RNA–Protein interactions for RNA: ENST00000518576.1

EFCAB3-203, Transcript of EF-hand calcium binding domain 3, humanhuman

TSL 5

Gene EFCAB3, Length 710 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3-203ENST00000518576 AEBP2Q6ZN18 517 aaPredicted RBP25.03■■□□□ 1.6
EFCAB3-203ENST00000518576 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
EFCAB3-203ENST00000518576 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.2
EFCAB3-203ENST00000518576 SENP3Q9H4L4 574 aaPredicted RBP21.36■■□□□ 1.01
EFCAB3-203ENST00000518576 PHF23Q9BUL5 403 aaPredicted RBP21.03■□□□□ 0.96
EFCAB3-203ENST00000518576 CCDC180Q9P1Z9 1646 aa20.06■□□□□ 0.8
EFCAB3-203ENST00000518576 FOXD1Q16676 465 aa19.93■□□□□ 0.78
EFCAB3-203ENST00000518576 ABCC9O60706 1549 aa19.25■□□□□ 0.67
EFCAB3-203ENST00000518576 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
EFCAB3-203ENST00000518576 MYO15BQ96JP2 1530 aa18.82■□□□□ 0.6
EFCAB3-203ENST00000518576 NACADO15069 1562 aa18.79■□□□□ 0.6
EFCAB3-203ENST00000518576 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.6
EFCAB3-203ENST00000518576 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
EFCAB3-203ENST00000518576 RB1CC1Q8TDY2 1594 aa18.74■□□□□ 0.59
EFCAB3-203ENST00000518576 MSH5O43196 834 aa18.73■□□□□ 0.59
EFCAB3-203ENST00000518576 POTEDQ86YR6 584 aa18.57■□□□□ 0.56
EFCAB3-203ENST00000518576 PIAS4Q8N2W9 510 aaPredicted RBP18.53■□□□□ 0.56
EFCAB3-203ENST00000518576 PPP6R1Q9UPN7 881 aa18.49■□□□□ 0.55
EFCAB3-203ENST00000518576 DCAF8L2P0C7V8 631 aa18.47■□□□□ 0.55
EFCAB3-203ENST00000518576 ADRA2BP18089 450 aa18.37■□□□□ 0.53
EFCAB3-203ENST00000518576 UNC13AQ9UPW8 1703 aa18.25■□□□□ 0.51
EFCAB3-203ENST00000518576 SHROOM4Q9ULL8 1493 aa18.16■□□□□ 0.5
EFCAB3-203ENST00000518576 SCRIBQ14160 1630 aa18.15■□□□□ 0.5
EFCAB3-203ENST00000518576 BICRAQ9NZM4 1560 aa18.12■□□□□ 0.49
EFCAB3-203ENST00000518576 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
EFCAB3-203ENST00000518576 EIF4G1Q04637 1599 aaKnown RBP17.65■□□□□ 0.42
EFCAB3-203ENST00000518576 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
EFCAB3-203ENST00000518576 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
EFCAB3-203ENST00000518576 SMARCA4P51532 1647 aa17.45■□□□□ 0.38
EFCAB3-203ENST00000518576 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
EFCAB3-203ENST00000518576 CECR2Q9BXF3 1484 aa17.43■□□□□ 0.38
EFCAB3-203ENST00000518576 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
EFCAB3-203ENST00000518576 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
EFCAB3-203ENST00000518576 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
EFCAB3-203ENST00000518576 ATAD2BQ9ULI0 1458 aa17.3■□□□□ 0.36
EFCAB3-203ENST00000518576 MROH2BQ7Z745 1585 aa17.29■□□□□ 0.36
EFCAB3-203ENST00000518576 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
EFCAB3-203ENST00000518576 RSF1Q96T23 1441 aaPredicted RBP17.17■□□□□ 0.34
EFCAB3-203ENST00000518576 BAZ1BQ9UIG0 1483 aaKnown RBP17.17■□□□□ 0.34
EFCAB3-203ENST00000518576 WIZO95785 1651 aa17.1■□□□□ 0.33
EFCAB3-203ENST00000518576 TOP2AP11388 1531 aaKnown RBP17.04■□□□□ 0.32
EFCAB3-203ENST00000518576 DMRT2Q9Y5R5 561 aa16.93■□□□□ 0.3
EFCAB3-203ENST00000518576 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
EFCAB3-203ENST00000518576 LAMC3Q9Y6N6 1575 aa16.85■□□□□ 0.29
EFCAB3-203ENST00000518576 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
EFCAB3-203ENST00000518576 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.27
EFCAB3-203ENST00000518576 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
EFCAB3-203ENST00000518576 CFTRP13569 1480 aa16.73■□□□□ 0.27
EFCAB3-203ENST00000518576 NESP48681 1621 aa16.7■□□□□ 0.26
EFCAB3-203ENST00000518576 PDS5BQ9NTI5 1447 aa16.69■□□□□ 0.26
EFCAB3-203ENST00000518576 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
EFCAB3-203ENST00000518576 SUPT5HO00267 1087 aaKnown RBP16.66■□□□□ 0.26
EFCAB3-203ENST00000518576 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
EFCAB3-203ENST00000518576 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.24
EFCAB3-203ENST00000518576 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
EFCAB3-203ENST00000518576 CEP164Q9UPV0 1460 aa16.55■□□□□ 0.24
EFCAB3-203ENST00000518576 THOC2Q8NI27 1593 aaKnown RBP16.55■□□□□ 0.24
EFCAB3-203ENST00000518576 CUX2O14529 1486 aa16.52■□□□□ 0.23
EFCAB3-203ENST00000518576 MRC2Q9UBG0 1479 aa16.5■□□□□ 0.23
EFCAB3-203ENST00000518576 WDR62O43379 1518 aa16.48■□□□□ 0.23
EFCAB3-203ENST00000518576 ABCC8Q09428 1581 aa16.41■□□□□ 0.22
EFCAB3-203ENST00000518576 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
EFCAB3-203ENST00000518576 URB2Q14146 1524 aaKnown RBP16.37■□□□□ 0.21
EFCAB3-203ENST00000518576 DNMBPQ6XZF7 1577 aa16.36■□□□□ 0.21
EFCAB3-203ENST00000518576 TOPBP1Q92547 1522 aa16.32■□□□□ 0.2
EFCAB3-203ENST00000518576 HOXD11P31277 338 aaPredicted RBP16.27■□□□□ 0.2
EFCAB3-203ENST00000518576 CUX1P39880 1505 aa16.24■□□□□ 0.19
EFCAB3-203ENST00000518576 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
EFCAB3-203ENST00000518576 WRNQ14191 1432 aaPredicted RBP eCLIP16.21■□□□□ 0.19
EFCAB3-203ENST00000518576 BIVM-ERCC5R4GMW8 1640 aa16.21■□□□□ 0.19
EFCAB3-203ENST00000518576 TOP2BQ02880 1626 aa16.2■□□□□ 0.18
EFCAB3-203ENST00000518576 POLA1P09884 1462 aaPredicted RBP16.2■□□□□ 0.18
EFCAB3-203ENST00000518576 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
EFCAB3-203ENST00000518576 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
EFCAB3-203ENST00000518576 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
EFCAB3-203ENST00000518576 TARBP1Q13395 1621 aaKnown RBP16.15■□□□□ 0.18
EFCAB3-203ENST00000518576 SYNJ1O43426 1573 aa16.14■□□□□ 0.17
EFCAB3-203ENST00000518576 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
EFCAB3-203ENST00000518576 SOGA1O94964 1423 aa16.08■□□□□ 0.16
EFCAB3-203ENST00000518576 ABCA10Q8WWZ4 1543 aa16.08■□□□□ 0.16
EFCAB3-203ENST00000518576 DCAF8L1A6NGE4 600 aa16.07■□□□□ 0.16
EFCAB3-203ENST00000518576 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
EFCAB3-203ENST00000518576 EIF4G3O43432 1585 aaKnown RBP16.06■□□□□ 0.16
EFCAB3-203ENST00000518576 RAD54L2Q9Y4B4 1467 aa16.03■□□□□ 0.16
EFCAB3-203ENST00000518576 ZNF608Q9ULD9 1512 aaPredicted RBP16.03■□□□□ 0.16
EFCAB3-203ENST00000518576 ABCA5Q8WWZ7 1642 aa16■□□□□ 0.15
EFCAB3-203ENST00000518576 RNF39Q9H2S5 420 aa15.99■□□□□ 0.15
EFCAB3-203ENST00000518576 AQRO60306 1485 aaKnown RBP eCLIP15.94■□□□□ 0.14
EFCAB3-203ENST00000518576 GRIN2BQ13224 1484 aa15.94■□□□□ 0.14
EFCAB3-203ENST00000518576 GAPVD1Q14C86 1478 aa15.94■□□□□ 0.14
EFCAB3-203ENST00000518576 MAGI1Q96QZ7 1491 aaPredicted RBP15.93■□□□□ 0.14
EFCAB3-203ENST00000518576 PBRM1Q86U86 1689 aa15.92■□□□□ 0.14
EFCAB3-203ENST00000518576 TDRD9Q8NDG6 1382 aaKnown RBP15.92■□□□□ 0.14
EFCAB3-203ENST00000518576 ERICH3Q5RHP9 1530 aa15.91■□□□□ 0.14
EFCAB3-203ENST00000518576 KIF27Q86VH2 1401 aa15.87■□□□□ 0.13
EFCAB3-203ENST00000518576 SNAPC4Q5SXM2 1469 aa15.86■□□□□ 0.13
EFCAB3-203ENST00000518576 SYNJ2O15056 1496 aa15.84■□□□□ 0.13
EFCAB3-203ENST00000518576 ADAMTS12P58397 1594 aa15.83■□□□□ 0.13
EFCAB3-203ENST00000518576 TRIM41Q8WV44 630 aa15.82■□□□□ 0.12
EFCAB3-203ENST00000518576 CUL7Q14999 1698 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms