RNA–Protein interactions for RNA: ENST00000524095.5

CLVS1-211, Transcript of clavesin 1, humanhuman

TSL 3

Gene CLVS1, Length 709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-211ENST00000524095 AEBP2Q6ZN18 517 aaPredicted RBP19.35■□□□□ 0.69
CLVS1-211ENST00000524095 NISCHQ9Y2I1 1504 aa18.83■□□□□ 0.6
CLVS1-211ENST00000524095 CHIC1Q5VXU3 224 aa18.06■□□□□ 0.48
CLVS1-211ENST00000524095 ABCC9O60706 1549 aa17.47■□□□□ 0.39
CLVS1-211ENST00000524095 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
CLVS1-211ENST00000524095 CCDC180Q9P1Z9 1646 aa16.82■□□□□ 0.28
CLVS1-211ENST00000524095 SENP3Q9H4L4 574 aaPredicted RBP16.57■□□□□ 0.24
CLVS1-211ENST00000524095 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
CLVS1-211ENST00000524095 RB1CC1Q8TDY2 1594 aa16.32■□□□□ 0.2
CLVS1-211ENST00000524095 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
CLVS1-211ENST00000524095 DCAF8L2P0C7V8 631 aa16.27■□□□□ 0.2
CLVS1-211ENST00000524095 NACADO15069 1562 aa16.15■□□□□ 0.18
CLVS1-211ENST00000524095 BICRAQ9NZM4 1560 aa15.93■□□□□ 0.14
CLVS1-211ENST00000524095 MYO15BQ96JP2 1530 aa15.82■□□□□ 0.12
CLVS1-211ENST00000524095 DNAJC5Q9H3Z4 198 aa15.81■□□□□ 0.12
CLVS1-211ENST00000524095 UNC13AQ9UPW8 1703 aa15.81■□□□□ 0.12
CLVS1-211ENST00000524095 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
CLVS1-211ENST00000524095 CC2D2AQ9P2K1 1620 aa15.68■□□□□ 0.1
CLVS1-211ENST00000524095 SHROOM4Q9ULL8 1493 aa15.58■□□□□ 0.08
CLVS1-211ENST00000524095 EIF4G1Q04637 1599 aaKnown RBP15.54■□□□□ 0.08
CLVS1-211ENST00000524095 FOXD1Q16676 465 aa15.53■□□□□ 0.08
CLVS1-211ENST00000524095 DCAF1Q9Y4B6 1507 aa15.47■□□□□ 0.07
CLVS1-211ENST00000524095 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.07
CLVS1-211ENST00000524095 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
CLVS1-211ENST00000524095 POTEDQ86YR6 584 aa15.33■□□□□ 0.04
CLVS1-211ENST00000524095 CUX2O14529 1486 aa15.14■□□□□ 0.01
CLVS1-211ENST00000524095 ERCC6Q03468 1493 aa15.06■□□□□ 0
CLVS1-211ENST00000524095 NCAPD3P42695 1498 aa15.04■□□□□ -0
CLVS1-211ENST00000524095 ATAD2BQ9ULI0 1458 aa14.93□□□□□ -0.02
CLVS1-211ENST00000524095 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
CLVS1-211ENST00000524095 NESP48681 1621 aa14.92□□□□□ -0.02
CLVS1-211ENST00000524095 SMARCA2P51531 1590 aa14.74□□□□□ -0.05
CLVS1-211ENST00000524095 HMGXB3Q12766 1538 aa14.73□□□□□ -0.05
CLVS1-211ENST00000524095 MSH5O43196 834 aa14.73□□□□□ -0.05
CLVS1-211ENST00000524095 BAZ1BQ9UIG0 1483 aaKnown RBP14.68□□□□□ -0.06
CLVS1-211ENST00000524095 SMARCA4P51532 1647 aa14.67□□□□□ -0.06
CLVS1-211ENST00000524095 THOC2Q8NI27 1593 aaKnown RBP14.67□□□□□ -0.06
CLVS1-211ENST00000524095 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
CLVS1-211ENST00000524095 LAMC3Q9Y6N6 1575 aa14.6□□□□□ -0.07
CLVS1-211ENST00000524095 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
CLVS1-211ENST00000524095 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
CLVS1-211ENST00000524095 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
CLVS1-211ENST00000524095 PEG3Q9GZU2 1588 aa14.54□□□□□ -0.08
CLVS1-211ENST00000524095 MROH2BQ7Z745 1585 aa14.53□□□□□ -0.08
CLVS1-211ENST00000524095 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
CLVS1-211ENST00000524095 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
CLVS1-211ENST00000524095 WDR62O43379 1518 aa14.44□□□□□ -0.1
CLVS1-211ENST00000524095 PIAS4Q8N2W9 510 aaPredicted RBP14.37□□□□□ -0.11
CLVS1-211ENST00000524095 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
CLVS1-211ENST00000524095 CEP164Q9UPV0 1460 aa14.35□□□□□ -0.11
CLVS1-211ENST00000524095 CYB5RLQ6IPT4 315 aa14.3□□□□□ -0.12
CLVS1-211ENST00000524095 CFTRP13569 1480 aa14.3□□□□□ -0.12
CLVS1-211ENST00000524095 URB2Q14146 1524 aaKnown RBP14.26□□□□□ -0.13
CLVS1-211ENST00000524095 WIZO95785 1651 aa14.24□□□□□ -0.13
CLVS1-211ENST00000524095 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
CLVS1-211ENST00000524095 RIMBP3CA6NJZ7 1639 aa14.2□□□□□ -0.14
CLVS1-211ENST00000524095 RIMBP3BA6NNM3 1639 aa14.2□□□□□ -0.14
CLVS1-211ENST00000524095 RIMBP3Q9UFD9 1639 aa14.2□□□□□ -0.14
CLVS1-211ENST00000524095 ZNF608Q9ULD9 1512 aaPredicted RBP14.19□□□□□ -0.14
CLVS1-211ENST00000524095 ARHGEF11O15085 1522 aa14.17□□□□□ -0.14
CLVS1-211ENST00000524095 RSF1Q96T23 1441 aaPredicted RBP14.15□□□□□ -0.14
CLVS1-211ENST00000524095 PPP6R1Q9UPN7 881 aa14.12□□□□□ -0.15
CLVS1-211ENST00000524095 IFT140Q96RY7 1462 aa14.12□□□□□ -0.15
CLVS1-211ENST00000524095 FBLN2P98095 1184 aa14.08□□□□□ -0.16
CLVS1-211ENST00000524095 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.16
CLVS1-211ENST00000524095 ADRA2BP18089 450 aa14.05□□□□□ -0.16
CLVS1-211ENST00000524095 ARAP1Q96P48 1450 aa14.04□□□□□ -0.16
CLVS1-211ENST00000524095 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
CLVS1-211ENST00000524095 TOPBP1Q92547 1522 aa14.02□□□□□ -0.16
CLVS1-211ENST00000524095 CCDC88BA6NC98 1476 aa14.01□□□□□ -0.17
CLVS1-211ENST00000524095 PLPPR3Q6T4P5 718 aa13.99□□□□□ -0.17
CLVS1-211ENST00000524095 ABCC8Q09428 1581 aa13.94□□□□□ -0.18
CLVS1-211ENST00000524095 TDRD9Q8NDG6 1382 aaKnown RBP13.94□□□□□ -0.18
CLVS1-211ENST00000524095 CHMP7Q8WUX9 453 aaPredicted RBP13.91□□□□□ -0.18
CLVS1-211ENST00000524095 EIF4G3O43432 1585 aaKnown RBP13.9□□□□□ -0.18
CLVS1-211ENST00000524095 RAD54L2Q9Y4B4 1467 aa13.89□□□□□ -0.19
CLVS1-211ENST00000524095 SOGA1O94964 1423 aa13.88□□□□□ -0.19
CLVS1-211ENST00000524095 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
CLVS1-211ENST00000524095 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
CLVS1-211ENST00000524095 DNMBPQ6XZF7 1577 aa13.85□□□□□ -0.19
CLVS1-211ENST00000524095 CHD1O14646 1710 aa13.81□□□□□ -0.2
CLVS1-211ENST00000524095 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
CLVS1-211ENST00000524095 CLASP1Q7Z460 1538 aa13.78□□□□□ -0.2
CLVS1-211ENST00000524095 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
CLVS1-211ENST00000524095 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
CLVS1-211ENST00000524095 GRIN2BQ13224 1484 aa13.72□□□□□ -0.21
CLVS1-211ENST00000524095 MAGI1Q96QZ7 1491 aaPredicted RBP13.71□□□□□ -0.21
CLVS1-211ENST00000524095 SYNJ2O15056 1496 aa13.7□□□□□ -0.22
CLVS1-211ENST00000524095 FGD5Q6ZNL6 1462 aa13.7□□□□□ -0.22
CLVS1-211ENST00000524095 SYNJ1O43426 1573 aa13.69□□□□□ -0.22
CLVS1-211ENST00000524095 CUX1P39880 1505 aa13.64□□□□□ -0.23
CLVS1-211ENST00000524095 ERCC6L2Q5T890 1561 aa13.61□□□□□ -0.23
CLVS1-211ENST00000524095 WDR97A6NE52 1622 aa13.6□□□□□ -0.23
CLVS1-211ENST00000524095 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
CLVS1-211ENST00000524095 FAM69CQ0P6D2 419 aa13.56□□□□□ -0.24
CLVS1-211ENST00000524095 ILDR1Q86SU0 546 aaPredicted RBP13.55□□□□□ -0.24
CLVS1-211ENST00000524095 JPH4Q96JJ6 628 aa13.55□□□□□ -0.24
CLVS1-211ENST00000524095 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
CLVS1-211ENST00000524095 NUP160Q12769 1436 aa13.53□□□□□ -0.24
CLVS1-211ENST00000524095 GRIN2AQ12879 1464 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms