RNA–Protein interactions for RNA: ENST00000522545.1

IKBKB-224, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 3

Gene IKBKB, Length 452 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-224ENST00000522545 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
IKBKB-224ENST00000522545 AEBP2Q6ZN18 517 aaPredicted RBP16.01■□□□□ 0.15
IKBKB-224ENST00000522545 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
IKBKB-224ENST00000522545 CCDC180Q9P1Z9 1646 aa14.34□□□□□ -0.11
IKBKB-224ENST00000522545 ABCC9O60706 1549 aa13.66□□□□□ -0.22
IKBKB-224ENST00000522545 SENP3Q9H4L4 574 aaPredicted RBP13.63□□□□□ -0.23
IKBKB-224ENST00000522545 PHF23Q9BUL5 403 aaPredicted RBP13.58□□□□□ -0.24
IKBKB-224ENST00000522545 ZCCHC6Q5VYS8 1495 aaKnown RBP13.52□□□□□ -0.25
IKBKB-224ENST00000522545 DCAF1Q9Y4B6 1507 aa13.48□□□□□ -0.25
IKBKB-224ENST00000522545 MYO15BQ96JP2 1530 aa13.46□□□□□ -0.25
IKBKB-224ENST00000522545 NACADO15069 1562 aa13.42□□□□□ -0.26
IKBKB-224ENST00000522545 DCAF8L2P0C7V8 631 aa13.38□□□□□ -0.27
IKBKB-224ENST00000522545 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
IKBKB-224ENST00000522545 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
IKBKB-224ENST00000522545 UNC13AQ9UPW8 1703 aa12.99□□□□□ -0.33
IKBKB-224ENST00000522545 SHROOM4Q9ULL8 1493 aa12.91□□□□□ -0.34
IKBKB-224ENST00000522545 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
IKBKB-224ENST00000522545 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
IKBKB-224ENST00000522545 FOXD1Q16676 465 aa12.66□□□□□ -0.38
IKBKB-224ENST00000522545 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
IKBKB-224ENST00000522545 EIF4G1Q04637 1599 aaKnown RBP12.54□□□□□ -0.4
IKBKB-224ENST00000522545 PLPPR3Q6T4P5 718 aa12.5□□□□□ -0.41
IKBKB-224ENST00000522545 SMARCA4P51532 1647 aa12.5□□□□□ -0.41
IKBKB-224ENST00000522545 CECR2Q9BXF3 1484 aa12.49□□□□□ -0.41
IKBKB-224ENST00000522545 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
IKBKB-224ENST00000522545 MROH2BQ7Z745 1585 aa12.43□□□□□ -0.42
IKBKB-224ENST00000522545 PEG3Q9GZU2 1588 aa12.41□□□□□ -0.42
IKBKB-224ENST00000522545 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
IKBKB-224ENST00000522545 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
IKBKB-224ENST00000522545 NCAPD3P42695 1498 aa12.35□□□□□ -0.43
IKBKB-224ENST00000522545 ATAD2BQ9ULI0 1458 aa12.35□□□□□ -0.43
IKBKB-224ENST00000522545 HMGXB3Q12766 1538 aa12.32□□□□□ -0.44
IKBKB-224ENST00000522545 POTEDQ86YR6 584 aa12.31□□□□□ -0.44
IKBKB-224ENST00000522545 WIZO95785 1651 aa12.31□□□□□ -0.44
IKBKB-224ENST00000522545 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
IKBKB-224ENST00000522545 SUPT5HO00267 1087 aaKnown RBP12.25□□□□□ -0.45
IKBKB-224ENST00000522545 TOP2AP11388 1531 aaKnown RBP12.24□□□□□ -0.45
IKBKB-224ENST00000522545 DNAJC5BQ9UF47 199 aa12.24□□□□□ -0.45
IKBKB-224ENST00000522545 CCDC88BA6NC98 1476 aa12.07□□□□□ -0.48
IKBKB-224ENST00000522545 PPP6R1Q9UPN7 881 aa12.04□□□□□ -0.48
IKBKB-224ENST00000522545 ADRA2BP18089 450 aa12.02□□□□□ -0.49
IKBKB-224ENST00000522545 LAMC3Q9Y6N6 1575 aa12.01□□□□□ -0.49
IKBKB-224ENST00000522545 CADPSQ9ULU8 1353 aa12□□□□□ -0.49
IKBKB-224ENST00000522545 CFTRP13569 1480 aa11.98□□□□□ -0.49
IKBKB-224ENST00000522545 PRDM2Q13029 1718 aa11.94□□□□□ -0.5
IKBKB-224ENST00000522545 PDS5BQ9NTI5 1447 aa11.93□□□□□ -0.5
IKBKB-224ENST00000522545 PIAS4Q8N2W9 510 aaPredicted RBP11.91□□□□□ -0.5
IKBKB-224ENST00000522545 NESP48681 1621 aa11.87□□□□□ -0.51
IKBKB-224ENST00000522545 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
IKBKB-224ENST00000522545 ERCC6Q03468 1493 aa11.83□□□□□ -0.52
IKBKB-224ENST00000522545 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
IKBKB-224ENST00000522545 ABCC8Q09428 1581 aa11.8□□□□□ -0.52
IKBKB-224ENST00000522545 KIF21AQ7Z4S6 1674 aa11.78□□□□□ -0.52
IKBKB-224ENST00000522545 MSH5O43196 834 aa11.77□□□□□ -0.53
IKBKB-224ENST00000522545 MRC2Q9UBG0 1479 aa11.74□□□□□ -0.53
IKBKB-224ENST00000522545 WRNQ14191 1432 aaPredicted RBP eCLIP11.71□□□□□ -0.53
IKBKB-224ENST00000522545 DNMBPQ6XZF7 1577 aa11.71□□□□□ -0.54
IKBKB-224ENST00000522545 WDR62O43379 1518 aa11.7□□□□□ -0.54
IKBKB-224ENST00000522545 THOC2Q8NI27 1593 aaKnown RBP11.68□□□□□ -0.54
IKBKB-224ENST00000522545 TOP2BQ02880 1626 aa11.68□□□□□ -0.54
IKBKB-224ENST00000522545 BIVM-ERCC5R4GMW8 1640 aa11.67□□□□□ -0.54
IKBKB-224ENST00000522545 URB2Q14146 1524 aaKnown RBP11.66□□□□□ -0.54
IKBKB-224ENST00000522545 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
IKBKB-224ENST00000522545 CUX1P39880 1505 aa11.65□□□□□ -0.54
IKBKB-224ENST00000522545 CUX2O14529 1486 aa11.63□□□□□ -0.55
IKBKB-224ENST00000522545 TRIM41Q8WV44 630 aa11.63□□□□□ -0.55
IKBKB-224ENST00000522545 SYNJ1O43426 1573 aa11.62□□□□□ -0.55
IKBKB-224ENST00000522545 POLA1P09884 1462 aaPredicted RBP11.58□□□□□ -0.56
IKBKB-224ENST00000522545 FGD5Q6ZNL6 1462 aa11.58□□□□□ -0.56
IKBKB-224ENST00000522545 IFT140Q96RY7 1462 aa11.57□□□□□ -0.56
IKBKB-224ENST00000522545 SOGA1O94964 1423 aa11.57□□□□□ -0.56
IKBKB-224ENST00000522545 WDR97A6NE52 1622 aa11.56□□□□□ -0.56
IKBKB-224ENST00000522545 TARBP1Q13395 1621 aaKnown RBP11.53□□□□□ -0.56
IKBKB-224ENST00000522545 ABCA10Q8WWZ4 1543 aa11.52□□□□□ -0.57
IKBKB-224ENST00000522545 KIF27Q86VH2 1401 aa11.49□□□□□ -0.57
IKBKB-224ENST00000522545 EEA1Q15075 1411 aa11.48□□□□□ -0.57
IKBKB-224ENST00000522545 RAD54L2Q9Y4B4 1467 aa11.48□□□□□ -0.57
IKBKB-224ENST00000522545 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
IKBKB-224ENST00000522545 ABCA5Q8WWZ7 1642 aa11.44□□□□□ -0.58
IKBKB-224ENST00000522545 TDRD9Q8NDG6 1382 aaKnown RBP11.42□□□□□ -0.58
IKBKB-224ENST00000522545 EIF4G3O43432 1585 aaKnown RBP11.42□□□□□ -0.58
IKBKB-224ENST00000522545 ERICH3Q5RHP9 1530 aa11.42□□□□□ -0.58
IKBKB-224ENST00000522545 GRIN2BQ13224 1484 aa11.42□□□□□ -0.58
IKBKB-224ENST00000522545 ZNF608Q9ULD9 1512 aaPredicted RBP11.4□□□□□ -0.58
IKBKB-224ENST00000522545 AQRO60306 1485 aaKnown RBP eCLIP11.39□□□□□ -0.59
IKBKB-224ENST00000522545 PBRM1Q86U86 1689 aa11.39□□□□□ -0.59
IKBKB-224ENST00000522545 MAGI1Q96QZ7 1491 aaPredicted RBP11.38□□□□□ -0.59
IKBKB-224ENST00000522545 CUL7Q14999 1698 aa11.38□□□□□ -0.59
IKBKB-224ENST00000522545 CSRNP3Q8WYN3 585 aa11.36□□□□□ -0.59
IKBKB-224ENST00000522545 IGF1RP08069 1367 aa11.36□□□□□ -0.59
IKBKB-224ENST00000522545 FHAD1B1AJZ9 1412 aa11.34□□□□□ -0.59
IKBKB-224ENST00000522545 RUSC2Q8N2Y8 1516 aa11.32□□□□□ -0.6
IKBKB-224ENST00000522545 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
IKBKB-224ENST00000522545 SNAPC4Q5SXM2 1469 aa11.32□□□□□ -0.6
IKBKB-224ENST00000522545 CARMIL1Q5VZK9 1371 aa11.31□□□□□ -0.6
IKBKB-224ENST00000522545 ADAMTS12P58397 1594 aa11.3□□□□□ -0.6
IKBKB-224ENST00000522545 CHMP7Q8WUX9 453 aaPredicted RBP11.29□□□□□ -0.6
IKBKB-224ENST00000522545 PRXQ9BXM0 1461 aa11.29□□□□□ -0.6
IKBKB-224ENST00000522545 RAPGEF2Q9Y4G8 1499 aa11.29□□□□□ -0.6
IKBKB-224ENST00000522545 KIF21BO75037 1637 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms