RNA–Protein interactions for RNA: ENST00000517257.1

RNU6-709P-201, Transcript of RNA, U6 small nuclear 709, pseudogene, humanhuman

BASIC

Gene RNU6-709P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-709P-201ENST00000517257 NISCHQ9Y2I1 1504 aa11.08□□□□□ -0.64
RNU6-709P-201ENST00000517257 CCDC180Q9P1Z9 1646 aa9.74□□□□□ -0.85
RNU6-709P-201ENST00000517257 ZCCHC6Q5VYS8 1495 aaKnown RBP9.29□□□□□ -0.92
RNU6-709P-201ENST00000517257 ABCC9O60706 1549 aa9.21□□□□□ -0.93
RNU6-709P-201ENST00000517257 DCAF1Q9Y4B6 1507 aa9.17□□□□□ -0.94
RNU6-709P-201ENST00000517257 DCAF8L2P0C7V8 631 aa9.17□□□□□ -0.94
RNU6-709P-201ENST00000517257 MYO15BQ96JP2 1530 aa9.08□□□□□ -0.96
RNU6-709P-201ENST00000517257 NACADO15069 1562 aa9.06□□□□□ -0.96
RNU6-709P-201ENST00000517257 RB1CC1Q8TDY2 1594 aa9.01□□□□□ -0.97
RNU6-709P-201ENST00000517257 SHROOM4Q9ULL8 1493 aa8.97□□□□□ -0.97
RNU6-709P-201ENST00000517257 SCRIBQ14160 1630 aa8.92□□□□□ -0.98
RNU6-709P-201ENST00000517257 UNC13AQ9UPW8 1703 aa8.86□□□□□ -0.99
RNU6-709P-201ENST00000517257 AEBP2Q6ZN18 517 aaPredicted RBP8.8□□□□□ -1
RNU6-709P-201ENST00000517257 BICRAQ9NZM4 1560 aa8.7□□□□□ -1.02
RNU6-709P-201ENST00000517257 PABPN1Q86U42 306 aaKnown RBP eCLIP8.65□□□□□ -1.02
RNU6-709P-201ENST00000517257 SUPT5HO00267 1087 aaKnown RBP8.62□□□□□ -1.03
RNU6-709P-201ENST00000517257 CECR2Q9BXF3 1484 aa8.59□□□□□ -1.03
RNU6-709P-201ENST00000517257 BAZ1AQ9NRL2 1556 aaPredicted RBP8.57□□□□□ -1.04
RNU6-709P-201ENST00000517257 SMARCA4P51532 1647 aa8.55□□□□□ -1.04
RNU6-709P-201ENST00000517257 MROH2BQ7Z745 1585 aa8.55□□□□□ -1.04
RNU6-709P-201ENST00000517257 RSF1Q96T23 1441 aaPredicted RBP8.54□□□□□ -1.04
RNU6-709P-201ENST00000517257 WIZO95785 1651 aa8.5□□□□□ -1.05
RNU6-709P-201ENST00000517257 EIF4G1Q04637 1599 aaKnown RBP8.45□□□□□ -1.06
RNU6-709P-201ENST00000517257 PEG3Q9GZU2 1588 aa8.44□□□□□ -1.06
RNU6-709P-201ENST00000517257 SMARCA2P51531 1590 aa8.42□□□□□ -1.06
RNU6-709P-201ENST00000517257 TOP2AP11388 1531 aaKnown RBP8.41□□□□□ -1.06
RNU6-709P-201ENST00000517257 ATAD2BQ9ULI0 1458 aa8.39□□□□□ -1.07
RNU6-709P-201ENST00000517257 BAZ1BQ9UIG0 1483 aaKnown RBP8.36□□□□□ -1.07
RNU6-709P-201ENST00000517257 CC2D2AQ9P2K1 1620 aa8.36□□□□□ -1.07
RNU6-709P-201ENST00000517257 HMGXB3Q12766 1538 aa8.34□□□□□ -1.08
RNU6-709P-201ENST00000517257 NCAPD3P42695 1498 aa8.33□□□□□ -1.08
RNU6-709P-201ENST00000517257 CCDC88BA6NC98 1476 aa8.3□□□□□ -1.08
RNU6-709P-201ENST00000517257 CHIC1Q5VXU3 224 aa8.21□□□□□ -1.1
RNU6-709P-201ENST00000517257 PRDM2Q13029 1718 aa8.19□□□□□ -1.1
RNU6-709P-201ENST00000517257 POTEDQ86YR6 584 aa8.13□□□□□ -1.11
RNU6-709P-201ENST00000517257 DNAJC5BQ9UF47 199 aa8.13□□□□□ -1.11
RNU6-709P-201ENST00000517257 CFTRP13569 1480 aa8.13□□□□□ -1.11
RNU6-709P-201ENST00000517257 TRIM41Q8WV44 630 aa8.12□□□□□ -1.11
RNU6-709P-201ENST00000517257 ABCC8Q09428 1581 aa8.12□□□□□ -1.11
RNU6-709P-201ENST00000517257 CADPSQ9ULU8 1353 aa8.11□□□□□ -1.11
RNU6-709P-201ENST00000517257 LAMC3Q9Y6N6 1575 aa8.1□□□□□ -1.11
RNU6-709P-201ENST00000517257 WRNQ14191 1432 aaPredicted RBP eCLIP8.06□□□□□ -1.12
RNU6-709P-201ENST00000517257 NESP48681 1621 aa8.06□□□□□ -1.12
RNU6-709P-201ENST00000517257 BIVM-ERCC5R4GMW8 1640 aa8.04□□□□□ -1.12
RNU6-709P-201ENST00000517257 SYNJ1O43426 1573 aa8.04□□□□□ -1.12
RNU6-709P-201ENST00000517257 FANCD2Q9BXW9 1451 aa8.03□□□□□ -1.12
RNU6-709P-201ENST00000517257 TOP2BQ02880 1626 aa8.03□□□□□ -1.12
RNU6-709P-201ENST00000517257 KIF21AQ7Z4S6 1674 aa8.02□□□□□ -1.13
RNU6-709P-201ENST00000517257 PDS5BQ9NTI5 1447 aa8.02□□□□□ -1.13
RNU6-709P-201ENST00000517257 CEP164Q9UPV0 1460 aa8□□□□□ -1.13
RNU6-709P-201ENST00000517257 CUX1P39880 1505 aa8□□□□□ -1.13
RNU6-709P-201ENST00000517257 DNMBPQ6XZF7 1577 aa7.97□□□□□ -1.13
RNU6-709P-201ENST00000517257 FAM9AQ8IZU1 332 aaPredicted RBP7.96□□□□□ -1.14
RNU6-709P-201ENST00000517257 TOPBP1Q92547 1522 aa7.94□□□□□ -1.14
RNU6-709P-201ENST00000517257 EEA1Q15075 1411 aa7.94□□□□□ -1.14
RNU6-709P-201ENST00000517257 SOGA1O94964 1423 aa7.93□□□□□ -1.14
RNU6-709P-201ENST00000517257 ERCC6Q03468 1493 aa7.93□□□□□ -1.14
RNU6-709P-201ENST00000517257 FGD5Q6ZNL6 1462 aa7.93□□□□□ -1.14
RNU6-709P-201ENST00000517257 URB2Q14146 1524 aaKnown RBP7.93□□□□□ -1.14
RNU6-709P-201ENST00000517257 MRC2Q9UBG0 1479 aa7.92□□□□□ -1.14
RNU6-709P-201ENST00000517257 RUSC2Q8N2Y8 1516 aa7.9□□□□□ -1.14
RNU6-709P-201ENST00000517257 POLA1P09884 1462 aaPredicted RBP7.89□□□□□ -1.15
RNU6-709P-201ENST00000517257 LOC105371045A0A1W2PR82 267 aa7.89□□□□□ -1.15
RNU6-709P-201ENST00000517257 KIF27Q86VH2 1401 aa7.88□□□□□ -1.15
RNU6-709P-201ENST00000517257 CSRNP3Q8WYN3 585 aa7.88□□□□□ -1.15
RNU6-709P-201ENST00000517257 THOC2Q8NI27 1593 aaKnown RBP7.88□□□□□ -1.15
RNU6-709P-201ENST00000517257 WDR62O43379 1518 aa7.88□□□□□ -1.15
RNU6-709P-201ENST00000517257 WDR97A6NE52 1622 aa7.87□□□□□ -1.15
RNU6-709P-201ENST00000517257 CUX2O14529 1486 aa7.87□□□□□ -1.15
RNU6-709P-201ENST00000517257 ABCA10Q8WWZ4 1543 aa7.86□□□□□ -1.15
RNU6-709P-201ENST00000517257 RAD54L2Q9Y4B4 1467 aa7.86□□□□□ -1.15
RNU6-709P-201ENST00000517257 KIF21BO75037 1637 aa7.85□□□□□ -1.15
RNU6-709P-201ENST00000517257 EHMT2Q96KQ7 1210 aa7.84□□□□□ -1.15
RNU6-709P-201ENST00000517257 TARBP1Q13395 1621 aaKnown RBP7.84□□□□□ -1.15
RNU6-709P-201ENST00000517257 GOLGA3Q08378 1498 aa7.82□□□□□ -1.16
RNU6-709P-201ENST00000517257 ABCA5Q8WWZ7 1642 aa7.81□□□□□ -1.16
RNU6-709P-201ENST00000517257 IFT140Q96RY7 1462 aa7.81□□□□□ -1.16
RNU6-709P-201ENST00000517257 PBRM1Q86U86 1689 aa7.8□□□□□ -1.16
RNU6-709P-201ENST00000517257 ERICH3Q5RHP9 1530 aa7.8□□□□□ -1.16
RNU6-709P-201ENST00000517257 CUL7Q14999 1698 aa7.79□□□□□ -1.16
RNU6-709P-201ENST00000517257 UBTFP17480 764 aaKnown RBP7.79□□□□□ -1.16
RNU6-709P-201ENST00000517257 GAPVD1Q14C86 1478 aa7.79□□□□□ -1.16
RNU6-709P-201ENST00000517257 PRXQ9BXM0 1461 aa7.79□□□□□ -1.16
RNU6-709P-201ENST00000517257 IGF1RP08069 1367 aa7.78□□□□□ -1.16
RNU6-709P-201ENST00000517257 TDRD9Q8NDG6 1382 aaKnown RBP7.78□□□□□ -1.16
RNU6-709P-201ENST00000517257 RAPGEF2Q9Y4G8 1499 aa7.78□□□□□ -1.16
RNU6-709P-201ENST00000517257 TNIKQ9UKE5 1360 aa7.77□□□□□ -1.17
RNU6-709P-201ENST00000517257 CARMIL1Q5VZK9 1371 aa7.76□□□□□ -1.17
RNU6-709P-201ENST00000517257 EIF4G3O43432 1585 aaKnown RBP7.76□□□□□ -1.17
RNU6-709P-201ENST00000517257 AQRO60306 1485 aaKnown RBP eCLIP7.75□□□□□ -1.17
RNU6-709P-201ENST00000517257 ZNF608Q9ULD9 1512 aaPredicted RBP7.74□□□□□ -1.17
RNU6-709P-201ENST00000517257 GRIN2BQ13224 1484 aa7.74□□□□□ -1.17
RNU6-709P-201ENST00000517257 CTTNBP2Q8WZ74 1663 aa7.73□□□□□ -1.17
RNU6-709P-201ENST00000517257 CEP162Q5TB80 1403 aa7.72□□□□□ -1.17
RNU6-709P-201ENST00000517257 ADAMTS12P58397 1594 aa7.71□□□□□ -1.17
RNU6-709P-201ENST00000517257 FHAD1B1AJZ9 1412 aa7.7□□□□□ -1.18
RNU6-709P-201ENST00000517257 CLIP1P30622 1438 aa7.69□□□□□ -1.18
RNU6-709P-201ENST00000517257 SNAPC4Q5SXM2 1469 aa7.68□□□□□ -1.18
RNU6-709P-201ENST00000517257 MAGI1Q96QZ7 1491 aaPredicted RBP7.68□□□□□ -1.18
RNU6-709P-201ENST00000517257 RANGAP1P46060 587 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms