RNA–Protein interactions for RNA: ENST00000522316.1

RUNX1T1-241, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-241ENST00000522316 NISCHQ9Y2I1 1504 aa46.41■■■■■ 5.02
RUNX1T1-241ENST00000522316 CCDC180Q9P1Z9 1646 aa41.04■■■■■ 4.16
RUNX1T1-241ENST00000522316 ABCC9O60706 1549 aa39.83■■■■□ 3.97
RUNX1T1-241ENST00000522316 ZCCHC6Q5VYS8 1495 aaKnown RBP38.75■■■■□ 3.79
RUNX1T1-241ENST00000522316 DCAF8L2P0C7V8 631 aa38.54■■■■□ 3.76
RUNX1T1-241ENST00000522316 NACADO15069 1562 aa38.52■■■■□ 3.76
RUNX1T1-241ENST00000522316 RB1CC1Q8TDY2 1594 aa38.44■■■■□ 3.74
RUNX1T1-241ENST00000522316 MYO15BQ96JP2 1530 aa38.44■■■■□ 3.74
RUNX1T1-241ENST00000522316 DCAF1Q9Y4B6 1507 aa38.43■■■■□ 3.74
RUNX1T1-241ENST00000522316 UNC13AQ9UPW8 1703 aa37.56■■■■□ 3.6
RUNX1T1-241ENST00000522316 SCRIBQ14160 1630 aa37.5■■■■□ 3.59
RUNX1T1-241ENST00000522316 BICRAQ9NZM4 1560 aa37.34■■■■□ 3.57
RUNX1T1-241ENST00000522316 PABPN1Q86U42 306 aaKnown RBP eCLIP37.29■■■■□ 3.56
RUNX1T1-241ENST00000522316 SHROOM4Q9ULL8 1493 aa36.94■■■■□ 3.5
RUNX1T1-241ENST00000522316 EIF4G1Q04637 1599 aaKnown RBP36.28■■■■□ 3.4
RUNX1T1-241ENST00000522316 DNAJC5BQ9UF47 199 aa36.27■■■■□ 3.4
RUNX1T1-241ENST00000522316 CECR2Q9BXF3 1484 aa36.13■■■■□ 3.37
RUNX1T1-241ENST00000522316 CC2D2AQ9P2K1 1620 aa36.03■■■■□ 3.36
RUNX1T1-241ENST00000522316 BAZ1AQ9NRL2 1556 aaPredicted RBP35.92■■■■□ 3.34
RUNX1T1-241ENST00000522316 SMARCA4P51532 1647 aa35.91■■■■□ 3.34
RUNX1T1-241ENST00000522316 MROH2BQ7Z745 1585 aa35.79■■■■□ 3.32
RUNX1T1-241ENST00000522316 ATAD2BQ9ULI0 1458 aa35.65■■■■□ 3.3
RUNX1T1-241ENST00000522316 SMARCA2P51531 1590 aa35.58■■■■□ 3.29
RUNX1T1-241ENST00000522316 PEG3Q9GZU2 1588 aa35.58■■■■□ 3.29
RUNX1T1-241ENST00000522316 NCAPD3P42695 1498 aa35.57■■■■□ 3.28
RUNX1T1-241ENST00000522316 RSF1Q96T23 1441 aaPredicted RBP35.53■■■■□ 3.28
RUNX1T1-241ENST00000522316 HMGXB3Q12766 1538 aa35.42■■■■□ 3.26
RUNX1T1-241ENST00000522316 WIZO95785 1651 aa35.38■■■■□ 3.25
RUNX1T1-241ENST00000522316 BAZ1BQ9UIG0 1483 aaKnown RBP35.35■■■■□ 3.25
RUNX1T1-241ENST00000522316 TOP2AP11388 1531 aaKnown RBP35.05■■■■□ 3.2
RUNX1T1-241ENST00000522316 SUPT5HO00267 1087 aaKnown RBP34.85■■■■□ 3.17
RUNX1T1-241ENST00000522316 CCDC88BA6NC98 1476 aa34.65■■■■□ 3.14
RUNX1T1-241ENST00000522316 NESP48681 1621 aa34.59■■■■□ 3.13
RUNX1T1-241ENST00000522316 CADPSQ9ULU8 1353 aa34.54■■■■□ 3.12
RUNX1T1-241ENST00000522316 LAMC3Q9Y6N6 1575 aa34.53■■■■□ 3.12
RUNX1T1-241ENST00000522316 CFTRP13569 1480 aa34.43■■■■□ 3.1
RUNX1T1-241ENST00000522316 PDS5BQ9NTI5 1447 aa34.29■■■■□ 3.08
RUNX1T1-241ENST00000522316 ERCC6Q03468 1493 aa34.27■■■■□ 3.08
RUNX1T1-241ENST00000522316 FANCD2Q9BXW9 1451 aa34.14■■■■□ 3.06
RUNX1T1-241ENST00000522316 KIF21AQ7Z4S6 1674 aa34.14■■■■□ 3.06
RUNX1T1-241ENST00000522316 PRDM2Q13029 1718 aa34.1■■■■□ 3.05
RUNX1T1-241ENST00000522316 CEP164Q9UPV0 1460 aa34.04■■■■□ 3.04
RUNX1T1-241ENST00000522316 THOC2Q8NI27 1593 aaKnown RBP33.98■■■■□ 3.03
RUNX1T1-241ENST00000522316 MRC2Q9UBG0 1479 aa33.93■■■■□ 3.02
RUNX1T1-241ENST00000522316 WDR62O43379 1518 aa33.82■■■■□ 3
RUNX1T1-241ENST00000522316 URB2Q14146 1524 aaKnown RBP33.8■■■■□ 3
RUNX1T1-241ENST00000522316 CUX2O14529 1486 aa33.79■■■■□ 3
RUNX1T1-241ENST00000522316 TOPBP1Q92547 1522 aa33.64■■■□□ 2.98
RUNX1T1-241ENST00000522316 ABCC8Q09428 1581 aa33.63■■■□□ 2.97
RUNX1T1-241ENST00000522316 DNMBPQ6XZF7 1577 aa33.62■■■□□ 2.97
RUNX1T1-241ENST00000522316 CUX1P39880 1505 aa33.55■■■□□ 2.96
RUNX1T1-241ENST00000522316 WRNQ14191 1432 aaPredicted RBP eCLIP33.45■■■□□ 2.94
RUNX1T1-241ENST00000522316 POLA1P09884 1462 aaPredicted RBP33.39■■■□□ 2.94
RUNX1T1-241ENST00000522316 SYNJ1O43426 1573 aa33.36■■■□□ 2.93
RUNX1T1-241ENST00000522316 FGD5Q6ZNL6 1462 aa33.36■■■□□ 2.93
RUNX1T1-241ENST00000522316 IFT140Q96RY7 1462 aa33.33■■■□□ 2.93
RUNX1T1-241ENST00000522316 TOP2BQ02880 1626 aa33.33■■■□□ 2.93
RUNX1T1-241ENST00000522316 BIVM-ERCC5R4GMW8 1640 aa33.31■■■□□ 2.92
RUNX1T1-241ENST00000522316 RAD54L2Q9Y4B4 1467 aa33.25■■■□□ 2.91
RUNX1T1-241ENST00000522316 TARBP1Q13395 1621 aaKnown RBP33.24■■■□□ 2.91
RUNX1T1-241ENST00000522316 SOGA1O94964 1423 aa33.24■■■□□ 2.91
RUNX1T1-241ENST00000522316 ZNF608Q9ULD9 1512 aaPredicted RBP33.18■■■□□ 2.9
RUNX1T1-241ENST00000522316 ABCA10Q8WWZ4 1543 aa33.06■■■□□ 2.88
RUNX1T1-241ENST00000522316 WDR97A6NE52 1622 aa33.05■■■□□ 2.88
RUNX1T1-241ENST00000522316 EIF4G3O43432 1585 aaKnown RBP33.02■■■□□ 2.88
RUNX1T1-241ENST00000522316 AQRO60306 1485 aaKnown RBP eCLIP33.02■■■□□ 2.88
RUNX1T1-241ENST00000522316 TDRD9Q8NDG6 1382 aaKnown RBP33.02■■■□□ 2.88
RUNX1T1-241ENST00000522316 TRIM41Q8WV44 630 aa32.89■■■□□ 2.86
RUNX1T1-241ENST00000522316 ABCA5Q8WWZ7 1642 aa32.88■■■□□ 2.85
RUNX1T1-241ENST00000522316 GAPVD1Q14C86 1478 aa32.86■■■□□ 2.85
RUNX1T1-241ENST00000522316 GRIN2BQ13224 1484 aa32.81■■■□□ 2.84
RUNX1T1-241ENST00000522316 CHIC1Q5VXU3 224 aa32.79■■■□□ 2.84
RUNX1T1-241ENST00000522316 PBRM1Q86U86 1689 aa32.72■■■□□ 2.83
RUNX1T1-241ENST00000522316 SNAPC4Q5SXM2 1469 aa32.72■■■□□ 2.83
RUNX1T1-241ENST00000522316 KIF27Q86VH2 1401 aa32.71■■■□□ 2.83
RUNX1T1-241ENST00000522316 MAGI1Q96QZ7 1491 aaPredicted RBP32.68■■■□□ 2.82
RUNX1T1-241ENST00000522316 ERICH3Q5RHP9 1530 aa32.66■■■□□ 2.82
RUNX1T1-241ENST00000522316 IGF1RP08069 1367 aa32.58■■■□□ 2.81
RUNX1T1-241ENST00000522316 RUSC2Q8N2Y8 1516 aa32.57■■■□□ 2.8
RUNX1T1-241ENST00000522316 SYNJ2O15056 1496 aa32.55■■■□□ 2.8
RUNX1T1-241ENST00000522316 ADAMTS12P58397 1594 aa32.54■■■□□ 2.8
RUNX1T1-241ENST00000522316 FHAD1B1AJZ9 1412 aa32.51■■■□□ 2.79
RUNX1T1-241ENST00000522316 CHD1O14646 1710 aa32.49■■■□□ 2.79
RUNX1T1-241ENST00000522316 FBLN2P98095 1184 aa32.49■■■□□ 2.79
RUNX1T1-241ENST00000522316 CHMP7Q8WUX9 453 aaPredicted RBP32.48■■■□□ 2.79
RUNX1T1-241ENST00000522316 OSCARQ8IYS5 282 aa32.45■■■□□ 2.79
RUNX1T1-241ENST00000522316 DNAJC5Q9H3Z4 198 aa32.41■■■□□ 2.78
RUNX1T1-241ENST00000522316 GRIN2AQ12879 1464 aa32.4■■■□□ 2.78
RUNX1T1-241ENST00000522316 CUL7Q14999 1698 aa32.4■■■□□ 2.78
RUNX1T1-241ENST00000522316 CARMIL1Q5VZK9 1371 aa32.36■■■□□ 2.77
RUNX1T1-241ENST00000522316 EEA1Q15075 1411 aa32.34■■■□□ 2.77
RUNX1T1-241ENST00000522316 NUP160Q12769 1436 aa32.26■■■□□ 2.76
RUNX1T1-241ENST00000522316 CSRNP3Q8WYN3 585 aa32.25■■■□□ 2.75
RUNX1T1-241ENST00000522316 PRXQ9BXM0 1461 aa32.23■■■□□ 2.75
RUNX1T1-241ENST00000522316 CLASP1Q7Z460 1538 aa32.22■■■□□ 2.75
RUNX1T1-241ENST00000522316 CEP170Q5SW79 1584 aa32.22■■■□□ 2.75
RUNX1T1-241ENST00000522316 FAM9AQ8IZU1 332 aaPredicted RBP32.2■■■□□ 2.75
RUNX1T1-241ENST00000522316 RAPGEF2Q9Y4G8 1499 aa32.2■■■□□ 2.75
RUNX1T1-241ENST00000522316 KIAA0586Q9BVV6 1533 aa32.02■■■□□ 2.72
RUNX1T1-241ENST00000522316 KIF21BO75037 1637 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms