RNA–Protein interactions for RNA: ENST00000518710.5

RB1CC1-206, Transcript of RB1 inducible coiled-coil 1, humanhuman

TSL 3

Gene RB1CC1, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-206ENST00000518710 NISCHQ9Y2I1 1504 aa61.62■■■■■ 7.45
RB1CC1-206ENST00000518710 CCDC180Q9P1Z9 1646 aa54.61■■■■■ 6.33
RB1CC1-206ENST00000518710 ABCC9O60706 1549 aa52.81■■■■■ 6.04
RB1CC1-206ENST00000518710 ZCCHC6Q5VYS8 1495 aaKnown RBP51.49■■■■■ 5.83
RB1CC1-206ENST00000518710 NACADO15069 1562 aa51.15■■■■■ 5.78
RB1CC1-206ENST00000518710 DCAF8L2P0C7V8 631 aa51.12■■■■■ 5.77
RB1CC1-206ENST00000518710 RB1CC1Q8TDY2 1594 aa51.08■■■■■ 5.77
RB1CC1-206ENST00000518710 MYO15BQ96JP2 1530 aa51.03■■■■■ 5.76
RB1CC1-206ENST00000518710 DCAF1Q9Y4B6 1507 aa51.03■■■■■ 5.76
RB1CC1-206ENST00000518710 UNC13AQ9UPW8 1703 aa49.96■■■■■ 5.59
RB1CC1-206ENST00000518710 SCRIBQ14160 1630 aa49.86■■■■■ 5.57
RB1CC1-206ENST00000518710 BICRAQ9NZM4 1560 aa49.51■■■■■ 5.52
RB1CC1-206ENST00000518710 PABPN1Q86U42 306 aaKnown RBP eCLIP49.37■■■■■ 5.49
RB1CC1-206ENST00000518710 SHROOM4Q9ULL8 1493 aa49.07■■■■■ 5.45
RB1CC1-206ENST00000518710 EIF4G1Q04637 1599 aaKnown RBP48.17■■■■■ 5.3
RB1CC1-206ENST00000518710 CECR2Q9BXF3 1484 aa47.92■■■■■ 5.26
RB1CC1-206ENST00000518710 DNAJC5BQ9UF47 199 aa47.84■■■■■ 5.25
RB1CC1-206ENST00000518710 CC2D2AQ9P2K1 1620 aa47.81■■■■■ 5.24
RB1CC1-206ENST00000518710 BAZ1AQ9NRL2 1556 aaPredicted RBP47.75■■■■■ 5.24
RB1CC1-206ENST00000518710 SMARCA4P51532 1647 aa47.74■■■■■ 5.23
RB1CC1-206ENST00000518710 MROH2BQ7Z745 1585 aa47.5■■■■■ 5.19
RB1CC1-206ENST00000518710 ATAD2BQ9ULI0 1458 aa47.28■■■■■ 5.16
RB1CC1-206ENST00000518710 SMARCA2P51531 1590 aa47.28■■■■■ 5.16
RB1CC1-206ENST00000518710 PEG3Q9GZU2 1588 aa47.25■■■■■ 5.15
RB1CC1-206ENST00000518710 NCAPD3P42695 1498 aa47.14■■■■■ 5.14
RB1CC1-206ENST00000518710 RSF1Q96T23 1441 aaPredicted RBP47.13■■■■■ 5.14
RB1CC1-206ENST00000518710 WIZO95785 1651 aa47.04■■■■■ 5.12
RB1CC1-206ENST00000518710 HMGXB3Q12766 1538 aa47.04■■■■■ 5.12
RB1CC1-206ENST00000518710 BAZ1BQ9UIG0 1483 aaKnown RBP46.95■■■■■ 5.11
RB1CC1-206ENST00000518710 TOP2AP11388 1531 aaKnown RBP46.6■■■■■ 5.05
RB1CC1-206ENST00000518710 SUPT5HO00267 1087 aaKnown RBP46.31■■■■■ 5
RB1CC1-206ENST00000518710 CCDC88BA6NC98 1476 aa45.99■■■■■ 4.95
RB1CC1-206ENST00000518710 LAMC3Q9Y6N6 1575 aa45.87■■■■■ 4.93
RB1CC1-206ENST00000518710 NESP48681 1621 aa45.86■■■■■ 4.93
RB1CC1-206ENST00000518710 CADPSQ9ULU8 1353 aa45.79■■■■■ 4.92
RB1CC1-206ENST00000518710 CFTRP13569 1480 aa45.67■■■■■ 4.9
RB1CC1-206ENST00000518710 PDS5BQ9NTI5 1447 aa45.49■■■■■ 4.87
RB1CC1-206ENST00000518710 ERCC6Q03468 1493 aa45.48■■■■■ 4.87
RB1CC1-206ENST00000518710 PRDM2Q13029 1718 aa45.47■■■■■ 4.87
RB1CC1-206ENST00000518710 KIF21AQ7Z4S6 1674 aa45.4■■■■■ 4.86
RB1CC1-206ENST00000518710 FANCD2Q9BXW9 1451 aa45.31■■■■■ 4.84
RB1CC1-206ENST00000518710 CEP164Q9UPV0 1460 aa45.22■■■■■ 4.83
RB1CC1-206ENST00000518710 THOC2Q8NI27 1593 aaKnown RBP45.12■■■■■ 4.81
RB1CC1-206ENST00000518710 MRC2Q9UBG0 1479 aa45.04■■■■■ 4.8
RB1CC1-206ENST00000518710 WDR62O43379 1518 aa44.89■■■■■ 4.78
RB1CC1-206ENST00000518710 URB2Q14146 1524 aaKnown RBP44.84■■■■■ 4.77
RB1CC1-206ENST00000518710 CUX2O14529 1486 aa44.8■■■■■ 4.76
RB1CC1-206ENST00000518710 DNMBPQ6XZF7 1577 aa44.69■■■■■ 4.74
RB1CC1-206ENST00000518710 TOPBP1Q92547 1522 aa44.66■■■■■ 4.74
RB1CC1-206ENST00000518710 ABCC8Q09428 1581 aa44.66■■■■■ 4.74
RB1CC1-206ENST00000518710 CUX1P39880 1505 aa44.55■■■■■ 4.72
RB1CC1-206ENST00000518710 WRNQ14191 1432 aaPredicted RBP eCLIP44.45■■■■■ 4.71
RB1CC1-206ENST00000518710 SYNJ1O43426 1573 aa44.36■■■■■ 4.69
RB1CC1-206ENST00000518710 BIVM-ERCC5R4GMW8 1640 aa44.35■■■■■ 4.69
RB1CC1-206ENST00000518710 TOP2BQ02880 1626 aa44.33■■■■■ 4.69
RB1CC1-206ENST00000518710 POLA1P09884 1462 aaPredicted RBP44.32■■■■■ 4.69
RB1CC1-206ENST00000518710 FGD5Q6ZNL6 1462 aa44.31■■■■■ 4.68
RB1CC1-206ENST00000518710 IFT140Q96RY7 1462 aa44.24■■■■■ 4.67
RB1CC1-206ENST00000518710 TARBP1Q13395 1621 aaKnown RBP44.14■■■■■ 4.66
RB1CC1-206ENST00000518710 RAD54L2Q9Y4B4 1467 aa44.09■■■■■ 4.65
RB1CC1-206ENST00000518710 SOGA1O94964 1423 aa44.09■■■■■ 4.65
RB1CC1-206ENST00000518710 WDR97A6NE52 1622 aa43.98■■■■■ 4.63
RB1CC1-206ENST00000518710 ZNF608Q9ULD9 1512 aaPredicted RBP43.97■■■■■ 4.63
RB1CC1-206ENST00000518710 EIF4G3O43432 1585 aaKnown RBP43.9■■■■■ 4.62
RB1CC1-206ENST00000518710 ABCA10Q8WWZ4 1543 aa43.89■■■■■ 4.62
RB1CC1-206ENST00000518710 TDRD9Q8NDG6 1382 aaKnown RBP43.77■■■■■ 4.6
RB1CC1-206ENST00000518710 AQRO60306 1485 aaKnown RBP eCLIP43.76■■■■■ 4.6
RB1CC1-206ENST00000518710 ABCA5Q8WWZ7 1642 aa43.73■■■■■ 4.59
RB1CC1-206ENST00000518710 TRIM41Q8WV44 630 aa43.71■■■■■ 4.59
RB1CC1-206ENST00000518710 GAPVD1Q14C86 1478 aa43.63■■■■■ 4.57
RB1CC1-206ENST00000518710 PBRM1Q86U86 1689 aa43.59■■■■■ 4.57
RB1CC1-206ENST00000518710 GRIN2BQ13224 1484 aa43.56■■■■■ 4.56
RB1CC1-206ENST00000518710 CHIC1Q5VXU3 224 aa43.55■■■■■ 4.56
RB1CC1-206ENST00000518710 KIF27Q86VH2 1401 aa43.47■■■■■ 4.55
RB1CC1-206ENST00000518710 SNAPC4Q5SXM2 1469 aa43.45■■■■■ 4.55
RB1CC1-206ENST00000518710 MAGI1Q96QZ7 1491 aaPredicted RBP43.4■■■■■ 4.54
RB1CC1-206ENST00000518710 ERICH3Q5RHP9 1530 aa43.39■■■■■ 4.54
RB1CC1-206ENST00000518710 ADAMTS12P58397 1594 aa43.28■■■■■ 4.52
RB1CC1-206ENST00000518710 RUSC2Q8N2Y8 1516 aa43.23■■■■■ 4.51
RB1CC1-206ENST00000518710 CHD1O14646 1710 aa43.23■■■■■ 4.51
RB1CC1-206ENST00000518710 SYNJ2O15056 1496 aa43.21■■■■■ 4.51
RB1CC1-206ENST00000518710 IGF1RP08069 1367 aa43.16■■■■■ 4.5
RB1CC1-206ENST00000518710 FHAD1B1AJZ9 1412 aa43.15■■■■■ 4.5
RB1CC1-206ENST00000518710 CUL7Q14999 1698 aa43.15■■■■■ 4.5
RB1CC1-206ENST00000518710 FBLN2P98095 1184 aa43.08■■■■■ 4.49
RB1CC1-206ENST00000518710 CHMP7Q8WUX9 453 aaPredicted RBP43.06■■■■■ 4.48
RB1CC1-206ENST00000518710 EEA1Q15075 1411 aa43.04■■■■■ 4.48
RB1CC1-206ENST00000518710 GRIN2AQ12879 1464 aa43.01■■■■■ 4.48
RB1CC1-206ENST00000518710 CARMIL1Q5VZK9 1371 aa42.94■■■■■ 4.46
RB1CC1-206ENST00000518710 OSCARQ8IYS5 282 aa42.93■■■■■ 4.46
RB1CC1-206ENST00000518710 FAM9AQ8IZU1 332 aaPredicted RBP42.8■■■■■ 4.44
RB1CC1-206ENST00000518710 CSRNP3Q8WYN3 585 aa42.8■■■■■ 4.44
RB1CC1-206ENST00000518710 CEP170Q5SW79 1584 aa42.8■■■■■ 4.44
RB1CC1-206ENST00000518710 RAPGEF2Q9Y4G8 1499 aa42.8■■■■■ 4.44
RB1CC1-206ENST00000518710 NUP160Q12769 1436 aa42.79■■■■■ 4.44
RB1CC1-206ENST00000518710 PRXQ9BXM0 1461 aa42.78■■■■■ 4.44
RB1CC1-206ENST00000518710 CLASP1Q7Z460 1538 aa42.76■■■■■ 4.44
RB1CC1-206ENST00000518710 DNAJC5Q9H3Z4 198 aa42.63■■■■■ 4.41
RB1CC1-206ENST00000518710 KIF21BO75037 1637 aa42.6■■■■■ 4.41
RB1CC1-206ENST00000518710 KIAA0586Q9BVV6 1533 aa42.5■■■■■ 4.39
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms