RNA–Protein interactions for RNA: ENST00000522715.1

AP003356.1-201, humanhuman

TSL 3

Gene AP003356.1, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003356.1-201ENST00000522715 NISCHQ9Y2I1 1504 aa14.65□□□□□ -0.06
AP003356.1-201ENST00000522715 CCDC180Q9P1Z9 1646 aa12.92□□□□□ -0.34
AP003356.1-201ENST00000522715 ABCC9O60706 1549 aa12.63□□□□□ -0.39
AP003356.1-201ENST00000522715 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
AP003356.1-201ENST00000522715 ZCCHC6Q5VYS8 1495 aaKnown RBP12.2□□□□□ -0.46
AP003356.1-201ENST00000522715 NACADO15069 1562 aa12.18□□□□□ -0.46
AP003356.1-201ENST00000522715 RB1CC1Q8TDY2 1594 aa12.16□□□□□ -0.46
AP003356.1-201ENST00000522715 MYO15BQ96JP2 1530 aa12.15□□□□□ -0.46
AP003356.1-201ENST00000522715 DCAF1Q9Y4B6 1507 aa12.11□□□□□ -0.47
AP003356.1-201ENST00000522715 PABPN1Q86U42 306 aaKnown RBP eCLIP11.86□□□□□ -0.51
AP003356.1-201ENST00000522715 UNC13AQ9UPW8 1703 aa11.83□□□□□ -0.52
AP003356.1-201ENST00000522715 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
AP003356.1-201ENST00000522715 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
AP003356.1-201ENST00000522715 SHROOM4Q9ULL8 1493 aa11.68□□□□□ -0.54
AP003356.1-201ENST00000522715 DNAJC5BQ9UF47 199 aa11.61□□□□□ -0.55
AP003356.1-201ENST00000522715 EIF4G1Q04637 1599 aaKnown RBP11.48□□□□□ -0.57
AP003356.1-201ENST00000522715 CECR2Q9BXF3 1484 aa11.43□□□□□ -0.58
AP003356.1-201ENST00000522715 CC2D2AQ9P2K1 1620 aa11.41□□□□□ -0.58
AP003356.1-201ENST00000522715 BAZ1AQ9NRL2 1556 aaPredicted RBP11.33□□□□□ -0.6
AP003356.1-201ENST00000522715 SMARCA4P51532 1647 aa11.31□□□□□ -0.6
AP003356.1-201ENST00000522715 MROH2BQ7Z745 1585 aa11.29□□□□□ -0.6
AP003356.1-201ENST00000522715 NCAPD3P42695 1498 aa11.28□□□□□ -0.6
AP003356.1-201ENST00000522715 ATAD2BQ9ULI0 1458 aa11.28□□□□□ -0.6
AP003356.1-201ENST00000522715 SMARCA2P51531 1590 aa11.24□□□□□ -0.61
AP003356.1-201ENST00000522715 PEG3Q9GZU2 1588 aa11.22□□□□□ -0.61
AP003356.1-201ENST00000522715 RSF1Q96T23 1441 aaPredicted RBP11.21□□□□□ -0.61
AP003356.1-201ENST00000522715 HMGXB3Q12766 1538 aa11.18□□□□□ -0.62
AP003356.1-201ENST00000522715 BAZ1BQ9UIG0 1483 aaKnown RBP11.17□□□□□ -0.62
AP003356.1-201ENST00000522715 WIZO95785 1651 aa11.14□□□□□ -0.63
AP003356.1-201ENST00000522715 AEBP2Q6ZN18 517 aaPredicted RBP11.1□□□□□ -0.63
AP003356.1-201ENST00000522715 TOP2AP11388 1531 aaKnown RBP11.03□□□□□ -0.64
AP003356.1-201ENST00000522715 SUPT5HO00267 1087 aaKnown RBP11□□□□□ -0.65
AP003356.1-201ENST00000522715 NESP48681 1621 aa10.96□□□□□ -0.65
AP003356.1-201ENST00000522715 CADPSQ9ULU8 1353 aa10.96□□□□□ -0.65
AP003356.1-201ENST00000522715 CCDC88BA6NC98 1476 aa10.94□□□□□ -0.66
AP003356.1-201ENST00000522715 LAMC3Q9Y6N6 1575 aa10.91□□□□□ -0.66
AP003356.1-201ENST00000522715 CFTRP13569 1480 aa10.89□□□□□ -0.67
AP003356.1-201ENST00000522715 PDS5BQ9NTI5 1447 aa10.88□□□□□ -0.67
AP003356.1-201ENST00000522715 ERCC6Q03468 1493 aa10.87□□□□□ -0.67
AP003356.1-201ENST00000522715 FANCD2Q9BXW9 1451 aa10.8□□□□□ -0.68
AP003356.1-201ENST00000522715 KIF21AQ7Z4S6 1674 aa10.76□□□□□ -0.69
AP003356.1-201ENST00000522715 CEP164Q9UPV0 1460 aa10.76□□□□□ -0.69
AP003356.1-201ENST00000522715 MRC2Q9UBG0 1479 aa10.74□□□□□ -0.69
AP003356.1-201ENST00000522715 CUX2O14529 1486 aa10.74□□□□□ -0.69
AP003356.1-201ENST00000522715 THOC2Q8NI27 1593 aaKnown RBP10.73□□□□□ -0.69
AP003356.1-201ENST00000522715 PRDM2Q13029 1718 aa10.7□□□□□ -0.7
AP003356.1-201ENST00000522715 WDR62O43379 1518 aa10.68□□□□□ -0.7
AP003356.1-201ENST00000522715 URB2Q14146 1524 aaKnown RBP10.68□□□□□ -0.7
AP003356.1-201ENST00000522715 CHIC1Q5VXU3 224 aa10.65□□□□□ -0.7
AP003356.1-201ENST00000522715 ABCC8Q09428 1581 aa10.65□□□□□ -0.71
AP003356.1-201ENST00000522715 TOPBP1Q92547 1522 aa10.63□□□□□ -0.71
AP003356.1-201ENST00000522715 DNMBPQ6XZF7 1577 aa10.6□□□□□ -0.71
AP003356.1-201ENST00000522715 CUX1P39880 1505 aa10.58□□□□□ -0.72
AP003356.1-201ENST00000522715 IFT140Q96RY7 1462 aa10.55□□□□□ -0.72
AP003356.1-201ENST00000522715 WRNQ14191 1432 aaPredicted RBP eCLIP10.55□□□□□ -0.72
AP003356.1-201ENST00000522715 POLA1P09884 1462 aaPredicted RBP10.55□□□□□ -0.72
AP003356.1-201ENST00000522715 SOGA1O94964 1423 aa10.54□□□□□ -0.72
AP003356.1-201ENST00000522715 FGD5Q6ZNL6 1462 aa10.53□□□□□ -0.72
AP003356.1-201ENST00000522715 RAD54L2Q9Y4B4 1467 aa10.52□□□□□ -0.73
AP003356.1-201ENST00000522715 ZNF608Q9ULD9 1512 aaPredicted RBP10.5□□□□□ -0.73
AP003356.1-201ENST00000522715 TARBP1Q13395 1621 aaKnown RBP10.49□□□□□ -0.73
AP003356.1-201ENST00000522715 SYNJ1O43426 1573 aa10.48□□□□□ -0.73
AP003356.1-201ENST00000522715 TOP2BQ02880 1626 aa10.48□□□□□ -0.73
AP003356.1-201ENST00000522715 TDRD9Q8NDG6 1382 aaKnown RBP10.47□□□□□ -0.73
AP003356.1-201ENST00000522715 AQRO60306 1485 aaKnown RBP eCLIP10.47□□□□□ -0.73
AP003356.1-201ENST00000522715 BIVM-ERCC5R4GMW8 1640 aa10.47□□□□□ -0.73
AP003356.1-201ENST00000522715 ABCA10Q8WWZ4 1543 aa10.44□□□□□ -0.74
AP003356.1-201ENST00000522715 EIF4G3O43432 1585 aaKnown RBP10.41□□□□□ -0.74
AP003356.1-201ENST00000522715 WDR97A6NE52 1622 aa10.4□□□□□ -0.75
AP003356.1-201ENST00000522715 GAPVD1Q14C86 1478 aa10.39□□□□□ -0.75
AP003356.1-201ENST00000522715 TRIM41Q8WV44 630 aa10.39□□□□□ -0.75
AP003356.1-201ENST00000522715 DNAJC5Q9H3Z4 198 aa10.39□□□□□ -0.75
AP003356.1-201ENST00000522715 GRIN2BQ13224 1484 aa10.38□□□□□ -0.75
AP003356.1-201ENST00000522715 OSCARQ8IYS5 282 aa10.36□□□□□ -0.75
AP003356.1-201ENST00000522715 ABCA5Q8WWZ7 1642 aa10.35□□□□□ -0.75
AP003356.1-201ENST00000522715 FBLN2P98095 1184 aa10.34□□□□□ -0.75
AP003356.1-201ENST00000522715 SNAPC4Q5SXM2 1469 aa10.34□□□□□ -0.75
AP003356.1-201ENST00000522715 CHMP7Q8WUX9 453 aaPredicted RBP10.33□□□□□ -0.76
AP003356.1-201ENST00000522715 MAGI1Q96QZ7 1491 aaPredicted RBP10.33□□□□□ -0.76
AP003356.1-201ENST00000522715 KIF27Q86VH2 1401 aa10.33□□□□□ -0.76
AP003356.1-201ENST00000522715 IGF1RP08069 1367 aa10.31□□□□□ -0.76
AP003356.1-201ENST00000522715 ERICH3Q5RHP9 1530 aa10.3□□□□□ -0.76
AP003356.1-201ENST00000522715 SYNJ2O15056 1496 aa10.3□□□□□ -0.76
AP003356.1-201ENST00000522715 PBRM1Q86U86 1689 aa10.28□□□□□ -0.76
AP003356.1-201ENST00000522715 FHAD1B1AJZ9 1412 aa10.28□□□□□ -0.76
AP003356.1-201ENST00000522715 RUSC2Q8N2Y8 1516 aa10.27□□□□□ -0.77
AP003356.1-201ENST00000522715 CHD1O14646 1710 aa10.24□□□□□ -0.77
AP003356.1-201ENST00000522715 ADAMTS12P58397 1594 aa10.24□□□□□ -0.77
AP003356.1-201ENST00000522715 CARMIL1Q5VZK9 1371 aa10.24□□□□□ -0.77
AP003356.1-201ENST00000522715 GRIN2AQ12879 1464 aa10.23□□□□□ -0.77
AP003356.1-201ENST00000522715 NUP160Q12769 1436 aa10.21□□□□□ -0.78
AP003356.1-201ENST00000522715 CSRNP3Q8WYN3 585 aa10.2□□□□□ -0.78
AP003356.1-201ENST00000522715 CUL7Q14999 1698 aa10.18□□□□□ -0.78
AP003356.1-201ENST00000522715 CLASP1Q7Z460 1538 aa10.18□□□□□ -0.78
AP003356.1-201ENST00000522715 EEA1Q15075 1411 aa10.18□□□□□ -0.78
AP003356.1-201ENST00000522715 FAM9AQ8IZU1 332 aaPredicted RBP10.17□□□□□ -0.78
AP003356.1-201ENST00000522715 CEP170Q5SW79 1584 aa10.17□□□□□ -0.78
AP003356.1-201ENST00000522715 RAPGEF2Q9Y4G8 1499 aa10.17□□□□□ -0.78
AP003356.1-201ENST00000522715 PRXQ9BXM0 1461 aa10.16□□□□□ -0.78
AP003356.1-201ENST00000522715 JPH4Q96JJ6 628 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms