RNA–Protein interactions for RNA: ENST00000519360.1

C1orf198-204, Transcript of chromosome 1 open reading frame 198, humanhuman

TSL 4

Gene C1orf198, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf198-204ENST00000519360 NISCHQ9Y2I1 1504 aa34.84■■■■□ 3.17
C1orf198-204ENST00000519360 CCDC180Q9P1Z9 1646 aa30.93■■■□□ 2.54
C1orf198-204ENST00000519360 ABCC9O60706 1549 aa29.98■■■□□ 2.39
C1orf198-204ENST00000519360 ZCCHC6Q5VYS8 1495 aaKnown RBP29.09■■■□□ 2.25
C1orf198-204ENST00000519360 NACADO15069 1562 aa28.97■■■□□ 2.23
C1orf198-204ENST00000519360 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
C1orf198-204ENST00000519360 DCAF8L2P0C7V8 631 aa28.92■■■□□ 2.22
C1orf198-204ENST00000519360 MYO15BQ96JP2 1530 aa28.88■■■□□ 2.21
C1orf198-204ENST00000519360 DCAF1Q9Y4B6 1507 aa28.84■■■□□ 2.21
C1orf198-204ENST00000519360 UNC13AQ9UPW8 1703 aa28.37■■■□□ 2.13
C1orf198-204ENST00000519360 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
C1orf198-204ENST00000519360 BICRAQ9NZM4 1560 aa28.1■■■□□ 2.09
C1orf198-204ENST00000519360 PABPN1Q86U42 306 aaKnown RBP eCLIP28.01■■■□□ 2.07
C1orf198-204ENST00000519360 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
C1orf198-204ENST00000519360 EIF4G1Q04637 1599 aaKnown RBP27.33■■□□□ 1.97
C1orf198-204ENST00000519360 DNAJC5BQ9UF47 199 aa27.26■■□□□ 1.95
C1orf198-204ENST00000519360 CC2D2AQ9P2K1 1620 aa27.16■■□□□ 1.94
C1orf198-204ENST00000519360 CECR2Q9BXF3 1484 aa27.11■■□□□ 1.93
C1orf198-204ENST00000519360 SMARCA4P51532 1647 aa27.01■■□□□ 1.92
C1orf198-204ENST00000519360 BAZ1AQ9NRL2 1556 aaPredicted RBP26.99■■□□□ 1.91
C1orf198-204ENST00000519360 MROH2BQ7Z745 1585 aa26.86■■□□□ 1.89
C1orf198-204ENST00000519360 ATAD2BQ9ULI0 1458 aa26.77■■□□□ 1.88
C1orf198-204ENST00000519360 SMARCA2P51531 1590 aa26.76■■□□□ 1.87
C1orf198-204ENST00000519360 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
C1orf198-204ENST00000519360 NCAPD3P42695 1498 aa26.71■■□□□ 1.87
C1orf198-204ENST00000519360 HMGXB3Q12766 1538 aa26.65■■□□□ 1.86
C1orf198-204ENST00000519360 RSF1Q96T23 1441 aaPredicted RBP26.61■■□□□ 1.85
C1orf198-204ENST00000519360 WIZO95785 1651 aa26.6■■□□□ 1.85
C1orf198-204ENST00000519360 BAZ1BQ9UIG0 1483 aaKnown RBP26.57■■□□□ 1.84
C1orf198-204ENST00000519360 TOP2AP11388 1531 aaKnown RBP26.33■■□□□ 1.81
C1orf198-204ENST00000519360 SUPT5HO00267 1087 aaKnown RBP26.05■■□□□ 1.76
C1orf198-204ENST00000519360 NESP48681 1621 aa26.02■■□□□ 1.76
C1orf198-204ENST00000519360 LAMC3Q9Y6N6 1575 aa26■■□□□ 1.75
C1orf198-204ENST00000519360 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
C1orf198-204ENST00000519360 CADPSQ9ULU8 1353 aa25.93■■□□□ 1.74
C1orf198-204ENST00000519360 CFTRP13569 1480 aa25.85■■□□□ 1.73
C1orf198-204ENST00000519360 ERCC6Q03468 1493 aa25.81■■□□□ 1.72
C1orf198-204ENST00000519360 PDS5BQ9NTI5 1447 aa25.78■■□□□ 1.72
C1orf198-204ENST00000519360 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
C1orf198-204ENST00000519360 PRDM2Q13029 1718 aa25.77■■□□□ 1.72
C1orf198-204ENST00000519360 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
C1orf198-204ENST00000519360 THOC2Q8NI27 1593 aaKnown RBP25.63■■□□□ 1.69
C1orf198-204ENST00000519360 CEP164Q9UPV0 1460 aa25.61■■□□□ 1.69
C1orf198-204ENST00000519360 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
C1orf198-204ENST00000519360 CUX2O14529 1486 aa25.47■■□□□ 1.67
C1orf198-204ENST00000519360 WDR62O43379 1518 aa25.46■■□□□ 1.67
C1orf198-204ENST00000519360 URB2Q14146 1524 aaKnown RBP25.4■■□□□ 1.66
C1orf198-204ENST00000519360 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
C1orf198-204ENST00000519360 TOPBP1Q92547 1522 aa25.28■■□□□ 1.64
C1orf198-204ENST00000519360 ABCC8Q09428 1581 aa25.27■■□□□ 1.64
C1orf198-204ENST00000519360 CUX1P39880 1505 aa25.19■■□□□ 1.62
C1orf198-204ENST00000519360 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
C1orf198-204ENST00000519360 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
C1orf198-204ENST00000519360 FGD5Q6ZNL6 1462 aa25.07■■□□□ 1.6
C1orf198-204ENST00000519360 BIVM-ERCC5R4GMW8 1640 aa25.06■■□□□ 1.6
C1orf198-204ENST00000519360 IFT140Q96RY7 1462 aa25.06■■□□□ 1.6
C1orf198-204ENST00000519360 SYNJ1O43426 1573 aa25.05■■□□□ 1.6
C1orf198-204ENST00000519360 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
C1orf198-204ENST00000519360 TARBP1Q13395 1621 aaKnown RBP25.01■■□□□ 1.59
C1orf198-204ENST00000519360 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
C1orf198-204ENST00000519360 SOGA1O94964 1423 aa24.95■■□□□ 1.58
C1orf198-204ENST00000519360 ZNF608Q9ULD9 1512 aaPredicted RBP24.93■■□□□ 1.58
C1orf198-204ENST00000519360 WDR97A6NE52 1622 aa24.9■■□□□ 1.58
C1orf198-204ENST00000519360 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
C1orf198-204ENST00000519360 ABCA10Q8WWZ4 1543 aa24.82■■□□□ 1.56
C1orf198-204ENST00000519360 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.56
C1orf198-204ENST00000519360 TDRD9Q8NDG6 1382 aaKnown RBP24.78■■□□□ 1.56
C1orf198-204ENST00000519360 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
C1orf198-204ENST00000519360 GAPVD1Q14C86 1478 aa24.69■■□□□ 1.54
C1orf198-204ENST00000519360 PBRM1Q86U86 1689 aa24.69■■□□□ 1.54
C1orf198-204ENST00000519360 GRIN2BQ13224 1484 aa24.65■■□□□ 1.54
C1orf198-204ENST00000519360 SNAPC4Q5SXM2 1469 aa24.61■■□□□ 1.53
C1orf198-204ENST00000519360 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
C1orf198-204ENST00000519360 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.52
C1orf198-204ENST00000519360 CHD1O14646 1710 aa24.55■■□□□ 1.52
C1orf198-204ENST00000519360 ERICH3Q5RHP9 1530 aa24.54■■□□□ 1.52
C1orf198-204ENST00000519360 KIF27Q86VH2 1401 aa24.53■■□□□ 1.52
C1orf198-204ENST00000519360 ADAMTS12P58397 1594 aa24.5■■□□□ 1.51
C1orf198-204ENST00000519360 SYNJ2O15056 1496 aa24.47■■□□□ 1.51
C1orf198-204ENST00000519360 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
C1orf198-204ENST00000519360 FBLN2P98095 1184 aa24.41■■□□□ 1.5
C1orf198-204ENST00000519360 FHAD1B1AJZ9 1412 aa24.4■■□□□ 1.5
C1orf198-204ENST00000519360 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
C1orf198-204ENST00000519360 OSCARQ8IYS5 282 aa24.39■■□□□ 1.49
C1orf198-204ENST00000519360 CUL7Q14999 1698 aa24.38■■□□□ 1.49
C1orf198-204ENST00000519360 CHMP7Q8WUX9 453 aaPredicted RBP24.38■■□□□ 1.49
C1orf198-204ENST00000519360 IGF1RP08069 1367 aa24.38■■□□□ 1.49
C1orf198-204ENST00000519360 DNAJC5Q9H3Z4 198 aa24.36■■□□□ 1.49
C1orf198-204ENST00000519360 GRIN2AQ12879 1464 aa24.35■■□□□ 1.49
C1orf198-204ENST00000519360 CARMIL1Q5VZK9 1371 aa24.26■■□□□ 1.47
C1orf198-204ENST00000519360 CLASP1Q7Z460 1538 aa24.25■■□□□ 1.47
C1orf198-204ENST00000519360 NUP160Q12769 1436 aa24.24■■□□□ 1.47
C1orf198-204ENST00000519360 CEP170Q5SW79 1584 aa24.24■■□□□ 1.47
C1orf198-204ENST00000519360 EEA1Q15075 1411 aa24.21■■□□□ 1.47
C1orf198-204ENST00000519360 RAPGEF2Q9Y4G8 1499 aa24.15■■□□□ 1.46
C1orf198-204ENST00000519360 PRXQ9BXM0 1461 aa24.13■■□□□ 1.45
C1orf198-204ENST00000519360 CSRNP3Q8WYN3 585 aa24.11■■□□□ 1.45
C1orf198-204ENST00000519360 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.45
C1orf198-204ENST00000519360 ARHGEF11O15085 1522 aa24.08■■□□□ 1.45
C1orf198-204ENST00000519360 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms