RNA–Protein interactions for RNA: ENST00000520556.5

RUNX1T1-225, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-225ENST00000520556 NISCHQ9Y2I1 1504 aa20.61■□□□□ 0.89
RUNX1T1-225ENST00000520556 ABCC9O60706 1549 aa20.07■□□□□ 0.8
RUNX1T1-225ENST00000520556 DNAJC5BQ9UF47 199 aa19.73■□□□□ 0.75
RUNX1T1-225ENST00000520556 CCDC180Q9P1Z9 1646 aa18.98■□□□□ 0.63
RUNX1T1-225ENST00000520556 DNAJC5Q9H3Z4 198 aa18.89■□□□□ 0.61
RUNX1T1-225ENST00000520556 RB1CC1Q8TDY2 1594 aa18.6■□□□□ 0.57
RUNX1T1-225ENST00000520556 PABPN1Q86U42 306 aaKnown RBP eCLIP18.49■□□□□ 0.55
RUNX1T1-225ENST00000520556 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
RUNX1T1-225ENST00000520556 NACADO15069 1562 aa18.18■□□□□ 0.5
RUNX1T1-225ENST00000520556 CECR2Q9BXF3 1484 aa18.18■□□□□ 0.5
RUNX1T1-225ENST00000520556 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.49
RUNX1T1-225ENST00000520556 CC2D2AQ9P2K1 1620 aa18.06■□□□□ 0.48
RUNX1T1-225ENST00000520556 DCAF8L2P0C7V8 631 aa17.9■□□□□ 0.46
RUNX1T1-225ENST00000520556 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
RUNX1T1-225ENST00000520556 CUX2O14529 1486 aa17.71■□□□□ 0.43
RUNX1T1-225ENST00000520556 SHROOM4Q9ULL8 1493 aa17.7■□□□□ 0.42
RUNX1T1-225ENST00000520556 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
RUNX1T1-225ENST00000520556 MYO15BQ96JP2 1530 aa17.53■□□□□ 0.4
RUNX1T1-225ENST00000520556 ERCC6Q03468 1493 aa17.42■□□□□ 0.38
RUNX1T1-225ENST00000520556 SCRIBQ14160 1630 aa17.28■□□□□ 0.36
RUNX1T1-225ENST00000520556 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
RUNX1T1-225ENST00000520556 AEBP2Q6ZN18 517 aaPredicted RBP16.93■□□□□ 0.3
RUNX1T1-225ENST00000520556 NESP48681 1621 aa16.92■□□□□ 0.3
RUNX1T1-225ENST00000520556 DCAF1Q9Y4B6 1507 aa16.92■□□□□ 0.3
RUNX1T1-225ENST00000520556 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
RUNX1T1-225ENST00000520556 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
RUNX1T1-225ENST00000520556 NCAPD3P42695 1498 aa16.78■□□□□ 0.28
RUNX1T1-225ENST00000520556 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.27
RUNX1T1-225ENST00000520556 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
RUNX1T1-225ENST00000520556 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
RUNX1T1-225ENST00000520556 RIMBP3CA6NJZ7 1639 aa16.66■□□□□ 0.26
RUNX1T1-225ENST00000520556 RIMBP3BA6NNM3 1639 aa16.66■□□□□ 0.26
RUNX1T1-225ENST00000520556 RIMBP3Q9UFD9 1639 aa16.66■□□□□ 0.26
RUNX1T1-225ENST00000520556 LAMC3Q9Y6N6 1575 aa16.61■□□□□ 0.25
RUNX1T1-225ENST00000520556 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
RUNX1T1-225ENST00000520556 ATAD2BQ9ULI0 1458 aa16.6■□□□□ 0.25
RUNX1T1-225ENST00000520556 HMGXB3Q12766 1538 aa16.59■□□□□ 0.25
RUNX1T1-225ENST00000520556 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
RUNX1T1-225ENST00000520556 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
RUNX1T1-225ENST00000520556 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
RUNX1T1-225ENST00000520556 WDR62O43379 1518 aa16.47■□□□□ 0.23
RUNX1T1-225ENST00000520556 CYB5RLQ6IPT4 315 aa16.41■□□□□ 0.22
RUNX1T1-225ENST00000520556 BAZ1BQ9UIG0 1483 aaKnown RBP16.41■□□□□ 0.22
RUNX1T1-225ENST00000520556 ILDR1Q86SU0 546 aaPredicted RBP16.39■□□□□ 0.21
RUNX1T1-225ENST00000520556 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
RUNX1T1-225ENST00000520556 ARAP1Q96P48 1450 aa16.24■□□□□ 0.19
RUNX1T1-225ENST00000520556 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
RUNX1T1-225ENST00000520556 CEP164Q9UPV0 1460 aa16.21■□□□□ 0.19
RUNX1T1-225ENST00000520556 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.17
RUNX1T1-225ENST00000520556 FANCD2Q9BXW9 1451 aa16.09■□□□□ 0.17
RUNX1T1-225ENST00000520556 URB2Q14146 1524 aaKnown RBP16.02■□□□□ 0.15
RUNX1T1-225ENST00000520556 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
RUNX1T1-225ENST00000520556 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
RUNX1T1-225ENST00000520556 CHD1O14646 1710 aa15.98■□□□□ 0.15
RUNX1T1-225ENST00000520556 IFT140Q96RY7 1462 aa15.9■□□□□ 0.14
RUNX1T1-225ENST00000520556 EIF4G3O43432 1585 aaKnown RBP15.89■□□□□ 0.13
RUNX1T1-225ENST00000520556 MROH2BQ7Z745 1585 aa15.88■□□□□ 0.13
RUNX1T1-225ENST00000520556 FBLN2P98095 1184 aa15.86■□□□□ 0.13
RUNX1T1-225ENST00000520556 CFTRP13569 1480 aa15.82■□□□□ 0.12
RUNX1T1-225ENST00000520556 KDM4FA0A1W2PPD8 638 aa15.74■□□□□ 0.11
RUNX1T1-225ENST00000520556 CLASP1Q7Z460 1538 aa15.73■□□□□ 0.11
RUNX1T1-225ENST00000520556 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.11
RUNX1T1-225ENST00000520556 GAPVD1Q14C86 1478 aa15.66■□□□□ 0.1
RUNX1T1-225ENST00000520556 WIZO95785 1651 aa15.66■□□□□ 0.1
RUNX1T1-225ENST00000520556 TOPBP1Q92547 1522 aa15.65■□□□□ 0.1
RUNX1T1-225ENST00000520556 SYNJ1O43426 1573 aa15.64■□□□□ 0.09
RUNX1T1-225ENST00000520556 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
RUNX1T1-225ENST00000520556 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
RUNX1T1-225ENST00000520556 KIF13AQ9H1H9 1805 aa15.61■□□□□ 0.09
RUNX1T1-225ENST00000520556 TARBP1Q13395 1621 aaKnown RBP15.6■□□□□ 0.09
RUNX1T1-225ENST00000520556 FBXO41Q8TF61 875 aa15.57■□□□□ 0.08
RUNX1T1-225ENST00000520556 LMTK3Q96Q04 1460 aa15.56■□□□□ 0.08
RUNX1T1-225ENST00000520556 HECW2Q9P2P5 1572 aa15.56■□□□□ 0.08
RUNX1T1-225ENST00000520556 SNAPC4Q5SXM2 1469 aa15.54■□□□□ 0.08
RUNX1T1-225ENST00000520556 CHMP7Q8WUX9 453 aaPredicted RBP15.53■□□□□ 0.08
RUNX1T1-225ENST00000520556 ABCC8Q09428 1581 aa15.51■□□□□ 0.07
RUNX1T1-225ENST00000520556 DNMBPQ6XZF7 1577 aa15.5■□□□□ 0.07
RUNX1T1-225ENST00000520556 KDM6BO15054 1643 aa15.47■□□□□ 0.07
RUNX1T1-225ENST00000520556 TDRD9Q8NDG6 1382 aaKnown RBP15.45■□□□□ 0.06
RUNX1T1-225ENST00000520556 POLA1P09884 1462 aaPredicted RBP15.43■□□□□ 0.06
RUNX1T1-225ENST00000520556 MAGI1Q96QZ7 1491 aaPredicted RBP15.43■□□□□ 0.06
RUNX1T1-225ENST00000520556 SOCS7O14512 581 aa15.41■□□□□ 0.06
RUNX1T1-225ENST00000520556 ADGRL1O94910 1474 aa15.4■□□□□ 0.06
RUNX1T1-225ENST00000520556 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
RUNX1T1-225ENST00000520556 RAD54L2Q9Y4B4 1467 aa15.4■□□□□ 0.06
RUNX1T1-225ENST00000520556 FAM69CQ0P6D2 419 aa15.39■□□□□ 0.05
RUNX1T1-225ENST00000520556 TOP2AP11388 1531 aaKnown RBP15.38■□□□□ 0.05
RUNX1T1-225ENST00000520556 ABCC10Q5T3U5 1492 aa15.34■□□□□ 0.05
RUNX1T1-225ENST00000520556 WDR97A6NE52 1622 aa15.34■□□□□ 0.05
RUNX1T1-225ENST00000520556 ILDR2Q71H61 639 aa15.33■□□□□ 0.04
RUNX1T1-225ENST00000520556 GRIN2BQ13224 1484 aa15.33■□□□□ 0.04
RUNX1T1-225ENST00000520556 SOGA1O94964 1423 aa15.32■□□□□ 0.04
RUNX1T1-225ENST00000520556 DIP2BQ9P265 1576 aa15.31■□□□□ 0.04
RUNX1T1-225ENST00000520556 TSPOAP1O95153 1857 aa15.29■□□□□ 0.04
RUNX1T1-225ENST00000520556 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
RUNX1T1-225ENST00000520556 DISP3Q9P2K9 1392 aa15.24■□□□□ 0.03
RUNX1T1-225ENST00000520556 PBRM1Q86U86 1689 aa15.23■□□□□ 0.03
RUNX1T1-225ENST00000520556 MAPKBP1O60336 1514 aa15.22■□□□□ 0.03
RUNX1T1-225ENST00000520556 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
RUNX1T1-225ENST00000520556 FGD5Q6ZNL6 1462 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms