RNA–Protein interactions for RNA: ENST00000518226.1

MTCL1-206, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 4

Gene MTCL1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-206ENST00000518226 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
MTCL1-206ENST00000518226 CCDC180Q9P1Z9 1646 aa15.39■□□□□ 0.05
MTCL1-206ENST00000518226 ABCC9O60706 1549 aa14.97□□□□□ -0.01
MTCL1-206ENST00000518226 DCAF8L2P0C7V8 631 aa14.8□□□□□ -0.04
MTCL1-206ENST00000518226 ZCCHC6Q5VYS8 1495 aaKnown RBP14.68□□□□□ -0.06
MTCL1-206ENST00000518226 DCAF1Q9Y4B6 1507 aa14.5□□□□□ -0.09
MTCL1-206ENST00000518226 NACADO15069 1562 aa14.48□□□□□ -0.09
MTCL1-206ENST00000518226 MYO15BQ96JP2 1530 aa14.45□□□□□ -0.1
MTCL1-206ENST00000518226 RB1CC1Q8TDY2 1594 aa14.43□□□□□ -0.1
MTCL1-206ENST00000518226 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
MTCL1-206ENST00000518226 SCRIBQ14160 1630 aa14.18□□□□□ -0.14
MTCL1-206ENST00000518226 PABPN1Q86U42 306 aaKnown RBP eCLIP14.12□□□□□ -0.15
MTCL1-206ENST00000518226 UNC13AQ9UPW8 1703 aa14□□□□□ -0.17
MTCL1-206ENST00000518226 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.17
MTCL1-206ENST00000518226 CECR2Q9BXF3 1484 aa13.7□□□□□ -0.22
MTCL1-206ENST00000518226 EIF4G1Q04637 1599 aaKnown RBP13.6□□□□□ -0.23
MTCL1-206ENST00000518226 BAZ1AQ9NRL2 1556 aaPredicted RBP13.59□□□□□ -0.23
MTCL1-206ENST00000518226 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.24
MTCL1-206ENST00000518226 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
MTCL1-206ENST00000518226 RSF1Q96T23 1441 aaPredicted RBP13.55□□□□□ -0.24
MTCL1-206ENST00000518226 SMARCA4P51532 1647 aa13.54□□□□□ -0.24
MTCL1-206ENST00000518226 DNAJC5BQ9UF47 199 aa13.53□□□□□ -0.24
MTCL1-206ENST00000518226 CC2D2AQ9P2K1 1620 aa13.48□□□□□ -0.25
MTCL1-206ENST00000518226 ATAD2BQ9ULI0 1458 aa13.46□□□□□ -0.25
MTCL1-206ENST00000518226 SMARCA2P51531 1590 aa13.42□□□□□ -0.26
MTCL1-206ENST00000518226 WIZO95785 1651 aa13.4□□□□□ -0.26
MTCL1-206ENST00000518226 NCAPD3P42695 1498 aa13.4□□□□□ -0.26
MTCL1-206ENST00000518226 PEG3Q9GZU2 1588 aa13.37□□□□□ -0.27
MTCL1-206ENST00000518226 BAZ1BQ9UIG0 1483 aaKnown RBP13.37□□□□□ -0.27
MTCL1-206ENST00000518226 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
MTCL1-206ENST00000518226 TOP2AP11388 1531 aaKnown RBP13.28□□□□□ -0.28
MTCL1-206ENST00000518226 CCDC88BA6NC98 1476 aa13.18□□□□□ -0.3
MTCL1-206ENST00000518226 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
MTCL1-206ENST00000518226 NESP48681 1621 aa13.02□□□□□ -0.33
MTCL1-206ENST00000518226 CFTRP13569 1480 aa13□□□□□ -0.33
MTCL1-206ENST00000518226 LAMC3Q9Y6N6 1575 aa12.95□□□□□ -0.34
MTCL1-206ENST00000518226 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
MTCL1-206ENST00000518226 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
MTCL1-206ENST00000518226 ERCC6Q03468 1493 aa12.89□□□□□ -0.35
MTCL1-206ENST00000518226 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
MTCL1-206ENST00000518226 ABCC8Q09428 1581 aa12.77□□□□□ -0.36
MTCL1-206ENST00000518226 CHIC1Q5VXU3 224 aa12.77□□□□□ -0.37
MTCL1-206ENST00000518226 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
MTCL1-206ENST00000518226 WRNQ14191 1432 aaPredicted RBP eCLIP12.77□□□□□ -0.37
MTCL1-206ENST00000518226 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.37
MTCL1-206ENST00000518226 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
MTCL1-206ENST00000518226 MRC2Q9UBG0 1479 aa12.76□□□□□ -0.37
MTCL1-206ENST00000518226 URB2Q14146 1524 aaKnown RBP12.73□□□□□ -0.37
MTCL1-206ENST00000518226 CUX1P39880 1505 aa12.71□□□□□ -0.38
MTCL1-206ENST00000518226 TOPBP1Q92547 1522 aa12.7□□□□□ -0.38
MTCL1-206ENST00000518226 DNMBPQ6XZF7 1577 aa12.68□□□□□ -0.38
MTCL1-206ENST00000518226 SYNJ1O43426 1573 aa12.66□□□□□ -0.38
MTCL1-206ENST00000518226 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
MTCL1-206ENST00000518226 WDR62O43379 1518 aa12.66□□□□□ -0.38
MTCL1-206ENST00000518226 FGD5Q6ZNL6 1462 aa12.64□□□□□ -0.39
MTCL1-206ENST00000518226 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
MTCL1-206ENST00000518226 SOGA1O94964 1423 aa12.62□□□□□ -0.39
MTCL1-206ENST00000518226 POLA1P09884 1462 aaPredicted RBP12.61□□□□□ -0.39
MTCL1-206ENST00000518226 RAD54L2Q9Y4B4 1467 aa12.6□□□□□ -0.39
MTCL1-206ENST00000518226 BIVM-ERCC5R4GMW8 1640 aa12.59□□□□□ -0.39
MTCL1-206ENST00000518226 CUX2O14529 1486 aa12.58□□□□□ -0.4
MTCL1-206ENST00000518226 IFT140Q96RY7 1462 aa12.56□□□□□ -0.4
MTCL1-206ENST00000518226 TDRD9Q8NDG6 1382 aaKnown RBP12.55□□□□□ -0.4
MTCL1-206ENST00000518226 FAM9AQ8IZU1 332 aaPredicted RBP12.54□□□□□ -0.4
MTCL1-206ENST00000518226 ABCA10Q8WWZ4 1543 aa12.5□□□□□ -0.41
MTCL1-206ENST00000518226 ZNF608Q9ULD9 1512 aaPredicted RBP12.5□□□□□ -0.41
MTCL1-206ENST00000518226 AQRO60306 1485 aaKnown RBP eCLIP12.49□□□□□ -0.41
MTCL1-206ENST00000518226 KIF27Q86VH2 1401 aa12.49□□□□□ -0.41
MTCL1-206ENST00000518226 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
MTCL1-206ENST00000518226 RUSC2Q8N2Y8 1516 aa12.47□□□□□ -0.41
MTCL1-206ENST00000518226 GAPVD1Q14C86 1478 aa12.46□□□□□ -0.42
MTCL1-206ENST00000518226 CSRNP3Q8WYN3 585 aa12.45□□□□□ -0.42
MTCL1-206ENST00000518226 IGF1RP08069 1367 aa12.43□□□□□ -0.42
MTCL1-206ENST00000518226 EEA1Q15075 1411 aa12.41□□□□□ -0.42
MTCL1-206ENST00000518226 GRIN2BQ13224 1484 aa12.4□□□□□ -0.42
MTCL1-206ENST00000518226 EHMT2Q96KQ7 1210 aa12.4□□□□□ -0.42
MTCL1-206ENST00000518226 FBLN2P98095 1184 aa12.39□□□□□ -0.43
MTCL1-206ENST00000518226 WDR97A6NE52 1622 aa12.39□□□□□ -0.43
MTCL1-206ENST00000518226 EIF4G3O43432 1585 aaKnown RBP12.39□□□□□ -0.43
MTCL1-206ENST00000518226 ABCA5Q8WWZ7 1642 aa12.37□□□□□ -0.43
MTCL1-206ENST00000518226 CARMIL1Q5VZK9 1371 aa12.36□□□□□ -0.43
MTCL1-206ENST00000518226 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
MTCL1-206ENST00000518226 SNAPC4Q5SXM2 1469 aa12.35□□□□□ -0.43
MTCL1-206ENST00000518226 ERICH3Q5RHP9 1530 aa12.35□□□□□ -0.43
MTCL1-206ENST00000518226 FHAD1B1AJZ9 1412 aa12.32□□□□□ -0.44
MTCL1-206ENST00000518226 MAGI1Q96QZ7 1491 aaPredicted RBP12.31□□□□□ -0.44
MTCL1-206ENST00000518226 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
MTCL1-206ENST00000518226 PBRM1Q86U86 1689 aa12.29□□□□□ -0.44
MTCL1-206ENST00000518226 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
MTCL1-206ENST00000518226 UBTFP17480 764 aaKnown RBP12.29□□□□□ -0.44
MTCL1-206ENST00000518226 RAPGEF2Q9Y4G8 1499 aa12.28□□□□□ -0.44
MTCL1-206ENST00000518226 SYNJ2O15056 1496 aa12.27□□□□□ -0.44
MTCL1-206ENST00000518226 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
MTCL1-206ENST00000518226 CUL7Q14999 1698 aa12.25□□□□□ -0.45
MTCL1-206ENST00000518226 GOLGA3Q08378 1498 aa12.23□□□□□ -0.45
MTCL1-206ENST00000518226 GRIN2AQ12879 1464 aa12.23□□□□□ -0.45
MTCL1-206ENST00000518226 OSCARQ8IYS5 282 aa12.23□□□□□ -0.45
MTCL1-206ENST00000518226 RANGAP1P46060 587 aaPredicted RBP12.21□□□□□ -0.45
MTCL1-206ENST00000518226 KIF21BO75037 1637 aa12.2□□□□□ -0.46
MTCL1-206ENST00000518226 NUP160Q12769 1436 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms