RNA–Protein interactions for RNA: ENST00000518564.1

PPP2CB-204, Transcript of protein phosphatase 2 catalytic subunit beta, humanhuman

TSL 3 BASIC

Gene PPP2CB, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2CB-204ENST00000518564 UTP3Q9NQZ2 479 aaKnown RBP eCLIP33.54■■■□□ 2.963e-8■■■■■ 64.5
PPP2CB-204ENST00000518564 SF3B1O75533 1304 aaKnown RBP eCLIP34.56■■■■□ 3.129e-7■■■■■ 57.4
PPP2CB-204ENST00000518564 PRPF4O43172 522 aaKnown RBP eCLIP30.06■■■□□ 2.45e-29■■■■■ 32.8
PPP2CB-204ENST00000518564 GTF2F1P35269 517 aaKnown RBP eCLIP34.9■■■■□ 3.181e-17■■■■■ 32.7
PPP2CB-204ENST00000518564 EFTUD2Q15029 972 aaKnown RBP eCLIP29.82■■■□□ 2.363e-6■■■■■ 32.7
PPP2CB-204ENST00000518564 SUB1P53999 127 aaKnown RBP eCLIP23.7■■□□□ 1.381e-6■■■■■ 30.7
PPP2CB-204ENST00000518564 DDX6P26196 483 aaKnown RBP eCLIP33.65■■■□□ 2.981e-18■■■■■ 30
PPP2CB-204ENST00000518564 LIN28BQ6ZN17 250 aaKnown RBP eCLIP35.63■■■■□ 3.291e-8■■■■■ 29.6
PPP2CB-204ENST00000518564 XRN2Q9H0D6 950 aaKnown RBP eCLIP37.42■■■■□ 3.584e-8■■■■□ 25.2
PPP2CB-204ENST00000518564 NCBP2P52298 156 aaKnown RBP eCLIP28.91■■■□□ 2.224e-10■■■■□ 23.4
PPP2CB-204ENST00000518564 SMNDC1O75940 238 aaKnown RBP eCLIP28.35■■■□□ 2.135e-6■■■■□ 22.7
PPP2CB-204ENST00000518564 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP26.9■■□□□ 1.96e-7■■■■□ 22.4
PPP2CB-204ENST00000518564 QKIQ96PU8 341 aaKnown RBP eCLIP31.38■■■□□ 2.613e-6■■■■□ 21.4
PPP2CB-204ENST00000518564 EIF3GO75821 320 aaKnown RBP eCLIP22.18■■□□□ 1.141e-6■■■■□ 21
PPP2CB-204ENST00000518564 PUM2Q8TB72 1066 aaKnown RBP eCLIP28.9■■■□□ 2.221e-9■■■■□ 20
PPP2CB-204ENST00000518564 FUBP3Q96I24 572 aaKnown RBP eCLIP33.74■■■□□ 2.992e-6■■■■□ 19.8
PPP2CB-204ENST00000518564 DDX3XO00571 662 aaKnown RBP eCLIP32.21■■■□□ 2.751e-26■■■□□ 17.3
PPP2CB-204ENST00000518564 FUSP35637 526 aaKnown RBP eCLIP21.13■□□□□ 0.971e-5■■■□□ 16.6
PPP2CB-204ENST00000518564 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP34.16■■■■□ 3.062e-12■■■□□ 15.7
PPP2CB-204ENST00000518564 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP31.17■■■□□ 2.585e-8■■■□□ 15.6
PPP2CB-204ENST00000518564 AQRO60306 1485 aaKnown RBP eCLIP55.83■■■■■ 6.537e-9■■■□□ 14.9
PPP2CB-204ENST00000518564 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP51.13■■■■■ 5.772e-7■■■□□ 14.9
PPP2CB-204ENST00000518564 EIF3HO15372 352 aaKnown RBP eCLIP30.07■■■□□ 2.43e-8■■■□□ 14.6
PPP2CB-204ENST00000518564 PCBP2Q15366 365 aaKnown RBP eCLIP29.54■■■□□ 2.329e-8■■□□□ 14.1
PPP2CB-204ENST00000518564 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP29.63■■■□□ 2.333e-18■■□□□ 13.8
PPP2CB-204ENST00000518564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP48.3■■■■■ 5.321e-9■■□□□ 13.8
PPP2CB-204ENST00000518564 GRSF1Q12849 480 aaKnown RBP eCLIP33.33■■■□□ 2.935e-13■■□□□ 13.3
PPP2CB-204ENST00000518564 FTOQ9C0B1 505 aaKnown RBP eCLIP35.98■■■■□ 3.356e-6■■□□□ 13.3
PPP2CB-204ENST00000518564 KHSRPQ92945 711 aaKnown RBP eCLIP34.56■■■■□ 3.121e-6■■□□□ 13.3
PPP2CB-204ENST00000518564 RPS3P23396 243 aaKnown RBP eCLIP30.55■■■□□ 2.481e-6■■□□□ 13
PPP2CB-204ENST00000518564 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.26■■■□□ 2.433e-8■■□□□ 12.2
PPP2CB-204ENST00000518564 PABPC4Q13310 644 aaKnown RBP eCLIP38.01■■■■□ 3.683e-7■■□□□ 12.2
PPP2CB-204ENST00000518564 AATFQ9NY61 560 aaKnown RBP eCLIP38.46■■■■□ 3.751e-7■■□□□ 11.9
PPP2CB-204ENST00000518564 EIF3DO15371 548 aaKnown RBP eCLIP34.13■■■■□ 3.052e-8■■□□□ 11.7
PPP2CB-204ENST00000518564 TARDBPQ13148 414 aaKnown RBP eCLIP31.54■■■□□ 2.645e-6■□□□□ 11.3
PPP2CB-204ENST00000518564 LARP4Q71RC2 724 aaKnown RBP eCLIP28.82■■■□□ 2.24e-9■□□□□ 11
PPP2CB-204ENST00000518564 DDX51Q8N8A6 666 aaKnown RBP eCLIP32.7■■■□□ 2.831e-18■□□□□ 10.8
PPP2CB-204ENST00000518564 SND1Q7KZF4 910 aaKnown RBP eCLIP32.6■■■□□ 2.819e-7■□□□□ 10.4
PPP2CB-204ENST00000518564 PUM1Q14671 1186 aaKnown RBP eCLIP32.74■■■□□ 2.835e-6■□□□□ 10.2
PPP2CB-204ENST00000518564 U2AF2P26368 475 aaKnown RBP eCLIP35.17■■■■□ 3.224e-8■□□□□ 10
PPP2CB-204ENST00000518564 FXR2P51116 673 aaKnown RBP eCLIP35.08■■■■□ 3.211e-26■□□□□ 10
PPP2CB-204ENST00000518564 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP32.62■■■□□ 2.817e-17■□□□□ 9.9
PPP2CB-204ENST00000518564 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP42.86■■■■■ 4.459e-6■□□□□ 9.4
PPP2CB-204ENST00000518564 FMR1Q06787 632 aaKnown RBP eCLIP39.58■■■■□ 3.934e-17■□□□□ 8.9
PPP2CB-204ENST00000518564 DDX55Q8NHQ9 600 aaKnown RBP eCLIP38.67■■■■□ 3.782e-6■□□□□ 8.3
PPP2CB-204ENST00000518564 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP26.14■■□□□ 1.785e-12■□□□□ 8.2
Retrieved 46 of 46 RNA–protein pairs in 31.2 ms