RNA–Protein interactions for RNA: ENST00000523290.5

RUNX1T1-245, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 2

Gene RUNX1T1, Length 2,061 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-245ENST00000523290 NISCHQ9Y2I1 1504 aa16■□□□□ 0.15
RUNX1T1-245ENST00000523290 AEBP2Q6ZN18 517 aaPredicted RBP14.42□□□□□ -0.1
RUNX1T1-245ENST00000523290 CCDC180Q9P1Z9 1646 aa13.97□□□□□ -0.17
RUNX1T1-245ENST00000523290 CHIC1Q5VXU3 224 aa13.87□□□□□ -0.19
RUNX1T1-245ENST00000523290 ZCCHC6Q5VYS8 1495 aaKnown RBP13.42□□□□□ -0.26
RUNX1T1-245ENST00000523290 DCAF1Q9Y4B6 1507 aa13.26□□□□□ -0.29
RUNX1T1-245ENST00000523290 ABCC9O60706 1549 aa13.24□□□□□ -0.29
RUNX1T1-245ENST00000523290 DCAF8L2P0C7V8 631 aa13.2□□□□□ -0.3
RUNX1T1-245ENST00000523290 MYO15BQ96JP2 1530 aa13.15□□□□□ -0.3
RUNX1T1-245ENST00000523290 NACADO15069 1562 aa13.06□□□□□ -0.32
RUNX1T1-245ENST00000523290 SHROOM4Q9ULL8 1493 aa12.94□□□□□ -0.34
RUNX1T1-245ENST00000523290 RB1CC1Q8TDY2 1594 aa12.94□□□□□ -0.34
RUNX1T1-245ENST00000523290 SCRIBQ14160 1630 aa12.79□□□□□ -0.36
RUNX1T1-245ENST00000523290 UNC13AQ9UPW8 1703 aa12.57□□□□□ -0.4
RUNX1T1-245ENST00000523290 BICRAQ9NZM4 1560 aa12.51□□□□□ -0.41
RUNX1T1-245ENST00000523290 PABPN1Q86U42 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
RUNX1T1-245ENST00000523290 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.42
RUNX1T1-245ENST00000523290 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.42
RUNX1T1-245ENST00000523290 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
RUNX1T1-245ENST00000523290 PHF23Q9BUL5 403 aaPredicted RBP12.37□□□□□ -0.43
RUNX1T1-245ENST00000523290 BAZ1AQ9NRL2 1556 aaPredicted RBP12.36□□□□□ -0.43
RUNX1T1-245ENST00000523290 MROH2BQ7Z745 1585 aa12.33□□□□□ -0.44
RUNX1T1-245ENST00000523290 SMARCA4P51532 1647 aa12.28□□□□□ -0.44
RUNX1T1-245ENST00000523290 WIZO95785 1651 aa12.19□□□□□ -0.46
RUNX1T1-245ENST00000523290 PEG3Q9GZU2 1588 aa12.17□□□□□ -0.46
RUNX1T1-245ENST00000523290 EIF4G1Q04637 1599 aaKnown RBP12.15□□□□□ -0.46
RUNX1T1-245ENST00000523290 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
RUNX1T1-245ENST00000523290 ATAD2BQ9ULI0 1458 aa12.13□□□□□ -0.47
RUNX1T1-245ENST00000523290 TOP2AP11388 1531 aaKnown RBP12.12□□□□□ -0.47
RUNX1T1-245ENST00000523290 NCAPD3P42695 1498 aa12.06□□□□□ -0.48
RUNX1T1-245ENST00000523290 BAZ1BQ9UIG0 1483 aaKnown RBP12.05□□□□□ -0.48
RUNX1T1-245ENST00000523290 HMGXB3Q12766 1538 aa12.01□□□□□ -0.49
RUNX1T1-245ENST00000523290 CCDC88BA6NC98 1476 aa11.99□□□□□ -0.49
RUNX1T1-245ENST00000523290 CC2D2AQ9P2K1 1620 aa11.98□□□□□ -0.49
RUNX1T1-245ENST00000523290 SENP3Q9H4L4 574 aaPredicted RBP11.97□□□□□ -0.49
RUNX1T1-245ENST00000523290 CFTRP13569 1480 aa11.76□□□□□ -0.53
RUNX1T1-245ENST00000523290 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
RUNX1T1-245ENST00000523290 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
RUNX1T1-245ENST00000523290 DNAJC5BQ9UF47 199 aa11.72□□□□□ -0.53
RUNX1T1-245ENST00000523290 WRNQ14191 1432 aaPredicted RBP eCLIP11.67□□□□□ -0.54
RUNX1T1-245ENST00000523290 ABCC8Q09428 1581 aa11.66□□□□□ -0.54
RUNX1T1-245ENST00000523290 LAMC3Q9Y6N6 1575 aa11.63□□□□□ -0.55
RUNX1T1-245ENST00000523290 PRDM2Q13029 1718 aa11.62□□□□□ -0.55
RUNX1T1-245ENST00000523290 FANCD2Q9BXW9 1451 aa11.59□□□□□ -0.55
RUNX1T1-245ENST00000523290 NESP48681 1621 aa11.59□□□□□ -0.55
RUNX1T1-245ENST00000523290 PDS5BQ9NTI5 1447 aa11.58□□□□□ -0.56
RUNX1T1-245ENST00000523290 SYNJ1O43426 1573 aa11.57□□□□□ -0.56
RUNX1T1-245ENST00000523290 TOP2BQ02880 1626 aa11.56□□□□□ -0.56
RUNX1T1-245ENST00000523290 BIVM-ERCC5R4GMW8 1640 aa11.54□□□□□ -0.56
RUNX1T1-245ENST00000523290 CUX1P39880 1505 aa11.53□□□□□ -0.56
RUNX1T1-245ENST00000523290 CEP164Q9UPV0 1460 aa11.53□□□□□ -0.56
RUNX1T1-245ENST00000523290 EEA1Q15075 1411 aa11.52□□□□□ -0.57
RUNX1T1-245ENST00000523290 FAM9AQ8IZU1 332 aaPredicted RBP11.48□□□□□ -0.57
RUNX1T1-245ENST00000523290 DNMBPQ6XZF7 1577 aa11.47□□□□□ -0.57
RUNX1T1-245ENST00000523290 SOGA1O94964 1423 aa11.47□□□□□ -0.57
RUNX1T1-245ENST00000523290 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
RUNX1T1-245ENST00000523290 CSRNP3Q8WYN3 585 aa11.44□□□□□ -0.58
RUNX1T1-245ENST00000523290 URB2Q14146 1524 aaKnown RBP11.43□□□□□ -0.58
RUNX1T1-245ENST00000523290 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
RUNX1T1-245ENST00000523290 LOC105371045A0A1W2PR82 267 aa11.42□□□□□ -0.58
RUNX1T1-245ENST00000523290 KIF21AQ7Z4S6 1674 aa11.42□□□□□ -0.58
RUNX1T1-245ENST00000523290 MRC2Q9UBG0 1479 aa11.41□□□□□ -0.58
RUNX1T1-245ENST00000523290 RUSC2Q8N2Y8 1516 aa11.4□□□□□ -0.58
RUNX1T1-245ENST00000523290 KIF27Q86VH2 1401 aa11.4□□□□□ -0.58
RUNX1T1-245ENST00000523290 ERCC6Q03468 1493 aa11.39□□□□□ -0.59
RUNX1T1-245ENST00000523290 POLA1P09884 1462 aaPredicted RBP11.38□□□□□ -0.59
RUNX1T1-245ENST00000523290 CUX2O14529 1486 aa11.35□□□□□ -0.59
RUNX1T1-245ENST00000523290 ABCA10Q8WWZ4 1543 aa11.35□□□□□ -0.59
RUNX1T1-245ENST00000523290 WDR62O43379 1518 aa11.34□□□□□ -0.59
RUNX1T1-245ENST00000523290 RAD54L2Q9Y4B4 1467 aa11.33□□□□□ -0.6
RUNX1T1-245ENST00000523290 GOLGA3Q08378 1498 aa11.31□□□□□ -0.6
RUNX1T1-245ENST00000523290 KIF21BO75037 1637 aa11.31□□□□□ -0.6
RUNX1T1-245ENST00000523290 FOXD1Q16676 465 aa11.3□□□□□ -0.6
RUNX1T1-245ENST00000523290 IGF1RP08069 1367 aa11.29□□□□□ -0.6
RUNX1T1-245ENST00000523290 PRXQ9BXM0 1461 aa11.29□□□□□ -0.6
RUNX1T1-245ENST00000523290 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
RUNX1T1-245ENST00000523290 EHMT2Q96KQ7 1210 aa11.28□□□□□ -0.6
RUNX1T1-245ENST00000523290 IFT140Q96RY7 1462 aa11.28□□□□□ -0.6
RUNX1T1-245ENST00000523290 TNIKQ9UKE5 1360 aa11.28□□□□□ -0.6
RUNX1T1-245ENST00000523290 UBTFP17480 764 aaKnown RBP11.26□□□□□ -0.61
RUNX1T1-245ENST00000523290 ERICH3Q5RHP9 1530 aa11.26□□□□□ -0.61
RUNX1T1-245ENST00000523290 WDR97A6NE52 1622 aa11.26□□□□□ -0.61
RUNX1T1-245ENST00000523290 TARBP1Q13395 1621 aaKnown RBP11.26□□□□□ -0.61
RUNX1T1-245ENST00000523290 TDRD9Q8NDG6 1382 aaKnown RBP11.24□□□□□ -0.61
RUNX1T1-245ENST00000523290 RAPGEF2Q9Y4G8 1499 aa11.24□□□□□ -0.61
RUNX1T1-245ENST00000523290 CARMIL1Q5VZK9 1371 aa11.24□□□□□ -0.61
RUNX1T1-245ENST00000523290 GAPVD1Q14C86 1478 aa11.23□□□□□ -0.61
RUNX1T1-245ENST00000523290 ABCA5Q8WWZ7 1642 aa11.22□□□□□ -0.61
RUNX1T1-245ENST00000523290 PLPPR3Q6T4P5 718 aa11.19□□□□□ -0.62
RUNX1T1-245ENST00000523290 CUL7Q14999 1698 aa11.19□□□□□ -0.62
RUNX1T1-245ENST00000523290 CEP162Q5TB80 1403 aa11.18□□□□□ -0.62
RUNX1T1-245ENST00000523290 GRIN2BQ13224 1484 aa11.18□□□□□ -0.62
RUNX1T1-245ENST00000523290 AQRO60306 1485 aaKnown RBP eCLIP11.17□□□□□ -0.62
RUNX1T1-245ENST00000523290 ZNF608Q9ULD9 1512 aaPredicted RBP11.16□□□□□ -0.62
RUNX1T1-245ENST00000523290 FHAD1B1AJZ9 1412 aa11.14□□□□□ -0.63
RUNX1T1-245ENST00000523290 PBRM1Q86U86 1689 aa11.12□□□□□ -0.63
RUNX1T1-245ENST00000523290 CLIP1P30622 1438 aa11.12□□□□□ -0.63
RUNX1T1-245ENST00000523290 EIF4G3O43432 1585 aaKnown RBP11.11□□□□□ -0.63
RUNX1T1-245ENST00000523290 ADAMTS12P58397 1594 aa11.09□□□□□ -0.63
RUNX1T1-245ENST00000523290 MAGI1Q96QZ7 1491 aaPredicted RBP11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms