RNA–Protein interactions for RNA: ENST00000524680.1

TMEM136-203, Transcript of transmembrane protein 136, humanhuman

TSL 5

Gene TMEM136, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM136-203ENST00000524680 NISCHQ9Y2I1 1504 aa27.91■■■□□ 2.06
TMEM136-203ENST00000524680 CCDC180Q9P1Z9 1646 aa24.51■■□□□ 1.51
TMEM136-203ENST00000524680 ABCC9O60706 1549 aa23.83■■□□□ 1.41
TMEM136-203ENST00000524680 ZCCHC6Q5VYS8 1495 aaKnown RBP23.29■■□□□ 1.32
TMEM136-203ENST00000524680 DCAF8L2P0C7V8 631 aa23.25■■□□□ 1.31
TMEM136-203ENST00000524680 DCAF1Q9Y4B6 1507 aa23.09■■□□□ 1.29
TMEM136-203ENST00000524680 MYO15BQ96JP2 1530 aa23.08■■□□□ 1.29
TMEM136-203ENST00000524680 NACADO15069 1562 aa23.07■■□□□ 1.28
TMEM136-203ENST00000524680 RB1CC1Q8TDY2 1594 aa22.98■■□□□ 1.27
TMEM136-203ENST00000524680 SCRIBQ14160 1630 aa22.44■■□□□ 1.18
TMEM136-203ENST00000524680 PABPN1Q86U42 306 aaKnown RBP eCLIP22.42■■□□□ 1.18
TMEM136-203ENST00000524680 UNC13AQ9UPW8 1703 aa22.35■■□□□ 1.17
TMEM136-203ENST00000524680 BICRAQ9NZM4 1560 aa22.34■■□□□ 1.17
TMEM136-203ENST00000524680 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
TMEM136-203ENST00000524680 DNAJC5BQ9UF47 199 aa21.76■■□□□ 1.07
TMEM136-203ENST00000524680 CECR2Q9BXF3 1484 aa21.76■■□□□ 1.07
TMEM136-203ENST00000524680 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
TMEM136-203ENST00000524680 BAZ1AQ9NRL2 1556 aaPredicted RBP21.55■■□□□ 1.04
TMEM136-203ENST00000524680 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
TMEM136-203ENST00000524680 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
TMEM136-203ENST00000524680 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
TMEM136-203ENST00000524680 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
TMEM136-203ENST00000524680 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
TMEM136-203ENST00000524680 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
TMEM136-203ENST00000524680 PEG3Q9GZU2 1588 aa21.33■■□□□ 1.01
TMEM136-203ENST00000524680 SMARCA2P51531 1590 aa21.31■■□□□ 1
TMEM136-203ENST00000524680 WIZO95785 1651 aa21.22■□□□□ 0.99
TMEM136-203ENST00000524680 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
TMEM136-203ENST00000524680 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
TMEM136-203ENST00000524680 SUPT5HO00267 1087 aaKnown RBP21.14■□□□□ 0.97
TMEM136-203ENST00000524680 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
TMEM136-203ENST00000524680 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
TMEM136-203ENST00000524680 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
TMEM136-203ENST00000524680 NESP48681 1621 aa20.73■□□□□ 0.91
TMEM136-203ENST00000524680 CFTRP13569 1480 aa20.69■□□□□ 0.9
TMEM136-203ENST00000524680 LAMC3Q9Y6N6 1575 aa20.64■□□□□ 0.9
TMEM136-203ENST00000524680 PDS5BQ9NTI5 1447 aa20.57■□□□□ 0.88
TMEM136-203ENST00000524680 FANCD2Q9BXW9 1451 aa20.48■□□□□ 0.87
TMEM136-203ENST00000524680 ERCC6Q03468 1493 aa20.46■□□□□ 0.87
TMEM136-203ENST00000524680 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
TMEM136-203ENST00000524680 KIF21AQ7Z4S6 1674 aa20.33■□□□□ 0.85
TMEM136-203ENST00000524680 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
TMEM136-203ENST00000524680 PRDM2Q13029 1718 aa20.28■□□□□ 0.84
TMEM136-203ENST00000524680 URB2Q14146 1524 aaKnown RBP20.27■□□□□ 0.83
TMEM136-203ENST00000524680 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
TMEM136-203ENST00000524680 WDR62O43379 1518 aa20.22■□□□□ 0.83
TMEM136-203ENST00000524680 ABCC8Q09428 1581 aa20.19■□□□□ 0.82
TMEM136-203ENST00000524680 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
TMEM136-203ENST00000524680 WRNQ14191 1432 aaPredicted RBP eCLIP20.16■□□□□ 0.82
TMEM136-203ENST00000524680 CUX2O14529 1486 aa20.16■□□□□ 0.82
TMEM136-203ENST00000524680 CUX1P39880 1505 aa20.16■□□□□ 0.82
TMEM136-203ENST00000524680 DNMBPQ6XZF7 1577 aa20.13■□□□□ 0.81
TMEM136-203ENST00000524680 POLA1P09884 1462 aaPredicted RBP20.04■□□□□ 0.8
TMEM136-203ENST00000524680 SYNJ1O43426 1573 aa20.04■□□□□ 0.8
TMEM136-203ENST00000524680 FGD5Q6ZNL6 1462 aa20.02■□□□□ 0.8
TMEM136-203ENST00000524680 TOP2BQ02880 1626 aa20.02■□□□□ 0.79
TMEM136-203ENST00000524680 SOGA1O94964 1423 aa20.01■□□□□ 0.79
TMEM136-203ENST00000524680 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
TMEM136-203ENST00000524680 RAD54L2Q9Y4B4 1467 aa19.99■□□□□ 0.79
TMEM136-203ENST00000524680 CHIC1Q5VXU3 224 aa19.98■□□□□ 0.79
TMEM136-203ENST00000524680 BIVM-ERCC5R4GMW8 1640 aa19.97■□□□□ 0.79
TMEM136-203ENST00000524680 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
TMEM136-203ENST00000524680 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
TMEM136-203ENST00000524680 ZNF608Q9ULD9 1512 aaPredicted RBP19.9■□□□□ 0.78
TMEM136-203ENST00000524680 TDRD9Q8NDG6 1382 aaKnown RBP19.88■□□□□ 0.77
TMEM136-203ENST00000524680 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
TMEM136-203ENST00000524680 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.77
TMEM136-203ENST00000524680 GAPVD1Q14C86 1478 aa19.74■□□□□ 0.75
TMEM136-203ENST00000524680 WDR97A6NE52 1622 aa19.72■□□□□ 0.75
TMEM136-203ENST00000524680 KIF27Q86VH2 1401 aa19.71■□□□□ 0.75
TMEM136-203ENST00000524680 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
TMEM136-203ENST00000524680 GRIN2BQ13224 1484 aa19.69■□□□□ 0.74
TMEM136-203ENST00000524680 IGF1RP08069 1367 aa19.69■□□□□ 0.74
TMEM136-203ENST00000524680 ABCA5Q8WWZ7 1642 aa19.68■□□□□ 0.74
TMEM136-203ENST00000524680 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
TMEM136-203ENST00000524680 SNAPC4Q5SXM2 1469 aa19.6■□□□□ 0.73
TMEM136-203ENST00000524680 ERICH3Q5RHP9 1530 aa19.6■□□□□ 0.73
TMEM136-203ENST00000524680 MAGI1Q96QZ7 1491 aaPredicted RBP19.58■□□□□ 0.72
TMEM136-203ENST00000524680 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
TMEM136-203ENST00000524680 CHMP7Q8WUX9 453 aaPredicted RBP19.55■□□□□ 0.72
TMEM136-203ENST00000524680 FHAD1B1AJZ9 1412 aa19.54■□□□□ 0.72
TMEM136-203ENST00000524680 FBLN2P98095 1184 aa19.53■□□□□ 0.72
TMEM136-203ENST00000524680 FAM9AQ8IZU1 332 aaPredicted RBP19.53■□□□□ 0.72
TMEM136-203ENST00000524680 CARMIL1Q5VZK9 1371 aa19.53■□□□□ 0.72
TMEM136-203ENST00000524680 EEA1Q15075 1411 aa19.52■□□□□ 0.72
TMEM136-203ENST00000524680 SYNJ2O15056 1496 aa19.52■□□□□ 0.72
TMEM136-203ENST00000524680 PBRM1Q86U86 1689 aa19.5■□□□□ 0.71
TMEM136-203ENST00000524680 OSCARQ8IYS5 282 aa19.49■□□□□ 0.71
TMEM136-203ENST00000524680 ADAMTS12P58397 1594 aa19.46■□□□□ 0.71
TMEM136-203ENST00000524680 PRXQ9BXM0 1461 aa19.45■□□□□ 0.7
TMEM136-203ENST00000524680 GRIN2AQ12879 1464 aa19.42■□□□□ 0.7
TMEM136-203ENST00000524680 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
TMEM136-203ENST00000524680 CUL7Q14999 1698 aa19.39■□□□□ 0.69
TMEM136-203ENST00000524680 NUP160Q12769 1436 aa19.37■□□□□ 0.69
TMEM136-203ENST00000524680 CHD1O14646 1710 aa19.34■□□□□ 0.69
TMEM136-203ENST00000524680 DNAJC5Q9H3Z4 198 aa19.31■□□□□ 0.68
TMEM136-203ENST00000524680 CEP170Q5SW79 1584 aa19.28■□□□□ 0.68
TMEM136-203ENST00000524680 KIAA0586Q9BVV6 1533 aa19.26■□□□□ 0.67
TMEM136-203ENST00000524680 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
TMEM136-203ENST00000524680 JPH4Q96JJ6 628 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms