RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 NISCHQ9Y2I1 1504 aa7.4□□□□□ -1.22
SCARNA20.6-201ENST00000517251 CCDC180Q9P1Z9 1646 aa6.56□□□□□ -1.36
SCARNA20.6-201ENST00000517251 ZCCHC6Q5VYS8 1495 aaKnown RBP6.34□□□□□ -1.4
SCARNA20.6-201ENST00000517251 DCAF1Q9Y4B6 1507 aa6.18□□□□□ -1.42
SCARNA20.6-201ENST00000517251 ABCC9O60706 1549 aa6.04□□□□□ -1.44
SCARNA20.6-201ENST00000517251 MYO15BQ96JP2 1530 aa6.03□□□□□ -1.44
SCARNA20.6-201ENST00000517251 UNC13AQ9UPW8 1703 aa5.98□□□□□ -1.45
SCARNA20.6-201ENST00000517251 SHROOM4Q9ULL8 1493 aa5.97□□□□□ -1.45
SCARNA20.6-201ENST00000517251 SCRIBQ14160 1630 aa5.93□□□□□ -1.46
SCARNA20.6-201ENST00000517251 NACADO15069 1562 aa5.89□□□□□ -1.47
SCARNA20.6-201ENST00000517251 EIF4G1Q04637 1599 aaKnown RBP5.88□□□□□ -1.47
SCARNA20.6-201ENST00000517251 RB1CC1Q8TDY2 1594 aa5.86□□□□□ -1.47
SCARNA20.6-201ENST00000517251 BAZ1AQ9NRL2 1556 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.6-201ENST00000517251 WIZO95785 1651 aa5.77□□□□□ -1.49
SCARNA20.6-201ENST00000517251 RSF1Q96T23 1441 aaPredicted RBP5.75□□□□□ -1.49
SCARNA20.6-201ENST00000517251 MROH2BQ7Z745 1585 aa5.75□□□□□ -1.49
SCARNA20.6-201ENST00000517251 BICRAQ9NZM4 1560 aa5.75□□□□□ -1.49
SCARNA20.6-201ENST00000517251 SMARCA4P51532 1647 aa5.74□□□□□ -1.49
SCARNA20.6-201ENST00000517251 CECR2Q9BXF3 1484 aa5.71□□□□□ -1.49
SCARNA20.6-201ENST00000517251 SUPT5HO00267 1087 aaKnown RBP5.7□□□□□ -1.5
SCARNA20.6-201ENST00000517251 PEG3Q9GZU2 1588 aa5.69□□□□□ -1.5
SCARNA20.6-201ENST00000517251 TOP2AP11388 1531 aaKnown RBP5.69□□□□□ -1.5
SCARNA20.6-201ENST00000517251 SMARCA2P51531 1590 aa5.67□□□□□ -1.5
SCARNA20.6-201ENST00000517251 CHIC1Q5VXU3 224 aa5.66□□□□□ -1.5
SCARNA20.6-201ENST00000517251 PRDM2Q13029 1718 aa5.64□□□□□ -1.51
SCARNA20.6-201ENST00000517251 DCAF8L2P0C7V8 631 aa5.6□□□□□ -1.51
SCARNA20.6-201ENST00000517251 ABCC8Q09428 1581 aa5.55□□□□□ -1.52
SCARNA20.6-201ENST00000517251 BIVM-ERCC5R4GMW8 1640 aa5.54□□□□□ -1.52
SCARNA20.6-201ENST00000517251 SYNJ1O43426 1573 aa5.53□□□□□ -1.52
SCARNA20.6-201ENST00000517251 CCDC88BA6NC98 1476 aa5.52□□□□□ -1.53
SCARNA20.6-201ENST00000517251 HMGXB3Q12766 1538 aa5.51□□□□□ -1.53
SCARNA20.6-201ENST00000517251 KIF21BO75037 1637 aa5.49□□□□□ -1.53
SCARNA20.6-201ENST00000517251 ATAD2BQ9ULI0 1458 aa5.47□□□□□ -1.53
SCARNA20.6-201ENST00000517251 TOP2BQ02880 1626 aa5.47□□□□□ -1.53
SCARNA20.6-201ENST00000517251 BAZ1BQ9UIG0 1483 aaKnown RBP5.43□□□□□ -1.54
SCARNA20.6-201ENST00000517251 WDR97A6NE52 1622 aa5.42□□□□□ -1.54
SCARNA20.6-201ENST00000517251 WRNQ14191 1432 aaPredicted RBP eCLIP5.4□□□□□ -1.55
SCARNA20.6-201ENST00000517251 RUSC2Q8N2Y8 1516 aa5.39□□□□□ -1.55
SCARNA20.6-201ENST00000517251 LOC105371045A0A1W2PR82 267 aa5.39□□□□□ -1.55
SCARNA20.6-201ENST00000517251 EEA1Q15075 1411 aa5.39□□□□□ -1.55
SCARNA20.6-201ENST00000517251 CUX1P39880 1505 aa5.38□□□□□ -1.55
SCARNA20.6-201ENST00000517251 HRCP23327 699 aa5.38□□□□□ -1.55
SCARNA20.6-201ENST00000517251 SOGA1O94964 1423 aa5.37□□□□□ -1.55
SCARNA20.6-201ENST00000517251 NCAPD3P42695 1498 aa5.37□□□□□ -1.55
SCARNA20.6-201ENST00000517251 ERICH3Q5RHP9 1530 aa5.37□□□□□ -1.55
SCARNA20.6-201ENST00000517251 GOLGA3Q08378 1498 aa5.36□□□□□ -1.55
SCARNA20.6-201ENST00000517251 CEP162Q5TB80 1403 aa5.35□□□□□ -1.55
SCARNA20.6-201ENST00000517251 CC2D2AQ9P2K1 1620 aa5.34□□□□□ -1.55
SCARNA20.6-201ENST00000517251 CFAP43Q8NDM7 1665 aa5.34□□□□□ -1.56
SCARNA20.6-201ENST00000517251 CTTNBP2Q8WZ74 1663 aa5.34□□□□□ -1.56
SCARNA20.6-201ENST00000517251 CEP164Q9UPV0 1460 aa5.33□□□□□ -1.56
SCARNA20.6-201ENST00000517251 TRIM41Q8WV44 630 aa5.33□□□□□ -1.56
SCARNA20.6-201ENST00000517251 CFTRP13569 1480 aa5.32□□□□□ -1.56
SCARNA20.6-201ENST00000517251 TNIKQ9UKE5 1360 aa5.31□□□□□ -1.56
SCARNA20.6-201ENST00000517251 PABPN1Q86U42 306 aaKnown RBP eCLIP5.31□□□□□ -1.56
SCARNA20.6-201ENST00000517251 LRRIQ1Q96JM4 1722 aa5.31□□□□□ -1.56
SCARNA20.6-201ENST00000517251 KIF21AQ7Z4S6 1674 aa5.31□□□□□ -1.56
SCARNA20.6-201ENST00000517251 PRXQ9BXM0 1461 aa5.3□□□□□ -1.56
SCARNA20.6-201ENST00000517251 RAPGEF2Q9Y4G8 1499 aa5.3□□□□□ -1.56
SCARNA20.6-201ENST00000517251 ARAP1Q96P48 1450 aa5.29□□□□□ -1.56
SCARNA20.6-201ENST00000517251 PCGF6Q9BYE7 350 aa5.29□□□□□ -1.56
SCARNA20.6-201ENST00000517251 ABCA5Q8WWZ7 1642 aa5.29□□□□□ -1.56
SCARNA20.6-201ENST00000517251 DNMBPQ6XZF7 1577 aa5.28□□□□□ -1.56
SCARNA20.6-201ENST00000517251 CUL7Q14999 1698 aa5.28□□□□□ -1.56
SCARNA20.6-201ENST00000517251 PBRM1Q86U86 1689 aa5.27□□□□□ -1.57
SCARNA20.6-201ENST00000517251 TRIM26Q12899 539 aaPredicted RBP5.26□□□□□ -1.57
SCARNA20.6-201ENST00000517251 VPS8Q8N3P4 1428 aa5.25□□□□□ -1.57
SCARNA20.6-201ENST00000517251 PCF11O94913 1555 aaKnown RBP5.25□□□□□ -1.57
SCARNA20.6-201ENST00000517251 LAMC3Q9Y6N6 1575 aa5.25□□□□□ -1.57
SCARNA20.6-201ENST00000517251 FAM9AQ8IZU1 332 aaPredicted RBP5.24□□□□□ -1.57
SCARNA20.6-201ENST00000517251 PPARGC1BQ86YN6 1023 aaKnown RBP5.23□□□□□ -1.57
SCARNA20.6-201ENST00000517251 FGD5Q6ZNL6 1462 aa5.23□□□□□ -1.57
SCARNA20.6-201ENST00000517251 TARBP1Q13395 1621 aaKnown RBP5.23□□□□□ -1.57
SCARNA20.6-201ENST00000517251 SAMD9Q5K651 1589 aa5.22□□□□□ -1.57
SCARNA20.6-201ENST00000517251 CLIP1P30622 1438 aa5.22□□□□□ -1.57
SCARNA20.6-201ENST00000517251 TIAM1Q13009 1591 aa5.21□□□□□ -1.57
SCARNA20.6-201ENST00000517251 ARHGAP35Q9NRY4 1499 aa5.21□□□□□ -1.58
SCARNA20.6-201ENST00000517251 TOPBP1Q92547 1522 aa5.21□□□□□ -1.58
SCARNA20.6-201ENST00000517251 ABCA10Q8WWZ4 1543 aa5.2□□□□□ -1.58
SCARNA20.6-201ENST00000517251 POLA1P09884 1462 aaPredicted RBP5.2□□□□□ -1.58
SCARNA20.6-201ENST00000517251 URB2Q14146 1524 aaKnown RBP5.19□□□□□ -1.58
SCARNA20.6-201ENST00000517251 FANCD2Q9BXW9 1451 aa5.19□□□□□ -1.58
SCARNA20.6-201ENST00000517251 NESP48681 1621 aa5.19□□□□□ -1.58
SCARNA20.6-201ENST00000517251 MAP3K1Q13233 1512 aa5.18□□□□□ -1.58
SCARNA20.6-201ENST00000517251 ADAMTS12P58397 1594 aa5.18□□□□□ -1.58
SCARNA20.6-201ENST00000517251 CSRNP3Q8WYN3 585 aa5.18□□□□□ -1.58
SCARNA20.6-201ENST00000517251 CUX2O14529 1486 aa5.18□□□□□ -1.58
SCARNA20.6-201ENST00000517251 EFCAB5A4FU69 1503 aa5.18□□□□□ -1.58
SCARNA20.6-201ENST00000517251 THOC2Q8NI27 1593 aaKnown RBP5.17□□□□□ -1.58
SCARNA20.6-201ENST00000517251 KIF27Q86VH2 1401 aa5.17□□□□□ -1.58
SCARNA20.6-201ENST00000517251 CADPSQ9ULU8 1353 aa5.16□□□□□ -1.58
SCARNA20.6-201ENST00000517251 RRBP1Q9P2E9 1410 aaKnown RBP5.15□□□□□ -1.58
SCARNA20.6-201ENST00000517251 SNAPC4Q5SXM2 1469 aa5.15□□□□□ -1.58
SCARNA20.6-201ENST00000517251 GCC2Q8IWJ2 1684 aa5.15□□□□□ -1.59
SCARNA20.6-201ENST00000517251 EHMT2Q96KQ7 1210 aa5.13□□□□□ -1.59
SCARNA20.6-201ENST00000517251 FYCO1Q9BQS8 1478 aa5.13□□□□□ -1.59
SCARNA20.6-201ENST00000517251 WDR62O43379 1518 aa5.13□□□□□ -1.59
SCARNA20.6-201ENST00000517251 EIF4G3O43432 1585 aaKnown RBP5.12□□□□□ -1.59
SCARNA20.6-201ENST00000517251 AQRO60306 1485 aaKnown RBP eCLIP5.12□□□□□ -1.59
SCARNA20.6-201ENST00000517251 RAD54L2Q9Y4B4 1467 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms