RNA–Protein interactions for RNA: ENST00000523637.2

MSRA-209, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 2

Gene MSRA, Length 1,092 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-209ENST00000523637 AEBP2Q6ZN18 517 aaPredicted RBP21.72■■□□□ 1.07
MSRA-209ENST00000523637 CHIC1Q5VXU3 224 aa20.22■□□□□ 0.83
MSRA-209ENST00000523637 NISCHQ9Y2I1 1504 aa19.08■□□□□ 0.64
MSRA-209ENST00000523637 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
MSRA-209ENST00000523637 ABCC9O60706 1549 aa18.45■□□□□ 0.54
MSRA-209ENST00000523637 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
MSRA-209ENST00000523637 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
MSRA-209ENST00000523637 POTEDQ86YR6 584 aa17.73■□□□□ 0.43
MSRA-209ENST00000523637 FOXD1Q16676 465 aa17.48■□□□□ 0.39
MSRA-209ENST00000523637 CCDC180Q9P1Z9 1646 aa17.43■□□□□ 0.38
MSRA-209ENST00000523637 DNAJC5Q9H3Z4 198 aa17.31■□□□□ 0.36
MSRA-209ENST00000523637 RB1CC1Q8TDY2 1594 aa17.11■□□□□ 0.33
MSRA-209ENST00000523637 PABPN1Q86U42 306 aaKnown RBP eCLIP17.08■□□□□ 0.32
MSRA-209ENST00000523637 NACADO15069 1562 aa16.76■□□□□ 0.27
MSRA-209ENST00000523637 CECR2Q9BXF3 1484 aa16.72■□□□□ 0.27
MSRA-209ENST00000523637 MSH5O43196 834 aa16.65■□□□□ 0.26
MSRA-209ENST00000523637 DCAF8L2P0C7V8 631 aa16.63■□□□□ 0.25
MSRA-209ENST00000523637 BICRAQ9NZM4 1560 aa16.61■□□□□ 0.25
MSRA-209ENST00000523637 UNC13AQ9UPW8 1703 aa16.58■□□□□ 0.24
MSRA-209ENST00000523637 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
MSRA-209ENST00000523637 EIF4G1Q04637 1599 aaKnown RBP16.32■□□□□ 0.2
MSRA-209ENST00000523637 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
MSRA-209ENST00000523637 CUX2O14529 1486 aa16.25■□□□□ 0.19
MSRA-209ENST00000523637 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
MSRA-209ENST00000523637 MYO15BQ96JP2 1530 aa16.22■□□□□ 0.19
MSRA-209ENST00000523637 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
MSRA-209ENST00000523637 ERCC6Q03468 1493 aa16.02■□□□□ 0.15
MSRA-209ENST00000523637 SCRIBQ14160 1630 aa15.93■□□□□ 0.14
MSRA-209ENST00000523637 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
MSRA-209ENST00000523637 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
MSRA-209ENST00000523637 ZCCHC6Q5VYS8 1495 aaKnown RBP15.62■□□□□ 0.09
MSRA-209ENST00000523637 ADRA2BP18089 450 aa15.58■□□□□ 0.08
MSRA-209ENST00000523637 NESP48681 1621 aa15.57■□□□□ 0.08
MSRA-209ENST00000523637 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
MSRA-209ENST00000523637 NCAPD3P42695 1498 aa15.52■□□□□ 0.07
MSRA-209ENST00000523637 SMARCA2P51531 1590 aa15.43■□□□□ 0.06
MSRA-209ENST00000523637 OSCARQ8IYS5 282 aa15.4■□□□□ 0.06
MSRA-209ENST00000523637 PLPPR3Q6T4P5 718 aa15.39■□□□□ 0.05
MSRA-209ENST00000523637 ATAD2BQ9ULI0 1458 aa15.35■□□□□ 0.05
MSRA-209ENST00000523637 BAZ1AQ9NRL2 1556 aaPredicted RBP15.33■□□□□ 0.05
MSRA-209ENST00000523637 HMGXB3Q12766 1538 aa15.28■□□□□ 0.04
MSRA-209ENST00000523637 PDS5BQ9NTI5 1447 aa15.28■□□□□ 0.04
MSRA-209ENST00000523637 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
MSRA-209ENST00000523637 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
MSRA-209ENST00000523637 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
MSRA-209ENST00000523637 RIMBP3CA6NJZ7 1639 aa15.22■□□□□ 0.03
MSRA-209ENST00000523637 RIMBP3BA6NNM3 1639 aa15.22■□□□□ 0.03
MSRA-209ENST00000523637 RIMBP3Q9UFD9 1639 aa15.22■□□□□ 0.03
MSRA-209ENST00000523637 MRC2Q9UBG0 1479 aa15.19■□□□□ 0.02
MSRA-209ENST00000523637 BAZ1BQ9UIG0 1483 aaKnown RBP15.16■□□□□ 0.02
MSRA-209ENST00000523637 WDR62O43379 1518 aa15.15■□□□□ 0.02
MSRA-209ENST00000523637 ARHGEF11O15085 1522 aa15.12■□□□□ 0.01
MSRA-209ENST00000523637 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
MSRA-209ENST00000523637 SMARCA4P51532 1647 aa15.05■□□□□ -0
MSRA-209ENST00000523637 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
MSRA-209ENST00000523637 ILDR1Q86SU0 546 aaPredicted RBP14.98□□□□□ -0.01
MSRA-209ENST00000523637 CEP164Q9UPV0 1460 aa14.95□□□□□ -0.02
MSRA-209ENST00000523637 ARAP1Q96P48 1450 aa14.91□□□□□ -0.02
MSRA-209ENST00000523637 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
MSRA-209ENST00000523637 FANCD2Q9BXW9 1451 aa14.85□□□□□ -0.03
MSRA-209ENST00000523637 CACNB1Q02641 598 aaPredicted RBP14.79□□□□□ -0.04
MSRA-209ENST00000523637 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.04
MSRA-209ENST00000523637 ZNF608Q9ULD9 1512 aaPredicted RBP14.76□□□□□ -0.05
MSRA-209ENST00000523637 RSF1Q96T23 1441 aaPredicted RBP14.75□□□□□ -0.05
MSRA-209ENST00000523637 MROH2BQ7Z745 1585 aa14.7□□□□□ -0.06
MSRA-209ENST00000523637 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
MSRA-209ENST00000523637 FBLN2P98095 1184 aa14.67□□□□□ -0.06
MSRA-209ENST00000523637 DMRT2Q9Y5R5 561 aa14.65□□□□□ -0.06
MSRA-209ENST00000523637 CFTRP13569 1480 aa14.63□□□□□ -0.07
MSRA-209ENST00000523637 CHD1O14646 1710 aa14.59□□□□□ -0.07
MSRA-209ENST00000523637 MAPK8IP2Q13387 824 aaPredicted RBP14.58□□□□□ -0.08
MSRA-209ENST00000523637 EIF4G3O43432 1585 aaKnown RBP14.58□□□□□ -0.08
MSRA-209ENST00000523637 AQRO60306 1485 aaKnown RBP eCLIP14.52□□□□□ -0.08
MSRA-209ENST00000523637 KDM4FA0A1W2PPD8 638 aa14.48□□□□□ -0.09
MSRA-209ENST00000523637 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.09
MSRA-209ENST00000523637 TOPBP1Q92547 1522 aa14.46□□□□□ -0.1
MSRA-209ENST00000523637 WIZO95785 1651 aa14.44□□□□□ -0.1
MSRA-209ENST00000523637 GAPVD1Q14C86 1478 aa14.44□□□□□ -0.1
MSRA-209ENST00000523637 CHMP7Q8WUX9 453 aaPredicted RBP14.39□□□□□ -0.11
MSRA-209ENST00000523637 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
MSRA-209ENST00000523637 ABCC8Q09428 1581 aa14.35□□□□□ -0.11
MSRA-209ENST00000523637 TARBP1Q13395 1621 aaKnown RBP14.34□□□□□ -0.11
MSRA-209ENST00000523637 SNAPC4Q5SXM2 1469 aa14.34□□□□□ -0.11
MSRA-209ENST00000523637 TDRD9Q8NDG6 1382 aaKnown RBP14.31□□□□□ -0.12
MSRA-209ENST00000523637 DNMBPQ6XZF7 1577 aa14.3□□□□□ -0.12
MSRA-209ENST00000523637 FBXO41Q8TF61 875 aa14.29□□□□□ -0.12
MSRA-209ENST00000523637 PRDM2Q13029 1718 aa14.26□□□□□ -0.13
MSRA-209ENST00000523637 ERCC6L2Q5T890 1561 aa14.26□□□□□ -0.13
MSRA-209ENST00000523637 POLA1P09884 1462 aaPredicted RBP14.25□□□□□ -0.13
MSRA-209ENST00000523637 MAGI1Q96QZ7 1491 aaPredicted RBP14.24□□□□□ -0.13
MSRA-209ENST00000523637 RAD54L2Q9Y4B4 1467 aa14.24□□□□□ -0.13
MSRA-209ENST00000523637 TOP2AP11388 1531 aaKnown RBP14.23□□□□□ -0.13
MSRA-209ENST00000523637 SCAF1Q9H7N4 1312 aaKnown RBP14.22□□□□□ -0.13
MSRA-209ENST00000523637 FAM69CQ0P6D2 419 aa14.22□□□□□ -0.13
MSRA-209ENST00000523637 SYNJ2O15056 1496 aa14.22□□□□□ -0.13
MSRA-209ENST00000523637 KIF13AQ9H1H9 1805 aa14.22□□□□□ -0.13
MSRA-209ENST00000523637 HECW2Q9P2P5 1572 aa14.21□□□□□ -0.14
MSRA-209ENST00000523637 LMTK3Q96Q04 1460 aa14.19□□□□□ -0.14
MSRA-209ENST00000523637 SOGA1O94964 1423 aa14.19□□□□□ -0.14
MSRA-209ENST00000523637 KDM6BO15054 1643 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms