RNA–Protein interactions for RNA: ENST00000522574.5

TNIP1-215, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 2

Gene TNIP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-215ENST00000522574 NISCHQ9Y2I1 1504 aa22.19■■□□□ 1.14
TNIP1-215ENST00000522574 CCDC180Q9P1Z9 1646 aa19.48■□□□□ 0.71
TNIP1-215ENST00000522574 ABCC9O60706 1549 aa18.83■□□□□ 0.61
TNIP1-215ENST00000522574 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
TNIP1-215ENST00000522574 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
TNIP1-215ENST00000522574 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.53
TNIP1-215ENST00000522574 MYO15BQ96JP2 1530 aa18.36■□□□□ 0.53
TNIP1-215ENST00000522574 NACADO15069 1562 aa18.32■□□□□ 0.52
TNIP1-215ENST00000522574 DNAJC5BQ9UF47 199 aa18.32■□□□□ 0.52
TNIP1-215ENST00000522574 RB1CC1Q8TDY2 1594 aa18.23■□□□□ 0.51
TNIP1-215ENST00000522574 SCRIBQ14160 1630 aa17.8■□□□□ 0.44
TNIP1-215ENST00000522574 SHROOM4Q9ULL8 1493 aa17.73■□□□□ 0.43
TNIP1-215ENST00000522574 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
TNIP1-215ENST00000522574 UNC13AQ9UPW8 1703 aa17.7■□□□□ 0.42
TNIP1-215ENST00000522574 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
TNIP1-215ENST00000522574 DNAJC5Q9H3Z4 198 aa17.37■□□□□ 0.37
TNIP1-215ENST00000522574 CECR2Q9BXF3 1484 aa17.25■□□□□ 0.35
TNIP1-215ENST00000522574 EIF4G1Q04637 1599 aaKnown RBP17.16■□□□□ 0.34
TNIP1-215ENST00000522574 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
TNIP1-215ENST00000522574 MROH2BQ7Z745 1585 aa17.09■□□□□ 0.33
TNIP1-215ENST00000522574 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
TNIP1-215ENST00000522574 RSF1Q96T23 1441 aaPredicted RBP17.07■□□□□ 0.32
TNIP1-215ENST00000522574 CC2D2AQ9P2K1 1620 aa17.01■□□□□ 0.31
TNIP1-215ENST00000522574 ATAD2BQ9ULI0 1458 aa16.98■□□□□ 0.31
TNIP1-215ENST00000522574 NCAPD3P42695 1498 aa16.95■□□□□ 0.3
TNIP1-215ENST00000522574 SMARCA2P51531 1590 aa16.95■□□□□ 0.3
TNIP1-215ENST00000522574 PEG3Q9GZU2 1588 aa16.94■□□□□ 0.3
TNIP1-215ENST00000522574 SUPT5HO00267 1087 aaKnown RBP16.92■□□□□ 0.3
TNIP1-215ENST00000522574 WIZO95785 1651 aa16.88■□□□□ 0.29
TNIP1-215ENST00000522574 BAZ1BQ9UIG0 1483 aaKnown RBP16.83■□□□□ 0.29
TNIP1-215ENST00000522574 HMGXB3Q12766 1538 aa16.82■□□□□ 0.28
TNIP1-215ENST00000522574 TOP2AP11388 1531 aaKnown RBP16.74■□□□□ 0.27
TNIP1-215ENST00000522574 CUX2O14529 1486 aa16.62■□□□□ 0.25
TNIP1-215ENST00000522574 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
TNIP1-215ENST00000522574 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
TNIP1-215ENST00000522574 CFTRP13569 1480 aa16.43■□□□□ 0.22
TNIP1-215ENST00000522574 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
TNIP1-215ENST00000522574 NESP48681 1621 aa16.37■□□□□ 0.21
TNIP1-215ENST00000522574 PDS5BQ9NTI5 1447 aa16.34■□□□□ 0.21
TNIP1-215ENST00000522574 ERCC6Q03468 1493 aa16.31■□□□□ 0.2
TNIP1-215ENST00000522574 FANCD2Q9BXW9 1451 aa16.24■□□□□ 0.19
TNIP1-215ENST00000522574 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
TNIP1-215ENST00000522574 PRDM2Q13029 1718 aa16.15■□□□□ 0.18
TNIP1-215ENST00000522574 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
TNIP1-215ENST00000522574 KIF21AQ7Z4S6 1674 aa16.09■□□□□ 0.17
TNIP1-215ENST00000522574 MRC2Q9UBG0 1479 aa16.09■□□□□ 0.17
TNIP1-215ENST00000522574 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
TNIP1-215ENST00000522574 WRNQ14191 1432 aaPredicted RBP eCLIP16.07■□□□□ 0.16
TNIP1-215ENST00000522574 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
TNIP1-215ENST00000522574 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.16
TNIP1-215ENST00000522574 CUX1P39880 1505 aa16.01■□□□□ 0.15
TNIP1-215ENST00000522574 TOPBP1Q92547 1522 aa16.01■□□□□ 0.15
TNIP1-215ENST00000522574 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
TNIP1-215ENST00000522574 WDR62O43379 1518 aa15.99■□□□□ 0.15
TNIP1-215ENST00000522574 THOC2Q8NI27 1593 aaKnown RBP15.99■□□□□ 0.15
TNIP1-215ENST00000522574 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
TNIP1-215ENST00000522574 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
TNIP1-215ENST00000522574 SOGA1O94964 1423 aa15.9■□□□□ 0.14
TNIP1-215ENST00000522574 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
TNIP1-215ENST00000522574 FGD5Q6ZNL6 1462 aa15.9■□□□□ 0.14
TNIP1-215ENST00000522574 POLA1P09884 1462 aaPredicted RBP15.89■□□□□ 0.14
TNIP1-215ENST00000522574 IFT140Q96RY7 1462 aa15.85■□□□□ 0.13
TNIP1-215ENST00000522574 RAD54L2Q9Y4B4 1467 aa15.83■□□□□ 0.12
TNIP1-215ENST00000522574 ABCA10Q8WWZ4 1543 aa15.78■□□□□ 0.12
TNIP1-215ENST00000522574 TARBP1Q13395 1621 aaKnown RBP15.78■□□□□ 0.12
TNIP1-215ENST00000522574 TDRD9Q8NDG6 1382 aaKnown RBP15.76■□□□□ 0.11
TNIP1-215ENST00000522574 OSCARQ8IYS5 282 aa15.75■□□□□ 0.11
TNIP1-215ENST00000522574 KIF27Q86VH2 1401 aa15.73■□□□□ 0.11
TNIP1-215ENST00000522574 ZNF608Q9ULD9 1512 aaPredicted RBP15.72■□□□□ 0.11
TNIP1-215ENST00000522574 AQRO60306 1485 aaKnown RBP eCLIP15.72■□□□□ 0.111e-8■■■■□ 26
TNIP1-215ENST00000522574 GAPVD1Q14C86 1478 aa15.69■□□□□ 0.1
TNIP1-215ENST00000522574 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
TNIP1-215ENST00000522574 IGF1RP08069 1367 aa15.67■□□□□ 0.1
TNIP1-215ENST00000522574 EEA1Q15075 1411 aa15.66■□□□□ 0.1
TNIP1-215ENST00000522574 RUSC2Q8N2Y8 1516 aa15.65■□□□□ 0.1
TNIP1-215ENST00000522574 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
TNIP1-215ENST00000522574 GRIN2BQ13224 1484 aa15.64■□□□□ 0.09
TNIP1-215ENST00000522574 FAM9AQ8IZU1 332 aaPredicted RBP15.62■□□□□ 0.09
TNIP1-215ENST00000522574 ABCA5Q8WWZ7 1642 aa15.62■□□□□ 0.09
TNIP1-215ENST00000522574 EIF4G3O43432 1585 aaKnown RBP15.6■□□□□ 0.09
TNIP1-215ENST00000522574 ERICH3Q5RHP9 1530 aa15.6■□□□□ 0.09
TNIP1-215ENST00000522574 CARMIL1Q5VZK9 1371 aa15.56■□□□□ 0.08
TNIP1-215ENST00000522574 MAGI1Q96QZ7 1491 aaPredicted RBP15.55■□□□□ 0.08
TNIP1-215ENST00000522574 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
TNIP1-215ENST00000522574 CHMP7Q8WUX9 453 aaPredicted RBP15.53■□□□□ 0.08
TNIP1-215ENST00000522574 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
TNIP1-215ENST00000522574 RIMBP3CA6NJZ7 1639 aa15.51■□□□□ 0.07
TNIP1-215ENST00000522574 RIMBP3BA6NNM3 1639 aa15.51■□□□□ 0.07
TNIP1-215ENST00000522574 RIMBP3Q9UFD9 1639 aa15.51■□□□□ 0.07
TNIP1-215ENST00000522574 FBLN2P98095 1184 aa15.5■□□□□ 0.07
TNIP1-215ENST00000522574 PRXQ9BXM0 1461 aa15.5■□□□□ 0.07
TNIP1-215ENST00000522574 PBRM1Q86U86 1689 aa15.49■□□□□ 0.07
TNIP1-215ENST00000522574 SYNJ2O15056 1496 aa15.49■□□□□ 0.07
TNIP1-215ENST00000522574 RAPGEF2Q9Y4G8 1499 aa15.47■□□□□ 0.07
TNIP1-215ENST00000522574 CUL7Q14999 1698 aa15.46■□□□□ 0.07
TNIP1-215ENST00000522574 ADAMTS12P58397 1594 aa15.44■□□□□ 0.06
TNIP1-215ENST00000522574 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
TNIP1-215ENST00000522574 GRIN2AQ12879 1464 aa15.41■□□□□ 0.06
TNIP1-215ENST00000522574 UBTFP17480 764 aaKnown RBP15.38■□□□□ 0.05
TNIP1-215ENST00000522574 KIF21BO75037 1637 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms