RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 NISCHQ9Y2I1 1504 aa50.1■■■■■ 5.61
TOP1MT-206ENST00000518951 CCDC180Q9P1Z9 1646 aa44.27■■■■■ 4.68
TOP1MT-206ENST00000518951 ABCC9O60706 1549 aa42.83■■■■■ 4.45
TOP1MT-206ENST00000518951 ZCCHC6Q5VYS8 1495 aaKnown RBP41.84■■■■■ 4.29
TOP1MT-206ENST00000518951 DCAF8L2P0C7V8 631 aa41.65■■■■■ 4.26
TOP1MT-206ENST00000518951 NACADO15069 1562 aa41.47■■■■■ 4.23
TOP1MT-206ENST00000518951 DCAF1Q9Y4B6 1507 aa41.43■■■■■ 4.22
TOP1MT-206ENST00000518951 RB1CC1Q8TDY2 1594 aa41.38■■■■■ 4.22
TOP1MT-206ENST00000518951 MYO15BQ96JP2 1530 aa41.37■■■■■ 4.21
TOP1MT-206ENST00000518951 UNC13AQ9UPW8 1703 aa40.6■■■■■ 4.09
TOP1MT-206ENST00000518951 SCRIBQ14160 1630 aa40.49■■■■■ 4.07
TOP1MT-206ENST00000518951 BICRAQ9NZM4 1560 aa40.21■■■■■ 4.03
TOP1MT-206ENST00000518951 PABPN1Q86U42 306 aaKnown RBP eCLIP40.14■■■■■ 4.02
TOP1MT-206ENST00000518951 SHROOM4Q9ULL8 1493 aa39.97■■■■□ 3.99
TOP1MT-206ENST00000518951 EIF4G1Q04637 1599 aaKnown RBP39.05■■■■□ 3.84
TOP1MT-206ENST00000518951 CECR2Q9BXF3 1484 aa39.03■■■■□ 3.84
TOP1MT-206ENST00000518951 DNAJC5BQ9UF47 199 aa38.89■■■■□ 3.82
TOP1MT-206ENST00000518951 CC2D2AQ9P2K1 1620 aa38.77■■■■□ 3.8
TOP1MT-206ENST00000518951 SMARCA4P51532 1647 aa38.77■■■■□ 3.8
TOP1MT-206ENST00000518951 BAZ1AQ9NRL2 1556 aaPredicted RBP38.75■■■■□ 3.79
TOP1MT-206ENST00000518951 MROH2BQ7Z745 1585 aa38.66■■■■□ 3.78
TOP1MT-206ENST00000518951 ATAD2BQ9ULI0 1458 aa38.4■■■■□ 3.74
TOP1MT-206ENST00000518951 RSF1Q96T23 1441 aaPredicted RBP38.39■■■■□ 3.74
TOP1MT-206ENST00000518951 PEG3Q9GZU2 1588 aa38.35■■■■□ 3.73
TOP1MT-206ENST00000518951 SMARCA2P51531 1590 aa38.33■■■■□ 3.73
TOP1MT-206ENST00000518951 WIZO95785 1651 aa38.3■■■■□ 3.72
TOP1MT-206ENST00000518951 NCAPD3P42695 1498 aa38.27■■■■□ 3.72
TOP1MT-206ENST00000518951 HMGXB3Q12766 1538 aa38.12■■■■□ 3.69
TOP1MT-206ENST00000518951 BAZ1BQ9UIG0 1483 aaKnown RBP38.08■■■■□ 3.69
TOP1MT-206ENST00000518951 SUPT5HO00267 1087 aaKnown RBP37.86■■■■□ 3.65
TOP1MT-206ENST00000518951 TOP2AP11388 1531 aaKnown RBP37.84■■■■□ 3.65
TOP1MT-206ENST00000518951 CCDC88BA6NC98 1476 aa37.43■■■■□ 3.58
TOP1MT-206ENST00000518951 NESP48681 1621 aa37.27■■■■□ 3.56
TOP1MT-206ENST00000518951 CADPSQ9ULU8 1353 aa37.18■■■■□ 3.54
TOP1MT-206ENST00000518951 LAMC3Q9Y6N6 1575 aa37.16■■■■□ 3.54
TOP1MT-206ENST00000518951 CFTRP13569 1480 aa37.09■■■■□ 3.53
TOP1MT-206ENST00000518951 PRDM2Q13029 1718 aa36.9■■■■□ 3.5
TOP1MT-206ENST00000518951 PDS5BQ9NTI5 1447 aa36.87■■■■□ 3.49
TOP1MT-206ENST00000518951 KIF21AQ7Z4S6 1674 aa36.85■■■■□ 3.49
TOP1MT-206ENST00000518951 ERCC6Q03468 1493 aa36.8■■■■□ 3.48
TOP1MT-206ENST00000518951 FANCD2Q9BXW9 1451 aa36.77■■■■□ 3.48
TOP1MT-206ENST00000518951 CEP164Q9UPV0 1460 aa36.65■■■■□ 3.46
TOP1MT-206ENST00000518951 THOC2Q8NI27 1593 aaKnown RBP36.55■■■■□ 3.44
TOP1MT-206ENST00000518951 MRC2Q9UBG0 1479 aa36.49■■■■□ 3.43
TOP1MT-206ENST00000518951 URB2Q14146 1524 aaKnown RBP36.41■■■■□ 3.42
TOP1MT-206ENST00000518951 WDR62O43379 1518 aa36.36■■■■□ 3.41
TOP1MT-206ENST00000518951 ABCC8Q09428 1581 aa36.28■■■■□ 3.4
TOP1MT-206ENST00000518951 TOPBP1Q92547 1522 aa36.27■■■■□ 3.4
TOP1MT-206ENST00000518951 DNMBPQ6XZF7 1577 aa36.25■■■■□ 3.39
TOP1MT-206ENST00000518951 CUX1P39880 1505 aa36.22■■■■□ 3.39
TOP1MT-206ENST00000518951 CUX2O14529 1486 aa36.19■■■■□ 3.38
TOP1MT-206ENST00000518951 WRNQ14191 1432 aaPredicted RBP eCLIP36.15■■■■□ 3.38
TOP1MT-206ENST00000518951 SYNJ1O43426 1573 aa36.09■■■■□ 3.37
TOP1MT-206ENST00000518951 BIVM-ERCC5R4GMW8 1640 aa36.04■■■■□ 3.36
TOP1MT-206ENST00000518951 TOP2BQ02880 1626 aa36.03■■■■□ 3.36
TOP1MT-206ENST00000518951 POLA1P09884 1462 aaPredicted RBP35.99■■■■□ 3.35
TOP1MT-206ENST00000518951 FGD5Q6ZNL6 1462 aa35.99■■■■□ 3.35
TOP1MT-206ENST00000518951 RAD54L2Q9Y4B4 1467 aa35.87■■■■□ 3.33
TOP1MT-206ENST00000518951 TARBP1Q13395 1621 aaKnown RBP35.85■■■■□ 3.33
TOP1MT-206ENST00000518951 IFT140Q96RY7 1462 aa35.84■■■■□ 3.33
TOP1MT-206ENST00000518951 SOGA1O94964 1423 aa35.84■■■■□ 3.33
TOP1MT-206ENST00000518951 ZNF608Q9ULD9 1512 aaPredicted RBP35.72■■■■□ 3.31
TOP1MT-206ENST00000518951 WDR97A6NE52 1622 aa35.7■■■■□ 3.31
TOP1MT-206ENST00000518951 TRIM41Q8WV44 630 aa35.68■■■■□ 3.3
TOP1MT-206ENST00000518951 CHIC1Q5VXU3 224 aa35.67■■■■□ 3.3
TOP1MT-206ENST00000518951 ABCA10Q8WWZ4 1543 aa35.64■■■■□ 3.3
TOP1MT-206ENST00000518951 TDRD9Q8NDG6 1382 aaKnown RBP35.6■■■■□ 3.29
TOP1MT-206ENST00000518951 AQRO60306 1485 aaKnown RBP eCLIP35.59■■■■□ 3.29
TOP1MT-206ENST00000518951 EIF4G3O43432 1585 aaKnown RBP35.58■■■■□ 3.29
TOP1MT-206ENST00000518951 ABCA5Q8WWZ7 1642 aa35.48■■■■□ 3.27
TOP1MT-206ENST00000518951 GAPVD1Q14C86 1478 aa35.43■■■■□ 3.26
TOP1MT-206ENST00000518951 PBRM1Q86U86 1689 aa35.37■■■■□ 3.25
TOP1MT-206ENST00000518951 GRIN2BQ13224 1484 aa35.33■■■■□ 3.25
TOP1MT-206ENST00000518951 KIF27Q86VH2 1401 aa35.32■■■■□ 3.24
TOP1MT-206ENST00000518951 RUSC2Q8N2Y8 1516 aa35.31■■■■□ 3.24
TOP1MT-206ENST00000518951 SNAPC4Q5SXM2 1469 aa35.24■■■■□ 3.23
TOP1MT-206ENST00000518951 ERICH3Q5RHP9 1530 aa35.21■■■■□ 3.23
TOP1MT-206ENST00000518951 IGF1RP08069 1367 aa35.17■■■■□ 3.22
TOP1MT-206ENST00000518951 MAGI1Q96QZ7 1491 aaPredicted RBP35.16■■■■□ 3.22
TOP1MT-206ENST00000518951 ADAMTS12P58397 1594 aa35.09■■■■□ 3.21
TOP1MT-206ENST00000518951 CHD1O14646 1710 aa35.07■■■■□ 3.2
TOP1MT-206ENST00000518951 SYNJ2O15056 1496 aa35.04■■■■□ 3.2
TOP1MT-206ENST00000518951 FHAD1B1AJZ9 1412 aa35.02■■■■□ 3.2
TOP1MT-206ENST00000518951 FBLN2P98095 1184 aa35.02■■■■□ 3.2
TOP1MT-206ENST00000518951 CUL7Q14999 1698 aa35■■■■□ 3.19
TOP1MT-206ENST00000518951 FAM9AQ8IZU1 332 aaPredicted RBP35■■■■□ 3.19
TOP1MT-206ENST00000518951 EEA1Q15075 1411 aa34.98■■■■□ 3.19
TOP1MT-206ENST00000518951 CHMP7Q8WUX9 453 aaPredicted RBP34.97■■■■□ 3.19
TOP1MT-206ENST00000518951 CARMIL1Q5VZK9 1371 aa34.95■■■■□ 3.19
TOP1MT-206ENST00000518951 CSRNP3Q8WYN3 585 aa34.93■■■■□ 3.18
TOP1MT-206ENST00000518951 GRIN2AQ12879 1464 aa34.9■■■■□ 3.18
TOP1MT-206ENST00000518951 OSCARQ8IYS5 282 aa34.83■■■■□ 3.17
TOP1MT-206ENST00000518951 PRXQ9BXM0 1461 aa34.83■■■■□ 3.17
TOP1MT-206ENST00000518951 RAPGEF2Q9Y4G8 1499 aa34.79■■■■□ 3.16
TOP1MT-206ENST00000518951 CEP170Q5SW79 1584 aa34.74■■■■□ 3.15
TOP1MT-206ENST00000518951 NUP160Q12769 1436 aa34.72■■■■□ 3.15
TOP1MT-206ENST00000518951 CLASP1Q7Z460 1538 aa34.65■■■■□ 3.14
TOP1MT-206ENST00000518951 KIF21BO75037 1637 aa34.65■■■■□ 3.14
TOP1MT-206ENST00000518951 EHMT2Q96KQ7 1210 aa34.53■■■■□ 3.12
TOP1MT-206ENST00000518951 KIAA0586Q9BVV6 1533 aa34.51■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms