RNA–Protein interactions for RNA: ENST00000521729.5

CNOT8-219, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 2

Gene CNOT8, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-219ENST00000521729 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
CNOT8-219ENST00000521729 CCDC180Q9P1Z9 1646 aa29.94■■■□□ 2.38
CNOT8-219ENST00000521729 ABCC9O60706 1549 aa28.93■■■□□ 2.22
CNOT8-219ENST00000521729 ZCCHC6Q5VYS8 1495 aaKnown RBP28.23■■■□□ 2.11
CNOT8-219ENST00000521729 DCAF8L2P0C7V8 631 aa28.11■■■□□ 2.09
CNOT8-219ENST00000521729 NACADO15069 1562 aa28.09■■■□□ 2.09
CNOT8-219ENST00000521729 MYO15BQ96JP2 1530 aa28.07■■■□□ 2.08
CNOT8-219ENST00000521729 DCAF1Q9Y4B6 1507 aa28.05■■■□□ 2.08
CNOT8-219ENST00000521729 RB1CC1Q8TDY2 1594 aa28.02■■■□□ 2.08
CNOT8-219ENST00000521729 UNC13AQ9UPW8 1703 aa27.4■■□□□ 1.98
CNOT8-219ENST00000521729 SCRIBQ14160 1630 aa27.27■■□□□ 1.96
CNOT8-219ENST00000521729 BICRAQ9NZM4 1560 aa27.16■■□□□ 1.94
CNOT8-219ENST00000521729 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.93
CNOT8-219ENST00000521729 SHROOM4Q9ULL8 1493 aa26.92■■□□□ 1.9
CNOT8-219ENST00000521729 EIF4G1Q04637 1599 aaKnown RBP26.4■■□□□ 1.82
CNOT8-219ENST00000521729 DNAJC5BQ9UF47 199 aa26.32■■□□□ 1.8
CNOT8-219ENST00000521729 CECR2Q9BXF3 1484 aa26.3■■□□□ 1.8
CNOT8-219ENST00000521729 CC2D2AQ9P2K1 1620 aa26.21■■□□□ 1.79
CNOT8-219ENST00000521729 BAZ1AQ9NRL2 1556 aaPredicted RBP26.2■■□□□ 1.78
CNOT8-219ENST00000521729 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
CNOT8-219ENST00000521729 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
CNOT8-219ENST00000521729 ATAD2BQ9ULI0 1458 aa25.96■■□□□ 1.75
CNOT8-219ENST00000521729 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.74
CNOT8-219ENST00000521729 SMARCA2P51531 1590 aa25.94■■□□□ 1.74
CNOT8-219ENST00000521729 NCAPD3P42695 1498 aa25.93■■□□□ 1.74
CNOT8-219ENST00000521729 RSF1Q96T23 1441 aaPredicted RBP25.9■■□□□ 1.74
CNOT8-219ENST00000521729 WIZO95785 1651 aa25.8■■□□□ 1.72
CNOT8-219ENST00000521729 HMGXB3Q12766 1538 aa25.79■■□□□ 1.72
CNOT8-219ENST00000521729 BAZ1BQ9UIG0 1483 aaKnown RBP25.73■■□□□ 1.71
CNOT8-219ENST00000521729 TOP2AP11388 1531 aaKnown RBP25.54■■□□□ 1.68
CNOT8-219ENST00000521729 SUPT5HO00267 1087 aaKnown RBP25.46■■□□□ 1.67
CNOT8-219ENST00000521729 CCDC88BA6NC98 1476 aa25.27■■□□□ 1.64
CNOT8-219ENST00000521729 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
CNOT8-219ENST00000521729 LAMC3Q9Y6N6 1575 aa25.16■■□□□ 1.62
CNOT8-219ENST00000521729 NESP48681 1621 aa25.13■■□□□ 1.61
CNOT8-219ENST00000521729 CFTRP13569 1480 aa25.09■■□□□ 1.61
CNOT8-219ENST00000521729 PDS5BQ9NTI5 1447 aa24.98■■□□□ 1.59
CNOT8-219ENST00000521729 PRDM2Q13029 1718 aa24.93■■□□□ 1.58
CNOT8-219ENST00000521729 ERCC6Q03468 1493 aa24.89■■□□□ 1.57
CNOT8-219ENST00000521729 KIF21AQ7Z4S6 1674 aa24.86■■□□□ 1.57
CNOT8-219ENST00000521729 FANCD2Q9BXW9 1451 aa24.84■■□□□ 1.57
CNOT8-219ENST00000521729 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
CNOT8-219ENST00000521729 THOC2Q8NI27 1593 aaKnown RBP24.68■■□□□ 1.54
CNOT8-219ENST00000521729 MRC2Q9UBG0 1479 aa24.68■■□□□ 1.54
CNOT8-219ENST00000521729 WDR62O43379 1518 aa24.59■■□□□ 1.53
CNOT8-219ENST00000521729 URB2Q14146 1524 aaKnown RBP24.58■■□□□ 1.53
CNOT8-219ENST00000521729 ABCC8Q09428 1581 aa24.57■■□□□ 1.52
CNOT8-219ENST00000521729 CUX2O14529 1486 aa24.56■■□□□ 1.52
CNOT8-219ENST00000521729 TOPBP1Q92547 1522 aa24.5■■□□□ 1.51
CNOT8-219ENST00000521729 DNMBPQ6XZF7 1577 aa24.49■■□□□ 1.51
CNOT8-219ENST00000521729 CUX1P39880 1505 aa24.42■■□□□ 1.5
CNOT8-219ENST00000521729 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
CNOT8-219ENST00000521729 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
CNOT8-219ENST00000521729 BIVM-ERCC5R4GMW8 1640 aa24.32■■□□□ 1.48
CNOT8-219ENST00000521729 SYNJ1O43426 1573 aa24.3■■□□□ 1.48
CNOT8-219ENST00000521729 POLA1P09884 1462 aaPredicted RBP24.3■■□□□ 1.48
CNOT8-219ENST00000521729 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
CNOT8-219ENST00000521729 IFT140Q96RY7 1462 aa24.26■■□□□ 1.47
CNOT8-219ENST00000521729 SOGA1O94964 1423 aa24.24■■□□□ 1.47
CNOT8-219ENST00000521729 TARBP1Q13395 1621 aaKnown RBP24.22■■□□□ 1.47
CNOT8-219ENST00000521729 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
CNOT8-219ENST00000521729 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
CNOT8-219ENST00000521729 ABCA10Q8WWZ4 1543 aa24.1■■□□□ 1.45
CNOT8-219ENST00000521729 WDR97A6NE52 1622 aa24.08■■□□□ 1.45
CNOT8-219ENST00000521729 TRIM41Q8WV44 630 aa24.07■■□□□ 1.44
CNOT8-219ENST00000521729 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
CNOT8-219ENST00000521729 AQRO60306 1485 aaKnown RBP eCLIP24.03■■□□□ 1.444e-10■■■■■ 49.3
CNOT8-219ENST00000521729 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
CNOT8-219ENST00000521729 EIF4G3O43432 1585 aaKnown RBP24■■□□□ 1.43
CNOT8-219ENST00000521729 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.42
CNOT8-219ENST00000521729 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
CNOT8-219ENST00000521729 GRIN2BQ13224 1484 aa23.9■■□□□ 1.42
CNOT8-219ENST00000521729 KIF27Q86VH2 1401 aa23.87■■□□□ 1.41
CNOT8-219ENST00000521729 PBRM1Q86U86 1689 aa23.86■■□□□ 1.41
CNOT8-219ENST00000521729 ERICH3Q5RHP9 1530 aa23.81■■□□□ 1.4
CNOT8-219ENST00000521729 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
CNOT8-219ENST00000521729 SNAPC4Q5SXM2 1469 aa23.78■■□□□ 1.4
CNOT8-219ENST00000521729 IGF1RP08069 1367 aa23.78■■□□□ 1.4
CNOT8-219ENST00000521729 RUSC2Q8N2Y8 1516 aa23.75■■□□□ 1.39
CNOT8-219ENST00000521729 SYNJ2O15056 1496 aa23.7■■□□□ 1.38
CNOT8-219ENST00000521729 FHAD1B1AJZ9 1412 aa23.69■■□□□ 1.38
CNOT8-219ENST00000521729 CHMP7Q8WUX9 453 aaPredicted RBP23.68■■□□□ 1.38
CNOT8-219ENST00000521729 ADAMTS12P58397 1594 aa23.67■■□□□ 1.38
CNOT8-219ENST00000521729 CHD1O14646 1710 aa23.67■■□□□ 1.38
CNOT8-219ENST00000521729 EEA1Q15075 1411 aa23.66■■□□□ 1.38
CNOT8-219ENST00000521729 CUL7Q14999 1698 aa23.65■■□□□ 1.38
CNOT8-219ENST00000521729 FBLN2P98095 1184 aa23.65■■□□□ 1.38
CNOT8-219ENST00000521729 OSCARQ8IYS5 282 aa23.65■■□□□ 1.38
CNOT8-219ENST00000521729 CARMIL1Q5VZK9 1371 aa23.62■■□□□ 1.37
CNOT8-219ENST00000521729 CSRNP3Q8WYN3 585 aa23.6■■□□□ 1.37
CNOT8-219ENST00000521729 GRIN2AQ12879 1464 aa23.58■■□□□ 1.37
CNOT8-219ENST00000521729 PRXQ9BXM0 1461 aa23.51■■□□□ 1.35
CNOT8-219ENST00000521729 FAM9AQ8IZU1 332 aaPredicted RBP23.51■■□□□ 1.35
CNOT8-219ENST00000521729 RAPGEF2Q9Y4G8 1499 aa23.5■■□□□ 1.35
CNOT8-219ENST00000521729 NUP160Q12769 1436 aa23.48■■□□□ 1.35
CNOT8-219ENST00000521729 DNAJC5Q9H3Z4 198 aa23.47■■□□□ 1.35
CNOT8-219ENST00000521729 CEP170Q5SW79 1584 aa23.44■■□□□ 1.34
CNOT8-219ENST00000521729 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
CNOT8-219ENST00000521729 KIF21BO75037 1637 aa23.37■■□□□ 1.33
CNOT8-219ENST00000521729 KIAA0586Q9BVV6 1533 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms