENST00000524820 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
SYT9-202ENST00000524820 CECR2Q9BXF3 1484 aa17.11■□□□□ 0.33
SYT9-202ENST00000524820 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
SYT9-202ENST00000524820 EIF4G1Q04637 1599 aaKnown RBP16.99■□□□□ 0.31
SYT9-202ENST00000524820 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
SYT9-202ENST00000524820 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
SYT9-202ENST00000524820 SMARCA4P51532 1647 aa16.93■□□□□ 0.3
SYT9-202ENST00000524820 WIZO95785 1651 aa16.85■□□□□ 0.29
SYT9-202ENST00000524820 CC2D2AQ9P2K1 1620 aa16.85■□□□□ 0.29
SYT9-202ENST00000524820 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
SYT9-202ENST00000524820 ATAD2BQ9ULI0 1458 aa16.75■□□□□ 0.27
SYT9-202ENST00000524820 PEG3Q9GZU2 1588 aa16.7■□□□□ 0.26
SYT9-202ENST00000524820 SMARCA2P51531 1590 aa16.69■□□□□ 0.26
SYT9-202ENST00000524820 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
SYT9-202ENST00000524820 NCAPD3P42695 1498 aa16.65■□□□□ 0.26
SYT9-202ENST00000524820 CHIC1Q5VXU3 224 aa16.64■□□□□ 0.25
SYT9-202ENST00000524820 BAZ1BQ9UIG0 1483 aaKnown RBP16.63■□□□□ 0.25
SYT9-202ENST00000524820 HMGXB3Q12766 1538 aa16.59■□□□□ 0.25
SYT9-202ENST00000524820 CCDC88BA6NC98 1476 aa16.47■□□□□ 0.23
SYT9-202ENST00000524820 NESP48681 1621 aa16.27■□□□□ 0.19
SYT9-202ENST00000524820 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
SYT9-202ENST00000524820 CADPSQ9ULU8 1353 aa16.2■□□□□ 0.18
SYT9-202ENST00000524820 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
SYT9-202ENST00000524820 CFTRP13569 1480 aa16.18■□□□□ 0.18
SYT9-202ENST00000524820 LAMC3Q9Y6N6 1575 aa16.15■□□□□ 0.18
SYT9-202ENST00000524820 PRDM2Q13029 1718 aa16.07■□□□□ 0.16
SYT9-202ENST00000524820 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
SYT9-202ENST00000524820 KIF21AQ7Z4S6 1674 aa16.04■□□□□ 0.16
SYT9-202ENST00000524820 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
SYT9-202ENST00000524820 PDS5BQ9NTI5 1447 aa16.03■□□□□ 0.16
SYT9-202ENST00000524820 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
SYT9-202ENST00000524820 LOC105371045A0A1W2PR82 267 aa15.99■□□□□ 0.15
SYT9-202ENST00000524820 ERCC6Q03468 1493 aa15.99■□□□□ 0.15
SYT9-202ENST00000524820 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
SYT9-202ENST00000524820 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
SYT9-202ENST00000524820 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
SYT9-202ENST00000524820 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
SYT9-202ENST00000524820 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.13
SYT9-202ENST00000524820 EEA1Q15075 1411 aa15.89■□□□□ 0.13
SYT9-202ENST00000524820 SOGA1O94964 1423 aa15.88■□□□□ 0.13
SYT9-202ENST00000524820 HRCP23327 699 aa15.88■□□□□ 0.13
SYT9-202ENST00000524820 THOC2Q8NI27 1593 aaKnown RBP15.88■□□□□ 0.13
SYT9-202ENST00000524820 MRC2Q9UBG0 1479 aa15.87■□□□□ 0.13
SYT9-202ENST00000524820 CUX1P39880 1505 aa15.86■□□□□ 0.13
SYT9-202ENST00000524820 TOPBP1Q92547 1522 aa15.83■□□□□ 0.12
SYT9-202ENST00000524820 DNMBPQ6XZF7 1577 aa15.81■□□□□ 0.12
SYT9-202ENST00000524820 RUSC2Q8N2Y8 1516 aa15.81■□□□□ 0.12
SYT9-202ENST00000524820 WDR62O43379 1518 aa15.8■□□□□ 0.12
SYT9-202ENST00000524820 FGD5Q6ZNL6 1462 aa15.75■□□□□ 0.11
SYT9-202ENST00000524820 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
SYT9-202ENST00000524820 POLA1P09884 1462 aaPredicted RBP15.73■□□□□ 0.11
SYT9-202ENST00000524820 KIF21BO75037 1637 aa15.72■□□□□ 0.11
SYT9-202ENST00000524820 EHMT2Q96KQ7 1210 aa15.71■□□□□ 0.1
SYT9-202ENST00000524820 RAD54L2Q9Y4B4 1467 aa15.7■□□□□ 0.1
SYT9-202ENST00000524820 CUX2O14529 1486 aa15.7■□□□□ 0.1
SYT9-202ENST00000524820 GOLGA3Q08378 1498 aa15.67■□□□□ 0.1
SYT9-202ENST00000524820 TNIKQ9UKE5 1360 aa15.63■□□□□ 0.09
SYT9-202ENST00000524820 TARBP1Q13395 1621 aaKnown RBP15.63■□□□□ 0.09
SYT9-202ENST00000524820 KIF27Q86VH2 1401 aa15.62■□□□□ 0.09
SYT9-202ENST00000524820 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
SYT9-202ENST00000524820 ZNF608Q9ULD9 1512 aaPredicted RBP15.59■□□□□ 0.09
SYT9-202ENST00000524820 ERICH3Q5RHP9 1530 aa15.59■□□□□ 0.09
SYT9-202ENST00000524820 WDR97A6NE52 1622 aa15.58■□□□□ 0.08
SYT9-202ENST00000524820 CEP162Q5TB80 1403 aa15.58■□□□□ 0.08
SYT9-202ENST00000524820 TDRD9Q8NDG6 1382 aaKnown RBP15.57■□□□□ 0.08
SYT9-202ENST00000524820 PRXQ9BXM0 1461 aa15.57■□□□□ 0.08
SYT9-202ENST00000524820 RAPGEF2Q9Y4G8 1499 aa15.57■□□□□ 0.08
SYT9-202ENST00000524820 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
SYT9-202ENST00000524820 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.08
SYT9-202ENST00000524820 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
SYT9-202ENST00000524820 EIF4G3O43432 1585 aaKnown RBP15.51■□□□□ 0.07
SYT9-202ENST00000524820 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
SYT9-202ENST00000524820 GAPVD1Q14C86 1478 aa15.48■□□□□ 0.07
SYT9-202ENST00000524820 PELP1Q8IZL8 1130 aaKnown RBP15.45■□□□□ 0.06
SYT9-202ENST00000524820 IGF1RP08069 1367 aa15.45■□□□□ 0.06
SYT9-202ENST00000524820 PBRM1Q86U86 1689 aa15.43■□□□□ 0.06
SYT9-202ENST00000524820 CLIP1P30622 1438 aa15.42■□□□□ 0.06
SYT9-202ENST00000524820 PCGF6Q9BYE7 350 aa15.41■□□□□ 0.06
SYT9-202ENST00000524820 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
SYT9-202ENST00000524820 CUL7Q14999 1698 aa15.4■□□□□ 0.06
SYT9-202ENST00000524820 TRIM26Q12899 539 aaPredicted RBP15.39■□□□□ 0.05
SYT9-202ENST00000524820 SNAPC4Q5SXM2 1469 aa15.39■□□□□ 0.05
SYT9-202ENST00000524820 CARMIL1Q5VZK9 1371 aa15.37■□□□□ 0.05
SYT9-202ENST00000524820 ADAMTS12P58397 1594 aa15.33■□□□□ 0.04
SYT9-202ENST00000524820 PPARGC1BQ86YN6 1023 aaKnown RBP15.32■□□□□ 0.04
SYT9-202ENST00000524820 VPS8Q8N3P4 1428 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms