RNA–Protein interactions for RNA: ENST00000524197.1

RIMS1-220, Transcript of regulating synaptic membrane exocytosis 1, humanhuman

TSL 1 (best)

Gene RIMS1, Length 2,276 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS1-220ENST00000524197 AEBP2Q6ZN18 517 aaPredicted RBP15.65■□□□□ 0.1
RIMS1-220ENST00000524197 CHIC1Q5VXU3 224 aa14.65□□□□□ -0.06
RIMS1-220ENST00000524197 NISCHQ9Y2I1 1504 aa14.53□□□□□ -0.08
RIMS1-220ENST00000524197 SENP3Q9H4L4 574 aaPredicted RBP13.48□□□□□ -0.25
RIMS1-220ENST00000524197 PHF23Q9BUL5 403 aaPredicted RBP13.18□□□□□ -0.3
RIMS1-220ENST00000524197 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
RIMS1-220ENST00000524197 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
RIMS1-220ENST00000524197 FOXD1Q16676 465 aa12.59□□□□□ -0.39
RIMS1-220ENST00000524197 ZCCHC6Q5VYS8 1495 aaKnown RBP12.25□□□□□ -0.45
RIMS1-220ENST00000524197 DCAF1Q9Y4B6 1507 aa12.07□□□□□ -0.48
RIMS1-220ENST00000524197 MSH5O43196 834 aa12.04□□□□□ -0.48
RIMS1-220ENST00000524197 MYO15BQ96JP2 1530 aa11.9□□□□□ -0.5
RIMS1-220ENST00000524197 ABCC9O60706 1549 aa11.79□□□□□ -0.52
RIMS1-220ENST00000524197 NACADO15069 1562 aa11.79□□□□□ -0.52
RIMS1-220ENST00000524197 SHROOM4Q9ULL8 1493 aa11.77□□□□□ -0.52
RIMS1-220ENST00000524197 DCAF8L2P0C7V8 631 aa11.75□□□□□ -0.53
RIMS1-220ENST00000524197 RB1CC1Q8TDY2 1594 aa11.68□□□□□ -0.54
RIMS1-220ENST00000524197 SCRIBQ14160 1630 aa11.65□□□□□ -0.54
RIMS1-220ENST00000524197 PIAS4Q8N2W9 510 aaPredicted RBP11.62□□□□□ -0.55
RIMS1-220ENST00000524197 UNC13AQ9UPW8 1703 aa11.58□□□□□ -0.56
RIMS1-220ENST00000524197 SUPT5HO00267 1087 aaKnown RBP11.33□□□□□ -0.6
RIMS1-220ENST00000524197 PPP6R1Q9UPN7 881 aa11.32□□□□□ -0.6
RIMS1-220ENST00000524197 BICRAQ9NZM4 1560 aa11.3□□□□□ -0.6
RIMS1-220ENST00000524197 BAZ1AQ9NRL2 1556 aaPredicted RBP11.25□□□□□ -0.61
RIMS1-220ENST00000524197 ADRA2BP18089 450 aa11.24□□□□□ -0.61
RIMS1-220ENST00000524197 RSF1Q96T23 1441 aaPredicted RBP11.24□□□□□ -0.61
RIMS1-220ENST00000524197 PLPPR3Q6T4P5 718 aa11.23□□□□□ -0.61
RIMS1-220ENST00000524197 CECR2Q9BXF3 1484 aa11.22□□□□□ -0.61
RIMS1-220ENST00000524197 SMARCA4P51532 1647 aa11.21□□□□□ -0.61
RIMS1-220ENST00000524197 MROH2BQ7Z745 1585 aa11.2□□□□□ -0.62
RIMS1-220ENST00000524197 WIZO95785 1651 aa11.18□□□□□ -0.62
RIMS1-220ENST00000524197 PEG3Q9GZU2 1588 aa11.08□□□□□ -0.64
RIMS1-220ENST00000524197 TOP2AP11388 1531 aaKnown RBP11.07□□□□□ -0.64
RIMS1-220ENST00000524197 PABPN1Q86U42 306 aaKnown RBP eCLIP11.03□□□□□ -0.64
RIMS1-220ENST00000524197 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
RIMS1-220ENST00000524197 EIF4G1Q04637 1599 aaKnown RBP10.97□□□□□ -0.65
RIMS1-220ENST00000524197 ATAD2BQ9ULI0 1458 aa10.91□□□□□ -0.66
RIMS1-220ENST00000524197 HMGXB3Q12766 1538 aa10.89□□□□□ -0.67
RIMS1-220ENST00000524197 BAZ1BQ9UIG0 1483 aaKnown RBP10.89□□□□□ -0.67
RIMS1-220ENST00000524197 CCDC88BA6NC98 1476 aa10.87□□□□□ -0.67
RIMS1-220ENST00000524197 PRDM2Q13029 1718 aa10.82□□□□□ -0.68
RIMS1-220ENST00000524197 NCAPD3P42695 1498 aa10.8□□□□□ -0.68
RIMS1-220ENST00000524197 CC2D2AQ9P2K1 1620 aa10.77□□□□□ -0.69
RIMS1-220ENST00000524197 ABCC8Q09428 1581 aa10.71□□□□□ -0.7
RIMS1-220ENST00000524197 TRIM41Q8WV44 630 aa10.68□□□□□ -0.7
RIMS1-220ENST00000524197 BIVM-ERCC5R4GMW8 1640 aa10.64□□□□□ -0.71
RIMS1-220ENST00000524197 SYNJ1O43426 1573 aa10.62□□□□□ -0.71
RIMS1-220ENST00000524197 CACNB1Q02641 598 aaPredicted RBP10.6□□□□□ -0.71
RIMS1-220ENST00000524197 DMRT2Q9Y5R5 561 aa10.6□□□□□ -0.71
RIMS1-220ENST00000524197 WRNQ14191 1432 aaPredicted RBP eCLIP10.6□□□□□ -0.71
RIMS1-220ENST00000524197 CFTRP13569 1480 aa10.6□□□□□ -0.71
RIMS1-220ENST00000524197 TOP2BQ02880 1626 aa10.6□□□□□ -0.71
RIMS1-220ENST00000524197 EEA1Q15075 1411 aa10.54□□□□□ -0.72
RIMS1-220ENST00000524197 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.73
RIMS1-220ENST00000524197 CADPSQ9ULU8 1353 aa10.5□□□□□ -0.73
RIMS1-220ENST00000524197 CUX1P39880 1505 aa10.49□□□□□ -0.73
RIMS1-220ENST00000524197 MAPK8IP2Q13387 824 aaPredicted RBP10.48□□□□□ -0.73
RIMS1-220ENST00000524197 KIF21BO75037 1637 aa10.47□□□□□ -0.73
RIMS1-220ENST00000524197 LOC105371045A0A1W2PR82 267 aa10.45□□□□□ -0.74
RIMS1-220ENST00000524197 SOGA1O94964 1423 aa10.45□□□□□ -0.74
RIMS1-220ENST00000524197 FAM9AQ8IZU1 332 aaPredicted RBP10.44□□□□□ -0.74
RIMS1-220ENST00000524197 KIF21AQ7Z4S6 1674 aa10.43□□□□□ -0.74
RIMS1-220ENST00000524197 FANCD2Q9BXW9 1451 aa10.43□□□□□ -0.74
RIMS1-220ENST00000524197 DNMBPQ6XZF7 1577 aa10.42□□□□□ -0.74
RIMS1-220ENST00000524197 RUSC2Q8N2Y8 1516 aa10.41□□□□□ -0.74
RIMS1-220ENST00000524197 GOLGA3Q08378 1498 aa10.39□□□□□ -0.75
RIMS1-220ENST00000524197 NESP48681 1621 aa10.39□□□□□ -0.75
RIMS1-220ENST00000524197 CEP164Q9UPV0 1460 aa10.38□□□□□ -0.75
RIMS1-220ENST00000524197 WDR97A6NE52 1622 aa10.38□□□□□ -0.75
RIMS1-220ENST00000524197 ERICH3Q5RHP9 1530 aa10.36□□□□□ -0.75
RIMS1-220ENST00000524197 FGD5Q6ZNL6 1462 aa10.35□□□□□ -0.75
RIMS1-220ENST00000524197 SCAF1Q9H7N4 1312 aaKnown RBP10.35□□□□□ -0.75
RIMS1-220ENST00000524197 CSRNP3Q8WYN3 585 aa10.35□□□□□ -0.75
RIMS1-220ENST00000524197 TOPBP1Q92547 1522 aa10.34□□□□□ -0.75
RIMS1-220ENST00000524197 PDS5BQ9NTI5 1447 aa10.33□□□□□ -0.76
RIMS1-220ENST00000524197 KIF27Q86VH2 1401 aa10.32□□□□□ -0.76
RIMS1-220ENST00000524197 TNIKQ9UKE5 1360 aa10.32□□□□□ -0.76
RIMS1-220ENST00000524197 URB2Q14146 1524 aaKnown RBP10.29□□□□□ -0.76
RIMS1-220ENST00000524197 CEP162Q5TB80 1403 aa10.29□□□□□ -0.76
RIMS1-220ENST00000524197 POLA1P09884 1462 aaPredicted RBP10.28□□□□□ -0.76
RIMS1-220ENST00000524197 PRXQ9BXM0 1461 aa10.28□□□□□ -0.76
RIMS1-220ENST00000524197 CUL7Q14999 1698 aa10.28□□□□□ -0.76
RIMS1-220ENST00000524197 ABCA10Q8WWZ4 1543 aa10.28□□□□□ -0.76
RIMS1-220ENST00000524197 CUX2O14529 1486 aa10.27□□□□□ -0.77
RIMS1-220ENST00000524197 RAPGEF2Q9Y4G8 1499 aa10.27□□□□□ -0.77
RIMS1-220ENST00000524197 ABCA5Q8WWZ7 1642 aa10.26□□□□□ -0.77
RIMS1-220ENST00000524197 EHMT2Q96KQ7 1210 aa10.25□□□□□ -0.77
RIMS1-220ENST00000524197 DNAJC5BQ9UF47 199 aa10.24□□□□□ -0.77
RIMS1-220ENST00000524197 PBRM1Q86U86 1689 aa10.24□□□□□ -0.77
RIMS1-220ENST00000524197 CTTNBP2Q8WZ74 1663 aa10.24□□□□□ -0.77
RIMS1-220ENST00000524197 TARBP1Q13395 1621 aaKnown RBP10.24□□□□□ -0.77
RIMS1-220ENST00000524197 MRC2Q9UBG0 1479 aa10.23□□□□□ -0.77
RIMS1-220ENST00000524197 WDR62O43379 1518 aa10.22□□□□□ -0.77
RIMS1-220ENST00000524197 RNF39Q9H2S5 420 aa10.21□□□□□ -0.77
RIMS1-220ENST00000524197 UBTFP17480 764 aaKnown RBP10.21□□□□□ -0.78
RIMS1-220ENST00000524197 THOC2Q8NI27 1593 aaKnown RBP10.2□□□□□ -0.78
RIMS1-220ENST00000524197 RAD54L2Q9Y4B4 1467 aa10.2□□□□□ -0.78
RIMS1-220ENST00000524197 CLIP1P30622 1438 aa10.18□□□□□ -0.78
RIMS1-220ENST00000524197 IGF1RP08069 1367 aa10.16□□□□□ -0.78
RIMS1-220ENST00000524197 GAPVD1Q14C86 1478 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms