RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
ERGIC1-211ENST00000523215 CCDC180Q9P1Z9 1646 aa20.06■□□□□ 0.8
ERGIC1-211ENST00000523215 ZCCHC6Q5VYS8 1495 aaKnown RBP19.51■□□□□ 0.71
ERGIC1-211ENST00000523215 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
ERGIC1-211ENST00000523215 MYO15BQ96JP2 1530 aa18.96■□□□□ 0.63
ERGIC1-211ENST00000523215 ABCC9O60706 1549 aa18.54■□□□□ 0.56
ERGIC1-211ENST00000523215 SHROOM4Q9ULL8 1493 aa18.22■□□□□ 0.51
ERGIC1-211ENST00000523215 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
ERGIC1-211ENST00000523215 NACADO15069 1562 aa18.03■□□□□ 0.48
ERGIC1-211ENST00000523215 RB1CC1Q8TDY2 1594 aa17.98■□□□□ 0.47
ERGIC1-211ENST00000523215 SLC24A1O60721 1099 aa17.93■□□□□ 0.46
ERGIC1-211ENST00000523215 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
ERGIC1-211ENST00000523215 CHIC1Q5VXU3 224 aa17.77■□□□□ 0.44
ERGIC1-211ENST00000523215 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
ERGIC1-211ENST00000523215 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
ERGIC1-211ENST00000523215 SUPT5HO00267 1087 aaKnown RBP17.71■□□□□ 0.43
ERGIC1-211ENST00000523215 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
ERGIC1-211ENST00000523215 SCRIBQ14160 1630 aa17.6■□□□□ 0.41
ERGIC1-211ENST00000523215 PELP1Q8IZL8 1130 aaKnown RBP17.54■□□□□ 0.4
ERGIC1-211ENST00000523215 MYT1Q01538 1121 aa17.5■□□□□ 0.39
ERGIC1-211ENST00000523215 HRCP23327 699 aa17.47■□□□□ 0.39
ERGIC1-211ENST00000523215 DCAF8L2P0C7V8 631 aa17.46■□□□□ 0.38
ERGIC1-211ENST00000523215 TOP2AP11388 1531 aaKnown RBP17.46■□□□□ 0.38
ERGIC1-211ENST00000523215 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
ERGIC1-211ENST00000523215 WIZO95785 1651 aa17.42■□□□□ 0.38
ERGIC1-211ENST00000523215 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
ERGIC1-211ENST00000523215 SMARCA2P51531 1590 aa17.32■□□□□ 0.36
ERGIC1-211ENST00000523215 TTBK1Q5TCY1 1321 aaPredicted RBP17.29■□□□□ 0.36
ERGIC1-211ENST00000523215 PRKCSHP14314 528 aaPredicted RBP17.29■□□□□ 0.36
ERGIC1-211ENST00000523215 BICRAQ9NZM4 1560 aa17.27■□□□□ 0.36
ERGIC1-211ENST00000523215 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
ERGIC1-211ENST00000523215 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
ERGIC1-211ENST00000523215 APLP2Q06481 763 aa17.15■□□□□ 0.34
ERGIC1-211ENST00000523215 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
ERGIC1-211ENST00000523215 KIF21BO75037 1637 aa17.09■□□□□ 0.33
ERGIC1-211ENST00000523215 BIVM-ERCC5R4GMW8 1640 aa17.05■□□□□ 0.32
ERGIC1-211ENST00000523215 EEA1Q15075 1411 aa17■□□□□ 0.31
ERGIC1-211ENST00000523215 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
ERGIC1-211ENST00000523215 TRIM26Q12899 539 aaPredicted RBP16.91■□□□□ 0.3
ERGIC1-211ENST00000523215 DAXXQ9UER7 740 aaPredicted RBP16.84■□□□□ 0.29
ERGIC1-211ENST00000523215 LOC105371045A0A1W2PR82 267 aa16.83■□□□□ 0.28
ERGIC1-211ENST00000523215 HMGXB3Q12766 1538 aa16.83■□□□□ 0.28
ERGIC1-211ENST00000523215 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
ERGIC1-211ENST00000523215 BAZ1BQ9UIG0 1483 aaKnown RBP16.83■□□□□ 0.28
ERGIC1-211ENST00000523215 SYNJ1O43426 1573 aa16.78■□□□□ 0.28
ERGIC1-211ENST00000523215 ERICH3Q5RHP9 1530 aa16.76■□□□□ 0.27
ERGIC1-211ENST00000523215 TNIKQ9UKE5 1360 aa16.73■□□□□ 0.27
ERGIC1-211ENST00000523215 ZEB1P37275 1124 aaPredicted RBP16.72■□□□□ 0.27
ERGIC1-211ENST00000523215 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
ERGIC1-211ENST00000523215 PCGF6Q9BYE7 350 aa16.65■□□□□ 0.26
ERGIC1-211ENST00000523215 ATAD2BQ9ULI0 1458 aa16.62■□□□□ 0.25
ERGIC1-211ENST00000523215 CUX2O14529 1486 aa16.61■□□□□ 0.25
ERGIC1-211ENST00000523215 ERICH6Q7L0X2 663 aa16.6■□□□□ 0.25
ERGIC1-211ENST00000523215 GOLGA3Q08378 1498 aa16.58■□□□□ 0.24
ERGIC1-211ENST00000523215 CEP162Q5TB80 1403 aa16.53■□□□□ 0.24
ERGIC1-211ENST00000523215 MAP3K1Q13233 1512 aa16.53■□□□□ 0.24
ERGIC1-211ENST00000523215 CEP164Q9UPV0 1460 aa16.53■□□□□ 0.24
ERGIC1-211ENST00000523215 TRIM41Q8WV44 630 aa16.52■□□□□ 0.24
ERGIC1-211ENST00000523215 NCAPD3P42695 1498 aa16.5■□□□□ 0.23
ERGIC1-211ENST00000523215 PRXQ9BXM0 1461 aa16.5■□□□□ 0.23
ERGIC1-211ENST00000523215 WDR97A6NE52 1622 aa16.44■□□□□ 0.22
ERGIC1-211ENST00000523215 SOGA1O94964 1423 aa16.44■□□□□ 0.22
ERGIC1-211ENST00000523215 PPARGC1BQ86YN6 1023 aaKnown RBP16.42■□□□□ 0.22
ERGIC1-211ENST00000523215 CFAP43Q8NDM7 1665 aa16.41■□□□□ 0.22
ERGIC1-211ENST00000523215 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
ERGIC1-211ENST00000523215 VPS8Q8N3P4 1428 aa16.35■□□□□ 0.21
ERGIC1-211ENST00000523215 CFTRP13569 1480 aa16.34■□□□□ 0.21
ERGIC1-211ENST00000523215 CUX1P39880 1505 aa16.33■□□□□ 0.2
ERGIC1-211ENST00000523215 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
ERGIC1-211ENST00000523215 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
ERGIC1-211ENST00000523215 KIF21AQ7Z4S6 1674 aa16.28■□□□□ 0.2
ERGIC1-211ENST00000523215 RRBP1Q9P2E9 1410 aaKnown RBP16.27■□□□□ 0.2
ERGIC1-211ENST00000523215 PABPN1Q86U42 306 aaKnown RBP eCLIP16.25■□□□□ 0.19
ERGIC1-211ENST00000523215 CLIP1P30622 1438 aa16.24■□□□□ 0.19
ERGIC1-211ENST00000523215 CC2D2AQ9P2K1 1620 aa16.22■□□□□ 0.19
ERGIC1-211ENST00000523215 RAPGEF2Q9Y4G8 1499 aa16.19■□□□□ 0.18
ERGIC1-211ENST00000523215 CTTNBP2Q8WZ74 1663 aa16.18■□□□□ 0.18
ERGIC1-211ENST00000523215 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
ERGIC1-211ENST00000523215 CUL7Q14999 1698 aa16.15■□□□□ 0.18
ERGIC1-211ENST00000523215 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.17
ERGIC1-211ENST00000523215 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
ERGIC1-211ENST00000523215 LRRIQ1Q96JM4 1722 aa16.11■□□□□ 0.17
ERGIC1-211ENST00000523215 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
ERGIC1-211ENST00000523215 TIAM1Q13009 1591 aa16.1■□□□□ 0.17
ERGIC1-211ENST00000523215 SAMD9Q5K651 1589 aa16.1■□□□□ 0.17
ERGIC1-211ENST00000523215 THOC2Q8NI27 1593 aaKnown RBP16.1■□□□□ 0.17
ERGIC1-211ENST00000523215 ABCA5Q8WWZ7 1642 aa16.06■□□□□ 0.16
ERGIC1-211ENST00000523215 EFCAB5A4FU69 1503 aa16.06■□□□□ 0.16
ERGIC1-211ENST00000523215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.05■□□□□ 0.16
ERGIC1-211ENST00000523215 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
ERGIC1-211ENST00000523215 BCL11AQ9H165 835 aa16.03■□□□□ 0.16
ERGIC1-211ENST00000523215 DNMBPQ6XZF7 1577 aa16.01■□□□□ 0.15
ERGIC1-211ENST00000523215 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
ERGIC1-211ENST00000523215 MAPKBP1O60336 1514 aa15.99■□□□□ 0.15
ERGIC1-211ENST00000523215 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
ERGIC1-211ENST00000523215 ABCA10Q8WWZ4 1543 aa15.97■□□□□ 0.15
ERGIC1-211ENST00000523215 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
ERGIC1-211ENST00000523215 POLR1AO95602 1720 aaPredicted RBP15.93■□□□□ 0.14
ERGIC1-211ENST00000523215 GCC2Q8IWJ2 1684 aa15.91■□□□□ 0.14
ERGIC1-211ENST00000523215 LAMC3Q9Y6N6 1575 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms