RNA–Protein interactions for RNA: ENST00000517584.5

RNF19A-203, Transcript of ring finger protein 19A, RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene RNF19A, Length 317 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19A-203ENST00000517584 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
RNF19A-203ENST00000517584 CHIC1Q5VXU3 224 aa29.29■■■□□ 2.28
RNF19A-203ENST00000517584 NISCHQ9Y2I1 1504 aa28.1■■■□□ 2.09
RNF19A-203ENST00000517584 PHF23Q9BUL5 403 aaPredicted RBP25.85■■□□□ 1.73
RNF19A-203ENST00000517584 ABCC9O60706 1549 aa25.55■■□□□ 1.68
RNF19A-203ENST00000517584 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
RNF19A-203ENST00000517584 SENP3Q9H4L4 574 aaPredicted RBP24.87■■□□□ 1.57
RNF19A-203ENST00000517584 DNAJC5BQ9UF47 199 aa24.3■■□□□ 1.48
RNF19A-203ENST00000517584 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.44
RNF19A-203ENST00000517584 PLPPR3Q6T4P5 718 aa24.01■■□□□ 1.43
RNF19A-203ENST00000517584 DCAF8L2P0C7V8 631 aa24■■□□□ 1.43
RNF19A-203ENST00000517584 NACADO15069 1562 aa23.88■■□□□ 1.41
RNF19A-203ENST00000517584 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.41
RNF19A-203ENST00000517584 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
RNF19A-203ENST00000517584 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
RNF19A-203ENST00000517584 MYO15BQ96JP2 1530 aa23.46■■□□□ 1.35
RNF19A-203ENST00000517584 ZCCHC6Q5VYS8 1495 aaKnown RBP23.22■■□□□ 1.31
RNF19A-203ENST00000517584 DCAF1Q9Y4B6 1507 aa23.11■■□□□ 1.29
RNF19A-203ENST00000517584 FOXD1Q16676 465 aa23.04■■□□□ 1.28
RNF19A-203ENST00000517584 SCRIBQ14160 1630 aa23.03■■□□□ 1.28
RNF19A-203ENST00000517584 CECR2Q9BXF3 1484 aa22.99■■□□□ 1.27
RNF19A-203ENST00000517584 CC2D2AQ9P2K1 1620 aa22.98■■□□□ 1.27
RNF19A-203ENST00000517584 SHROOM4Q9ULL8 1493 aa22.96■■□□□ 1.27
RNF19A-203ENST00000517584 EIF4G1Q04637 1599 aaKnown RBP22.88■■□□□ 1.25
RNF19A-203ENST00000517584 PPP6R1Q9UPN7 881 aa22.63■■□□□ 1.21
RNF19A-203ENST00000517584 ADRA2BP18089 450 aa22.61■■□□□ 1.21
RNF19A-203ENST00000517584 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
RNF19A-203ENST00000517584 NCAPD3P42695 1498 aa22.13■■□□□ 1.13
RNF19A-203ENST00000517584 ATAD2BQ9ULI0 1458 aa22.06■■□□□ 1.12
RNF19A-203ENST00000517584 ERCC6Q03468 1493 aa22■■□□□ 1.11
RNF19A-203ENST00000517584 CUX2O14529 1486 aa21.96■■□□□ 1.11
RNF19A-203ENST00000517584 NESP48681 1621 aa21.91■■□□□ 1.1
RNF19A-203ENST00000517584 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
RNF19A-203ENST00000517584 SMARCA2P51531 1590 aa21.88■■□□□ 1.09
RNF19A-203ENST00000517584 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
RNF19A-203ENST00000517584 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
RNF19A-203ENST00000517584 BAZ1BQ9UIG0 1483 aaKnown RBP21.78■■□□□ 1.08
RNF19A-203ENST00000517584 BAZ1AQ9NRL2 1556 aaPredicted RBP21.76■■□□□ 1.07
RNF19A-203ENST00000517584 MROH2BQ7Z745 1585 aa21.7■■□□□ 1.06
RNF19A-203ENST00000517584 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
RNF19A-203ENST00000517584 THOC2Q8NI27 1593 aaKnown RBP21.58■■□□□ 1.05
RNF19A-203ENST00000517584 LAMC3Q9Y6N6 1575 aa21.56■■□□□ 1.04
RNF19A-203ENST00000517584 PDS5BQ9NTI5 1447 aa21.52■■□□□ 1.04
RNF19A-203ENST00000517584 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
RNF19A-203ENST00000517584 KIF21AQ7Z4S6 1674 aa21.47■■□□□ 1.03
RNF19A-203ENST00000517584 WIZO95785 1651 aa21.39■■□□□ 1.01
RNF19A-203ENST00000517584 KCNA4P22459 653 aa21.36■■□□□ 1.01
RNF19A-203ENST00000517584 MRC2Q9UBG0 1479 aa21.33■■□□□ 1.01
RNF19A-203ENST00000517584 TRIM41Q8WV44 630 aa21.32■■□□□ 1
RNF19A-203ENST00000517584 WDR62O43379 1518 aa21.25■□□□□ 0.99
RNF19A-203ENST00000517584 PPP4R3CPQ6ZMV5 832 aa21.23■□□□□ 0.99
RNF19A-203ENST00000517584 FANCD2Q9BXW9 1451 aa21.21■□□□□ 0.99
RNF19A-203ENST00000517584 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
RNF19A-203ENST00000517584 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
RNF19A-203ENST00000517584 CFTRP13569 1480 aa21.16■□□□□ 0.98
RNF19A-203ENST00000517584 OSCARQ8IYS5 282 aa21.07■□□□□ 0.96
RNF19A-203ENST00000517584 URB2Q14146 1524 aaKnown RBP21.07■□□□□ 0.96
RNF19A-203ENST00000517584 TOP2AP11388 1531 aaKnown RBP21.05■□□□□ 0.96
RNF19A-203ENST00000517584 MSH5O43196 834 aa21■□□□□ 0.95
RNF19A-203ENST00000517584 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
RNF19A-203ENST00000517584 ZNF608Q9ULD9 1512 aaPredicted RBP20.88■□□□□ 0.93
RNF19A-203ENST00000517584 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
RNF19A-203ENST00000517584 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
RNF19A-203ENST00000517584 TOPBP1Q92547 1522 aa20.78■□□□□ 0.92
RNF19A-203ENST00000517584 PRDM2Q13029 1718 aa20.72■□□□□ 0.91
RNF19A-203ENST00000517584 RIMBP3CA6NJZ7 1639 aa20.71■□□□□ 0.91
RNF19A-203ENST00000517584 RIMBP3BA6NNM3 1639 aa20.71■□□□□ 0.91
RNF19A-203ENST00000517584 RIMBP3Q9UFD9 1639 aa20.71■□□□□ 0.91
RNF19A-203ENST00000517584 AQRO60306 1485 aaKnown RBP eCLIP20.69■□□□□ 0.9
RNF19A-203ENST00000517584 CYB5RLQ6IPT4 315 aa20.66■□□□□ 0.9
RNF19A-203ENST00000517584 ARHGEF11O15085 1522 aa20.65■□□□□ 0.9
RNF19A-203ENST00000517584 ABCC8Q09428 1581 aa20.64■□□□□ 0.9
RNF19A-203ENST00000517584 SCAF1Q9H7N4 1312 aaKnown RBP20.64■□□□□ 0.89
RNF19A-203ENST00000517584 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
RNF19A-203ENST00000517584 FBLN2P98095 1184 aa20.62■□□□□ 0.89
RNF19A-203ENST00000517584 EIF4G3O43432 1585 aaKnown RBP20.62■□□□□ 0.89
RNF19A-203ENST00000517584 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
RNF19A-203ENST00000517584 TARBP1Q13395 1621 aaKnown RBP20.57■□□□□ 0.88
RNF19A-203ENST00000517584 POLA1P09884 1462 aaPredicted RBP20.56■□□□□ 0.88
RNF19A-203ENST00000517584 TDRD9Q8NDG6 1382 aaKnown RBP20.55■□□□□ 0.88
RNF19A-203ENST00000517584 NPM3O75607 178 aaKnown RBP20.54■□□□□ 0.88
RNF19A-203ENST00000517584 SOGA1O94964 1423 aa20.52■□□□□ 0.87
RNF19A-203ENST00000517584 CNKSR2Q8WXI2 1034 aa20.51■□□□□ 0.87
RNF19A-203ENST00000517584 CHD1O14646 1710 aa20.48■□□□□ 0.87
RNF19A-203ENST00000517584 ARAP1Q96P48 1450 aa20.48■□□□□ 0.87
RNF19A-203ENST00000517584 TRHP20396 242 aaPredicted RBP20.46■□□□□ 0.87
RNF19A-203ENST00000517584 EHMT2Q96KQ7 1210 aa20.44■□□□□ 0.86
RNF19A-203ENST00000517584 SLC4A1APQ9BWU0 796 aaKnown RBP20.42■□□□□ 0.86
RNF19A-203ENST00000517584 FGD5Q6ZNL6 1462 aa20.41■□□□□ 0.86
RNF19A-203ENST00000517584 SNAPC4Q5SXM2 1469 aa20.4■□□□□ 0.86
RNF19A-203ENST00000517584 CHMP7Q8WUX9 453 aaPredicted RBP20.4■□□□□ 0.86
RNF19A-203ENST00000517584 CUX1P39880 1505 aa20.37■□□□□ 0.85
RNF19A-203ENST00000517584 MAPK8IP2Q13387 824 aaPredicted RBP20.36■□□□□ 0.85
RNF19A-203ENST00000517584 GRIN2BQ13224 1484 aa20.29■□□□□ 0.84
RNF19A-203ENST00000517584 CLASP1Q7Z460 1538 aa20.28■□□□□ 0.84
RNF19A-203ENST00000517584 MAGI1Q96QZ7 1491 aaPredicted RBP20.27■□□□□ 0.84
RNF19A-203ENST00000517584 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
RNF19A-203ENST00000517584 SYNJ2O15056 1496 aa20.23■□□□□ 0.83
RNF19A-203ENST00000517584 GAPVD1Q14C86 1478 aa20.22■□□□□ 0.83
RNF19A-203ENST00000517584 SYNJ1O43426 1573 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms