RNA–Protein interactions for RNA: ENST00000523259.5

SRA1-203, Transcript of steroid receptor RNA activator 1, humanhuman

TSL 5

Gene SRA1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRA1-203ENST00000523259 NISCHQ9Y2I1 1504 aa34.56■■■■□ 3.12
SRA1-203ENST00000523259 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
SRA1-203ENST00000523259 ABCC9O60706 1549 aa29.58■■■□□ 2.33
SRA1-203ENST00000523259 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
SRA1-203ENST00000523259 DCAF8L2P0C7V8 631 aa28.78■■■□□ 2.2
SRA1-203ENST00000523259 NACADO15069 1562 aa28.68■■■□□ 2.18
SRA1-203ENST00000523259 RB1CC1Q8TDY2 1594 aa28.63■■■□□ 2.17
SRA1-203ENST00000523259 DCAF1Q9Y4B6 1507 aa28.62■■■□□ 2.17
SRA1-203ENST00000523259 MYO15BQ96JP2 1530 aa28.6■■■□□ 2.17
SRA1-203ENST00000523259 UNC13AQ9UPW8 1703 aa27.99■■■□□ 2.07
SRA1-203ENST00000523259 SCRIBQ14160 1630 aa27.93■■■□□ 2.06
SRA1-203ENST00000523259 BICRAQ9NZM4 1560 aa27.72■■■□□ 2.03
SRA1-203ENST00000523259 PABPN1Q86U42 306 aaKnown RBP eCLIP27.7■■■□□ 2.02
SRA1-203ENST00000523259 SHROOM4Q9ULL8 1493 aa27.51■■■□□ 2
SRA1-203ENST00000523259 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
SRA1-203ENST00000523259 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
SRA1-203ENST00000523259 DNAJC5BQ9UF47 199 aa26.81■■□□□ 1.88
SRA1-203ENST00000523259 CC2D2AQ9P2K1 1620 aa26.78■■□□□ 1.88
SRA1-203ENST00000523259 BAZ1AQ9NRL2 1556 aaPredicted RBP26.78■■□□□ 1.88
SRA1-203ENST00000523259 SMARCA4P51532 1647 aa26.75■■□□□ 1.87
SRA1-203ENST00000523259 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
SRA1-203ENST00000523259 SMARCA2P51531 1590 aa26.52■■□□□ 1.84
SRA1-203ENST00000523259 ATAD2BQ9ULI0 1458 aa26.51■■□□□ 1.83
SRA1-203ENST00000523259 PEG3Q9GZU2 1588 aa26.47■■□□□ 1.83
SRA1-203ENST00000523259 RSF1Q96T23 1441 aaPredicted RBP26.45■■□□□ 1.83
SRA1-203ENST00000523259 NCAPD3P42695 1498 aa26.44■■□□□ 1.82
SRA1-203ENST00000523259 WIZO95785 1651 aa26.38■■□□□ 1.81
SRA1-203ENST00000523259 HMGXB3Q12766 1538 aa26.35■■□□□ 1.81
SRA1-203ENST00000523259 BAZ1BQ9UIG0 1483 aaKnown RBP26.32■■□□□ 1.8
SRA1-203ENST00000523259 TOP2AP11388 1531 aaKnown RBP26.12■■□□□ 1.77
SRA1-203ENST00000523259 SUPT5HO00267 1087 aaKnown RBP26.09■■□□□ 1.77
SRA1-203ENST00000523259 CCDC88BA6NC98 1476 aa25.81■■□□□ 1.72
SRA1-203ENST00000523259 LAMC3Q9Y6N6 1575 aa25.7■■□□□ 1.71
SRA1-203ENST00000523259 CADPSQ9ULU8 1353 aa25.7■■□□□ 1.7
SRA1-203ENST00000523259 NESP48681 1621 aa25.69■■□□□ 1.7
SRA1-203ENST00000523259 CFTRP13569 1480 aa25.61■■□□□ 1.69
SRA1-203ENST00000523259 PDS5BQ9NTI5 1447 aa25.53■■□□□ 1.68
SRA1-203ENST00000523259 ERCC6Q03468 1493 aa25.5■■□□□ 1.67
SRA1-203ENST00000523259 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
SRA1-203ENST00000523259 KIF21AQ7Z4S6 1674 aa25.43■■□□□ 1.66
SRA1-203ENST00000523259 FANCD2Q9BXW9 1451 aa25.41■■□□□ 1.66
SRA1-203ENST00000523259 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
SRA1-203ENST00000523259 MRC2Q9UBG0 1479 aa25.23■■□□□ 1.63
SRA1-203ENST00000523259 THOC2Q8NI27 1593 aaKnown RBP25.23■■□□□ 1.63
SRA1-203ENST00000523259 WDR62O43379 1518 aa25.13■■□□□ 1.61
SRA1-203ENST00000523259 URB2Q14146 1524 aaKnown RBP25.11■■□□□ 1.61
SRA1-203ENST00000523259 CUX2O14529 1486 aa25.09■■□□□ 1.61
SRA1-203ENST00000523259 ABCC8Q09428 1581 aa25.08■■□□□ 1.61
SRA1-203ENST00000523259 DNMBPQ6XZF7 1577 aa25.04■■□□□ 1.6
SRA1-203ENST00000523259 TOPBP1Q92547 1522 aa25.03■■□□□ 1.6
SRA1-203ENST00000523259 CUX1P39880 1505 aa24.96■■□□□ 1.59
SRA1-203ENST00000523259 WRNQ14191 1432 aaPredicted RBP eCLIP24.95■■□□□ 1.59
SRA1-203ENST00000523259 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
SRA1-203ENST00000523259 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
SRA1-203ENST00000523259 SYNJ1O43426 1573 aa24.86■■□□□ 1.57
SRA1-203ENST00000523259 POLA1P09884 1462 aaPredicted RBP24.84■■□□□ 1.57
SRA1-203ENST00000523259 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.57
SRA1-203ENST00000523259 IFT140Q96RY7 1462 aa24.8■■□□□ 1.56
SRA1-203ENST00000523259 SOGA1O94964 1423 aa24.77■■□□□ 1.56
SRA1-203ENST00000523259 TARBP1Q13395 1621 aaKnown RBP24.73■■□□□ 1.55
SRA1-203ENST00000523259 RAD54L2Q9Y4B4 1467 aa24.73■■□□□ 1.55
SRA1-203ENST00000523259 TRIM41Q8WV44 630 aa24.64■■□□□ 1.54
SRA1-203ENST00000523259 ZNF608Q9ULD9 1512 aaPredicted RBP24.63■■□□□ 1.53
SRA1-203ENST00000523259 WDR97A6NE52 1622 aa24.62■■□□□ 1.53
SRA1-203ENST00000523259 ABCA10Q8WWZ4 1543 aa24.61■■□□□ 1.53
SRA1-203ENST00000523259 TDRD9Q8NDG6 1382 aaKnown RBP24.57■■□□□ 1.52
SRA1-203ENST00000523259 EIF4G3O43432 1585 aaKnown RBP24.57■■□□□ 1.52
SRA1-203ENST00000523259 AQRO60306 1485 aaKnown RBP eCLIP24.55■■□□□ 1.522e-6■■■□□ 16.6
SRA1-203ENST00000523259 CHIC1Q5VXU3 224 aa24.54■■□□□ 1.52
SRA1-203ENST00000523259 GAPVD1Q14C86 1478 aa24.48■■□□□ 1.51
SRA1-203ENST00000523259 ABCA5Q8WWZ7 1642 aa24.48■■□□□ 1.51
SRA1-203ENST00000523259 GRIN2BQ13224 1484 aa24.43■■□□□ 1.5
SRA1-203ENST00000523259 PBRM1Q86U86 1689 aa24.42■■□□□ 1.5
SRA1-203ENST00000523259 KIF27Q86VH2 1401 aa24.42■■□□□ 1.5
SRA1-203ENST00000523259 ERICH3Q5RHP9 1530 aa24.33■■□□□ 1.49
SRA1-203ENST00000523259 SNAPC4Q5SXM2 1469 aa24.33■■□□□ 1.49
SRA1-203ENST00000523259 MAGI1Q96QZ7 1491 aaPredicted RBP24.33■■□□□ 1.48
SRA1-203ENST00000523259 RUSC2Q8N2Y8 1516 aa24.27■■□□□ 1.48
SRA1-203ENST00000523259 IGF1RP08069 1367 aa24.25■■□□□ 1.47
SRA1-203ENST00000523259 SYNJ2O15056 1496 aa24.23■■□□□ 1.47
SRA1-203ENST00000523259 FBLN2P98095 1184 aa24.23■■□□□ 1.47
SRA1-203ENST00000523259 ADAMTS12P58397 1594 aa24.22■■□□□ 1.47
SRA1-203ENST00000523259 CHMP7Q8WUX9 453 aaPredicted RBP24.21■■□□□ 1.47
SRA1-203ENST00000523259 CHD1O14646 1710 aa24.21■■□□□ 1.47
SRA1-203ENST00000523259 FHAD1B1AJZ9 1412 aa24.21■■□□□ 1.47
SRA1-203ENST00000523259 CUL7Q14999 1698 aa24.2■■□□□ 1.46
SRA1-203ENST00000523259 EEA1Q15075 1411 aa24.18■■□□□ 1.46
SRA1-203ENST00000523259 CARMIL1Q5VZK9 1371 aa24.13■■□□□ 1.45
SRA1-203ENST00000523259 OSCARQ8IYS5 282 aa24.13■■□□□ 1.45
SRA1-203ENST00000523259 GRIN2AQ12879 1464 aa24.11■■□□□ 1.45
SRA1-203ENST00000523259 FAM9AQ8IZU1 332 aaPredicted RBP24.1■■□□□ 1.45
SRA1-203ENST00000523259 CSRNP3Q8WYN3 585 aa24.1■■□□□ 1.45
SRA1-203ENST00000523259 RAPGEF2Q9Y4G8 1499 aa24.03■■□□□ 1.44
SRA1-203ENST00000523259 PRXQ9BXM0 1461 aa24.01■■□□□ 1.43
SRA1-203ENST00000523259 NUP160Q12769 1436 aa23.97■■□□□ 1.43
SRA1-203ENST00000523259 CEP170Q5SW79 1584 aa23.96■■□□□ 1.43
SRA1-203ENST00000523259 CLASP1Q7Z460 1538 aa23.92■■□□□ 1.42
SRA1-203ENST00000523259 DNAJC5Q9H3Z4 198 aa23.91■■□□□ 1.42
SRA1-203ENST00000523259 KIF21BO75037 1637 aa23.9■■□□□ 1.42
SRA1-203ENST00000523259 KIAA0586Q9BVV6 1533 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms