RNA–Protein interactions for RNA: ENST00000519697.1

SBSPON-202, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

TSL 2

Gene SBSPON, Length 1,972 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-202ENST00000519697 NISCHQ9Y2I1 1504 aa33.79■■■■□ 3
SBSPON-202ENST00000519697 CCDC180Q9P1Z9 1646 aa29.26■■■□□ 2.27
SBSPON-202ENST00000519697 ZCCHC6Q5VYS8 1495 aaKnown RBP28.35■■■□□ 2.13
SBSPON-202ENST00000519697 DCAF8L2P0C7V8 631 aa28.35■■■□□ 2.13
SBSPON-202ENST00000519697 ABCC9O60706 1549 aa28■■■□□ 2.07
SBSPON-202ENST00000519697 SHROOM4Q9ULL8 1493 aa27.99■■■□□ 2.07
SBSPON-202ENST00000519697 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
SBSPON-202ENST00000519697 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
SBSPON-202ENST00000519697 NACADO15069 1562 aa27.32■■□□□ 1.96
SBSPON-202ENST00000519697 SCRIBQ14160 1630 aa27.22■■□□□ 1.95
SBSPON-202ENST00000519697 RB1CC1Q8TDY2 1594 aa27.12■■□□□ 1.93
SBSPON-202ENST00000519697 SUPT5HO00267 1087 aaKnown RBP26.97■■□□□ 1.91
SBSPON-202ENST00000519697 UNC13AQ9UPW8 1703 aa26.59■■□□□ 1.85
SBSPON-202ENST00000519697 PABPN1Q86U42 306 aaKnown RBP eCLIP26.55■■□□□ 1.84
SBSPON-202ENST00000519697 CECR2Q9BXF3 1484 aa26.39■■□□□ 1.82
SBSPON-202ENST00000519697 BICRAQ9NZM4 1560 aa26.33■■□□□ 1.81
SBSPON-202ENST00000519697 RSF1Q96T23 1441 aaPredicted RBP26.3■■□□□ 1.8
SBSPON-202ENST00000519697 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
SBSPON-202ENST00000519697 BAZ1AQ9NRL2 1556 aaPredicted RBP26.05■■□□□ 1.76
SBSPON-202ENST00000519697 WIZO95785 1651 aa26■■□□□ 1.75
SBSPON-202ENST00000519697 SMARCA4P51532 1647 aa25.95■■□□□ 1.74
SBSPON-202ENST00000519697 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
SBSPON-202ENST00000519697 TOP2AP11388 1531 aaKnown RBP25.61■■□□□ 1.69
SBSPON-202ENST00000519697 EIF4G1Q04637 1599 aaKnown RBP25.56■■□□□ 1.68
SBSPON-202ENST00000519697 ATAD2BQ9ULI0 1458 aa25.55■■□□□ 1.68
SBSPON-202ENST00000519697 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
SBSPON-202ENST00000519697 CCDC88BA6NC98 1476 aa25.46■■□□□ 1.67
SBSPON-202ENST00000519697 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
SBSPON-202ENST00000519697 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
SBSPON-202ENST00000519697 NCAPD3P42695 1498 aa25.26■■□□□ 1.63
SBSPON-202ENST00000519697 TRIM41Q8WV44 630 aa25.23■■□□□ 1.63
SBSPON-202ENST00000519697 CC2D2AQ9P2K1 1620 aa25.2■■□□□ 1.63
SBSPON-202ENST00000519697 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
SBSPON-202ENST00000519697 ABCC8Q09428 1581 aa25.02■■□□□ 1.6
SBSPON-202ENST00000519697 FAM9AQ8IZU1 332 aaPredicted RBP24.96■■□□□ 1.59
SBSPON-202ENST00000519697 LOC105371045A0A1W2PR82 267 aa24.87■■□□□ 1.57
SBSPON-202ENST00000519697 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
SBSPON-202ENST00000519697 HRCP23327 699 aa24.82■■□□□ 1.56
SBSPON-202ENST00000519697 EHMT2Q96KQ7 1210 aa24.77■■□□□ 1.56
SBSPON-202ENST00000519697 WRNQ14191 1432 aaPredicted RBP eCLIP24.76■■□□□ 1.55
SBSPON-202ENST00000519697 CFTRP13569 1480 aa24.74■■□□□ 1.55
SBSPON-202ENST00000519697 CADPSQ9ULU8 1353 aa24.71■■□□□ 1.55
SBSPON-202ENST00000519697 SYNJ1O43426 1573 aa24.65■■□□□ 1.54
SBSPON-202ENST00000519697 NESP48681 1621 aa24.59■■□□□ 1.53
SBSPON-202ENST00000519697 SOGA1O94964 1423 aa24.57■■□□□ 1.52
SBSPON-202ENST00000519697 PCGF6Q9BYE7 350 aa24.51■■□□□ 1.51
SBSPON-202ENST00000519697 RUSC2Q8N2Y8 1516 aa24.5■■□□□ 1.51
SBSPON-202ENST00000519697 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
SBSPON-202ENST00000519697 CUX1P39880 1505 aa24.47■■□□□ 1.51
SBSPON-202ENST00000519697 TOP2BQ02880 1626 aa24.46■■□□□ 1.51
SBSPON-202ENST00000519697 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
SBSPON-202ENST00000519697 BIVM-ERCC5R4GMW8 1640 aa24.39■■□□□ 1.5
SBSPON-202ENST00000519697 CSRNP3Q8WYN3 585 aa24.38■■□□□ 1.49
SBSPON-202ENST00000519697 LAMC3Q9Y6N6 1575 aa24.37■■□□□ 1.49
SBSPON-202ENST00000519697 EEA1Q15075 1411 aa24.31■■□□□ 1.48
SBSPON-202ENST00000519697 PDS5BQ9NTI5 1447 aa24.27■■□□□ 1.48
SBSPON-202ENST00000519697 CEP164Q9UPV0 1460 aa24.27■■□□□ 1.48
SBSPON-202ENST00000519697 FGD5Q6ZNL6 1462 aa24.21■■□□□ 1.47
SBSPON-202ENST00000519697 UBTFP17480 764 aaKnown RBP24.2■■□□□ 1.46
SBSPON-202ENST00000519697 KIF21AQ7Z4S6 1674 aa24.17■■□□□ 1.46
SBSPON-202ENST00000519697 TOPBP1Q92547 1522 aa24.16■■□□□ 1.46
SBSPON-202ENST00000519697 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
SBSPON-202ENST00000519697 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
SBSPON-202ENST00000519697 URB2Q14146 1524 aaKnown RBP24.14■■□□□ 1.45
SBSPON-202ENST00000519697 KIF27Q86VH2 1401 aa24.12■■□□□ 1.45
SBSPON-202ENST00000519697 CUX2O14529 1486 aa24.11■■□□□ 1.45
SBSPON-202ENST00000519697 RAD54L2Q9Y4B4 1467 aa24.1■■□□□ 1.45
SBSPON-202ENST00000519697 GOLGA3Q08378 1498 aa24.08■■□□□ 1.45
SBSPON-202ENST00000519697 POLA1P09884 1462 aaPredicted RBP24.06■■□□□ 1.44
SBSPON-202ENST00000519697 PPARGC1BQ86YN6 1023 aaKnown RBP24.05■■□□□ 1.44
SBSPON-202ENST00000519697 RAPGEF2Q9Y4G8 1499 aa24.02■■□□□ 1.44
SBSPON-202ENST00000519697 TNIKQ9UKE5 1360 aa24.02■■□□□ 1.44
SBSPON-202ENST00000519697 RANGAP1P46060 587 aaPredicted RBP24■■□□□ 1.43
SBSPON-202ENST00000519697 KIF21BO75037 1637 aa23.99■■□□□ 1.43
SBSPON-202ENST00000519697 ERCC6Q03468 1493 aa23.97■■□□□ 1.43
SBSPON-202ENST00000519697 CEP162Q5TB80 1403 aa23.95■■□□□ 1.43
SBSPON-202ENST00000519697 MRC2Q9UBG0 1479 aa23.94■■□□□ 1.42
SBSPON-202ENST00000519697 IGF1RP08069 1367 aa23.93■■□□□ 1.42
SBSPON-202ENST00000519697 PRXQ9BXM0 1461 aa23.92■■□□□ 1.42
SBSPON-202ENST00000519697 ABCA10Q8WWZ4 1543 aa23.91■■□□□ 1.42
SBSPON-202ENST00000519697 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.42
SBSPON-202ENST00000519697 CARMIL1Q5VZK9 1371 aa23.84■■□□□ 1.41
SBSPON-202ENST00000519697 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.41
SBSPON-202ENST00000519697 ERICH3Q5RHP9 1530 aa23.81■■□□□ 1.4
SBSPON-202ENST00000519697 CLIP1P30622 1438 aa23.76■■□□□ 1.39
SBSPON-202ENST00000519697 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
SBSPON-202ENST00000519697 WDR62O43379 1518 aa23.75■■□□□ 1.39
SBSPON-202ENST00000519697 TARBP1Q13395 1621 aaKnown RBP23.74■■□□□ 1.39
SBSPON-202ENST00000519697 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
SBSPON-202ENST00000519697 AQRO60306 1485 aaKnown RBP eCLIP23.71■■□□□ 1.39
SBSPON-202ENST00000519697 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
SBSPON-202ENST00000519697 ABCA5Q8WWZ7 1642 aa23.68■■□□□ 1.38
SBSPON-202ENST00000519697 TTBK1Q5TCY1 1321 aaPredicted RBP23.67■■□□□ 1.38
SBSPON-202ENST00000519697 ZNF608Q9ULD9 1512 aaPredicted RBP23.65■■□□□ 1.38
SBSPON-202ENST00000519697 IFT140Q96RY7 1462 aa23.64■■□□□ 1.38
SBSPON-202ENST00000519697 CUL7Q14999 1698 aa23.59■■□□□ 1.37
SBSPON-202ENST00000519697 PBRM1Q86U86 1689 aa23.52■■□□□ 1.36
SBSPON-202ENST00000519697 P3H3Q8IVL6 736 aa23.52■■□□□ 1.36
SBSPON-202ENST00000519697 GRIN2BQ13224 1484 aa23.51■■□□□ 1.35
SBSPON-202ENST00000519697 VPS8Q8N3P4 1428 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms