RNA–Protein interactions for RNA: ENST00000523695.5

CHRNA2-210, Transcript of cholinergic receptor nicotinic alpha 2 subunit, humanhuman

TSL 1 (best)

Gene CHRNA2, Length 2,515 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA2-210ENST00000523695 NISCHQ9Y2I1 1504 aa32.06■■■□□ 2.72
CHRNA2-210ENST00000523695 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
CHRNA2-210ENST00000523695 ZCCHC6Q5VYS8 1495 aaKnown RBP26.92■■□□□ 1.9
CHRNA2-210ENST00000523695 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
CHRNA2-210ENST00000523695 SHROOM4Q9ULL8 1493 aa26.61■■□□□ 1.85
CHRNA2-210ENST00000523695 ABCC9O60706 1549 aa26.55■■□□□ 1.84
CHRNA2-210ENST00000523695 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
CHRNA2-210ENST00000523695 MYO15BQ96JP2 1530 aa25.9■■□□□ 1.74
CHRNA2-210ENST00000523695 NACADO15069 1562 aa25.84■■□□□ 1.73
CHRNA2-210ENST00000523695 SCRIBQ14160 1630 aa25.82■■□□□ 1.72
CHRNA2-210ENST00000523695 RB1CC1Q8TDY2 1594 aa25.64■■□□□ 1.7
CHRNA2-210ENST00000523695 SUPT5HO00267 1087 aaKnown RBP25.6■■□□□ 1.69
CHRNA2-210ENST00000523695 UNC13AQ9UPW8 1703 aa25.24■■□□□ 1.63
CHRNA2-210ENST00000523695 PABPN1Q86U42 306 aaKnown RBP eCLIP25.19■■□□□ 1.62
CHRNA2-210ENST00000523695 CECR2Q9BXF3 1484 aa25.1■■□□□ 1.61
CHRNA2-210ENST00000523695 BICRAQ9NZM4 1560 aa25.01■■□□□ 1.59
CHRNA2-210ENST00000523695 RSF1Q96T23 1441 aaPredicted RBP24.99■■□□□ 1.59
CHRNA2-210ENST00000523695 MROH2BQ7Z745 1585 aa24.89■■□□□ 1.58
CHRNA2-210ENST00000523695 WIZO95785 1651 aa24.69■■□□□ 1.54
CHRNA2-210ENST00000523695 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
CHRNA2-210ENST00000523695 SMARCA4P51532 1647 aa24.61■■□□□ 1.53
CHRNA2-210ENST00000523695 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
CHRNA2-210ENST00000523695 TOP2AP11388 1531 aaKnown RBP24.27■■□□□ 1.48
CHRNA2-210ENST00000523695 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
CHRNA2-210ENST00000523695 EIF4G1Q04637 1599 aaKnown RBP24.23■■□□□ 1.47
CHRNA2-210ENST00000523695 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
CHRNA2-210ENST00000523695 CCDC88BA6NC98 1476 aa24.16■■□□□ 1.46
CHRNA2-210ENST00000523695 SMARCA2P51531 1590 aa24.12■■□□□ 1.45
CHRNA2-210ENST00000523695 BAZ1BQ9UIG0 1483 aaKnown RBP24.09■■□□□ 1.45
CHRNA2-210ENST00000523695 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
CHRNA2-210ENST00000523695 TRIM41Q8WV44 630 aa23.9■■□□□ 1.42
CHRNA2-210ENST00000523695 CC2D2AQ9P2K1 1620 aa23.89■■□□□ 1.42
CHRNA2-210ENST00000523695 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
CHRNA2-210ENST00000523695 ABCC8Q09428 1581 aa23.79■■□□□ 1.4
CHRNA2-210ENST00000523695 FAM9AQ8IZU1 332 aaPredicted RBP23.7■■□□□ 1.38
CHRNA2-210ENST00000523695 DNAJC5BQ9UF47 199 aa23.67■■□□□ 1.38
CHRNA2-210ENST00000523695 LOC105371045A0A1W2PR82 267 aa23.67■■□□□ 1.38
CHRNA2-210ENST00000523695 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
CHRNA2-210ENST00000523695 WRNQ14191 1432 aaPredicted RBP eCLIP23.48■■□□□ 1.35
CHRNA2-210ENST00000523695 CFTRP13569 1480 aa23.47■■□□□ 1.35
CHRNA2-210ENST00000523695 SYNJ1O43426 1573 aa23.43■■□□□ 1.34
CHRNA2-210ENST00000523695 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
CHRNA2-210ENST00000523695 SOGA1O94964 1423 aa23.37■■□□□ 1.33
CHRNA2-210ENST00000523695 NESP48681 1621 aa23.37■■□□□ 1.33
CHRNA2-210ENST00000523695 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.32
CHRNA2-210ENST00000523695 HRCP23327 699 aa23.24■■□□□ 1.31
CHRNA2-210ENST00000523695 CUX1P39880 1505 aa23.23■■□□□ 1.31
CHRNA2-210ENST00000523695 TOP2BQ02880 1626 aa23.2■■□□□ 1.3
CHRNA2-210ENST00000523695 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
CHRNA2-210ENST00000523695 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
CHRNA2-210ENST00000523695 PCGF6Q9BYE7 350 aa23.13■■□□□ 1.29
CHRNA2-210ENST00000523695 BIVM-ERCC5R4GMW8 1640 aa23.12■■□□□ 1.29
CHRNA2-210ENST00000523695 CSRNP3Q8WYN3 585 aa23.11■■□□□ 1.29
CHRNA2-210ENST00000523695 LAMC3Q9Y6N6 1575 aa23.05■■□□□ 1.28
CHRNA2-210ENST00000523695 EEA1Q15075 1411 aa22.99■■□□□ 1.27
CHRNA2-210ENST00000523695 CEP164Q9UPV0 1460 aa22.97■■□□□ 1.27
CHRNA2-210ENST00000523695 FGD5Q6ZNL6 1462 aa22.96■■□□□ 1.27
CHRNA2-210ENST00000523695 PDS5BQ9NTI5 1447 aa22.93■■□□□ 1.26
CHRNA2-210ENST00000523695 KIF21AQ7Z4S6 1674 aa22.92■■□□□ 1.26
CHRNA2-210ENST00000523695 UBTFP17480 764 aaKnown RBP22.91■■□□□ 1.26
CHRNA2-210ENST00000523695 URB2Q14146 1524 aaKnown RBP22.91■■□□□ 1.26
CHRNA2-210ENST00000523695 TOPBP1Q92547 1522 aa22.91■■□□□ 1.26
CHRNA2-210ENST00000523695 RAD54L2Q9Y4B4 1467 aa22.88■■□□□ 1.25
CHRNA2-210ENST00000523695 DNMBPQ6XZF7 1577 aa22.87■■□□□ 1.25
CHRNA2-210ENST00000523695 CUX2O14529 1486 aa22.85■■□□□ 1.25
CHRNA2-210ENST00000523695 POLA1P09884 1462 aaPredicted RBP22.84■■□□□ 1.25
CHRNA2-210ENST00000523695 RAPGEF2Q9Y4G8 1499 aa22.84■■□□□ 1.25
CHRNA2-210ENST00000523695 KIF27Q86VH2 1401 aa22.83■■□□□ 1.25
CHRNA2-210ENST00000523695 GOLGA3Q08378 1498 aa22.81■■□□□ 1.24
CHRNA2-210ENST00000523695 RANGAP1P46060 587 aaPredicted RBP22.77■■□□□ 1.24
CHRNA2-210ENST00000523695 TNIKQ9UKE5 1360 aa22.77■■□□□ 1.23
CHRNA2-210ENST00000523695 KIF21BO75037 1637 aa22.75■■□□□ 1.23
CHRNA2-210ENST00000523695 CEP162Q5TB80 1403 aa22.75■■□□□ 1.23
CHRNA2-210ENST00000523695 IGF1RP08069 1367 aa22.72■■□□□ 1.23
CHRNA2-210ENST00000523695 TRIM26Q12899 539 aaPredicted RBP22.72■■□□□ 1.23
CHRNA2-210ENST00000523695 PRXQ9BXM0 1461 aa22.71■■□□□ 1.23
CHRNA2-210ENST00000523695 PPARGC1BQ86YN6 1023 aaKnown RBP22.68■■□□□ 1.22
CHRNA2-210ENST00000523695 TDRD9Q8NDG6 1382 aaKnown RBP22.68■■□□□ 1.22
CHRNA2-210ENST00000523695 ABCA10Q8WWZ4 1543 aa22.66■■□□□ 1.22
CHRNA2-210ENST00000523695 MRC2Q9UBG0 1479 aa22.65■■□□□ 1.22
CHRNA2-210ENST00000523695 ERCC6Q03468 1493 aa22.65■■□□□ 1.22
CHRNA2-210ENST00000523695 CARMIL1Q5VZK9 1371 aa22.58■■□□□ 1.21
CHRNA2-210ENST00000523695 ERICH3Q5RHP9 1530 aa22.57■■□□□ 1.2
CHRNA2-210ENST00000523695 WDR97A6NE52 1622 aa22.54■■□□□ 1.2
CHRNA2-210ENST00000523695 CLIP1P30622 1438 aa22.54■■□□□ 1.2
CHRNA2-210ENST00000523695 TARBP1Q13395 1621 aaKnown RBP22.53■■□□□ 1.2
CHRNA2-210ENST00000523695 TTBK1Q5TCY1 1321 aaPredicted RBP22.51■■□□□ 1.19
CHRNA2-210ENST00000523695 WDR62O43379 1518 aa22.5■■□□□ 1.19
CHRNA2-210ENST00000523695 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.19
CHRNA2-210ENST00000523695 GAPVD1Q14C86 1478 aa22.49■■□□□ 1.19
CHRNA2-210ENST00000523695 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
CHRNA2-210ENST00000523695 ZNF608Q9ULD9 1512 aaPredicted RBP22.46■■□□□ 1.19
CHRNA2-210ENST00000523695 THOC2Q8NI27 1593 aaKnown RBP22.46■■□□□ 1.19
CHRNA2-210ENST00000523695 IFT140Q96RY7 1462 aa22.36■■□□□ 1.17
CHRNA2-210ENST00000523695 ARAP1Q96P48 1450 aa22.33■■□□□ 1.16
CHRNA2-210ENST00000523695 CUL7Q14999 1698 aa22.32■■□□□ 1.16
CHRNA2-210ENST00000523695 ZEB1P37275 1124 aaPredicted RBP22.31■■□□□ 1.16
CHRNA2-210ENST00000523695 P3H3Q8IVL6 736 aa22.3■■□□□ 1.16
CHRNA2-210ENST00000523695 ARHGAP35Q9NRY4 1499 aa22.3■■□□□ 1.16
CHRNA2-210ENST00000523695 VPS8Q8N3P4 1428 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms