RNA–Protein interactions for RNA: ENST00000517018.1

RN7SKP11-201, Transcript of RNA, 7SK small nuclear pseudogene 11, humanhuman

BASIC

Gene RN7SKP11, Length 287 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP11-201ENST00000517018 NISCHQ9Y2I1 1504 aa16.98■□□□□ 0.31
RN7SKP11-201ENST00000517018 CCDC180Q9P1Z9 1646 aa14.95□□□□□ -0.02
RN7SKP11-201ENST00000517018 ABCC9O60706 1549 aa14.59□□□□□ -0.07
RN7SKP11-201ENST00000517018 ZCCHC6Q5VYS8 1495 aaKnown RBP14.15□□□□□ -0.14
RN7SKP11-201ENST00000517018 MYO15BQ96JP2 1530 aa14.15□□□□□ -0.14
RN7SKP11-201ENST00000517018 NACADO15069 1562 aa14.13□□□□□ -0.15
RN7SKP11-201ENST00000517018 DCAF1Q9Y4B6 1507 aa14.1□□□□□ -0.15
RN7SKP11-201ENST00000517018 DCAF8L2P0C7V8 631 aa14.08□□□□□ -0.16
RN7SKP11-201ENST00000517018 RB1CC1Q8TDY2 1594 aa14.06□□□□□ -0.16
RN7SKP11-201ENST00000517018 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
RN7SKP11-201ENST00000517018 BICRAQ9NZM4 1560 aa13.7□□□□□ -0.22
RN7SKP11-201ENST00000517018 UNC13AQ9UPW8 1703 aa13.66□□□□□ -0.22
RN7SKP11-201ENST00000517018 SCRIBQ14160 1630 aa13.62□□□□□ -0.23
RN7SKP11-201ENST00000517018 SHROOM4Q9ULL8 1493 aa13.59□□□□□ -0.23
RN7SKP11-201ENST00000517018 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
RN7SKP11-201ENST00000517018 EIF4G1Q04637 1599 aaKnown RBP13.29□□□□□ -0.28
RN7SKP11-201ENST00000517018 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
RN7SKP11-201ENST00000517018 CC2D2AQ9P2K1 1620 aa13.19□□□□□ -0.3
RN7SKP11-201ENST00000517018 BAZ1AQ9NRL2 1556 aaPredicted RBP13.11□□□□□ -0.31
RN7SKP11-201ENST00000517018 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
RN7SKP11-201ENST00000517018 SMARCA4P51532 1647 aa13.09□□□□□ -0.31
RN7SKP11-201ENST00000517018 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
RN7SKP11-201ENST00000517018 MROH2BQ7Z745 1585 aa13.07□□□□□ -0.32
RN7SKP11-201ENST00000517018 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
RN7SKP11-201ENST00000517018 SMARCA2P51531 1590 aa13.02□□□□□ -0.33
RN7SKP11-201ENST00000517018 RSF1Q96T23 1441 aaPredicted RBP13□□□□□ -0.33
RN7SKP11-201ENST00000517018 HMGXB3Q12766 1538 aa12.96□□□□□ -0.33
RN7SKP11-201ENST00000517018 BAZ1BQ9UIG0 1483 aaKnown RBP12.91□□□□□ -0.34
RN7SKP11-201ENST00000517018 WIZO95785 1651 aa12.86□□□□□ -0.35
RN7SKP11-201ENST00000517018 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
RN7SKP11-201ENST00000517018 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.37
RN7SKP11-201ENST00000517018 NESP48681 1621 aa12.67□□□□□ -0.38
RN7SKP11-201ENST00000517018 CCDC88BA6NC98 1476 aa12.66□□□□□ -0.38
RN7SKP11-201ENST00000517018 CFTRP13569 1480 aa12.65□□□□□ -0.38
RN7SKP11-201ENST00000517018 LAMC3Q9Y6N6 1575 aa12.64□□□□□ -0.39
RN7SKP11-201ENST00000517018 SUPT5HO00267 1087 aaKnown RBP12.63□□□□□ -0.39
RN7SKP11-201ENST00000517018 PDS5BQ9NTI5 1447 aa12.6□□□□□ -0.39
RN7SKP11-201ENST00000517018 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
RN7SKP11-201ENST00000517018 FANCD2Q9BXW9 1451 aa12.5□□□□□ -0.41
RN7SKP11-201ENST00000517018 CUX2O14529 1486 aa12.46□□□□□ -0.41
RN7SKP11-201ENST00000517018 MRC2Q9UBG0 1479 aa12.44□□□□□ -0.42
RN7SKP11-201ENST00000517018 CEP164Q9UPV0 1460 aa12.44□□□□□ -0.42
RN7SKP11-201ENST00000517018 THOC2Q8NI27 1593 aaKnown RBP12.43□□□□□ -0.42
RN7SKP11-201ENST00000517018 KIF21AQ7Z4S6 1674 aa12.42□□□□□ -0.42
RN7SKP11-201ENST00000517018 WDR62O43379 1518 aa12.4□□□□□ -0.42
RN7SKP11-201ENST00000517018 URB2Q14146 1524 aaKnown RBP12.38□□□□□ -0.43
RN7SKP11-201ENST00000517018 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
RN7SKP11-201ENST00000517018 ABCC8Q09428 1581 aa12.34□□□□□ -0.43
RN7SKP11-201ENST00000517018 TOPBP1Q92547 1522 aa12.31□□□□□ -0.44
RN7SKP11-201ENST00000517018 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
RN7SKP11-201ENST00000517018 CUX1P39880 1505 aa12.25□□□□□ -0.45
RN7SKP11-201ENST00000517018 IFT140Q96RY7 1462 aa12.23□□□□□ -0.45
RN7SKP11-201ENST00000517018 POLA1P09884 1462 aaPredicted RBP12.22□□□□□ -0.45
RN7SKP11-201ENST00000517018 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
RN7SKP11-201ENST00000517018 SOGA1O94964 1423 aa12.19□□□□□ -0.46
RN7SKP11-201ENST00000517018 FGD5Q6ZNL6 1462 aa12.17□□□□□ -0.46
RN7SKP11-201ENST00000517018 RAD54L2Q9Y4B4 1467 aa12.16□□□□□ -0.46
RN7SKP11-201ENST00000517018 ZNF608Q9ULD9 1512 aaPredicted RBP12.16□□□□□ -0.46
RN7SKP11-201ENST00000517018 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.46
RN7SKP11-201ENST00000517018 TOP2BQ02880 1626 aa12.13□□□□□ -0.47
RN7SKP11-201ENST00000517018 SYNJ1O43426 1573 aa12.11□□□□□ -0.47
RN7SKP11-201ENST00000517018 AQRO60306 1485 aaKnown RBP eCLIP12.11□□□□□ -0.47
RN7SKP11-201ENST00000517018 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
RN7SKP11-201ENST00000517018 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
RN7SKP11-201ENST00000517018 TDRD9Q8NDG6 1382 aaKnown RBP12.1□□□□□ -0.47
RN7SKP11-201ENST00000517018 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
RN7SKP11-201ENST00000517018 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
RN7SKP11-201ENST00000517018 GRIN2BQ13224 1484 aa12.02□□□□□ -0.48
RN7SKP11-201ENST00000517018 GAPVD1Q14C86 1478 aa12.02□□□□□ -0.48
RN7SKP11-201ENST00000517018 EIF4G3O43432 1585 aaKnown RBP12.02□□□□□ -0.49
RN7SKP11-201ENST00000517018 OSCARQ8IYS5 282 aa12□□□□□ -0.49
RN7SKP11-201ENST00000517018 ABCA5Q8WWZ7 1642 aa11.98□□□□□ -0.49
RN7SKP11-201ENST00000517018 MAGI1Q96QZ7 1491 aaPredicted RBP11.97□□□□□ -0.49
RN7SKP11-201ENST00000517018 IGF1RP08069 1367 aa11.97□□□□□ -0.49
RN7SKP11-201ENST00000517018 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
RN7SKP11-201ENST00000517018 SNAPC4Q5SXM2 1469 aa11.95□□□□□ -0.5
RN7SKP11-201ENST00000517018 KIF27Q86VH2 1401 aa11.95□□□□□ -0.5
RN7SKP11-201ENST00000517018 ERICH3Q5RHP9 1530 aa11.94□□□□□ -0.5
RN7SKP11-201ENST00000517018 CHIC1Q5VXU3 224 aa11.93□□□□□ -0.5
RN7SKP11-201ENST00000517018 SYNJ2O15056 1496 aa11.93□□□□□ -0.5
RN7SKP11-201ENST00000517018 CHMP7Q8WUX9 453 aaPredicted RBP11.92□□□□□ -0.5
RN7SKP11-201ENST00000517018 FHAD1B1AJZ9 1412 aa11.92□□□□□ -0.5
RN7SKP11-201ENST00000517018 FBLN2P98095 1184 aa11.88□□□□□ -0.51
RN7SKP11-201ENST00000517018 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
RN7SKP11-201ENST00000517018 CARMIL1Q5VZK9 1371 aa11.86□□□□□ -0.51
RN7SKP11-201ENST00000517018 PBRM1Q86U86 1689 aa11.86□□□□□ -0.51
RN7SKP11-201ENST00000517018 NUP160Q12769 1436 aa11.86□□□□□ -0.51
RN7SKP11-201ENST00000517018 ADAMTS12P58397 1594 aa11.85□□□□□ -0.51
RN7SKP11-201ENST00000517018 GRIN2AQ12879 1464 aa11.85□□□□□ -0.51
RN7SKP11-201ENST00000517018 CHD1O14646 1710 aa11.81□□□□□ -0.52
RN7SKP11-201ENST00000517018 CLASP1Q7Z460 1538 aa11.81□□□□□ -0.52
RN7SKP11-201ENST00000517018 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
RN7SKP11-201ENST00000517018 EEA1Q15075 1411 aa11.78□□□□□ -0.52
RN7SKP11-201ENST00000517018 PRXQ9BXM0 1461 aa11.78□□□□□ -0.52
RN7SKP11-201ENST00000517018 CUL7Q14999 1698 aa11.76□□□□□ -0.53
RN7SKP11-201ENST00000517018 RAPGEF2Q9Y4G8 1499 aa11.76□□□□□ -0.53
RN7SKP11-201ENST00000517018 CEP170Q5SW79 1584 aa11.75□□□□□ -0.53
RN7SKP11-201ENST00000517018 JPH4Q96JJ6 628 aa11.75□□□□□ -0.53
RN7SKP11-201ENST00000517018 KIAA0586Q9BVV6 1533 aa11.74□□□□□ -0.53
RN7SKP11-201ENST00000517018 ARHGEF11O15085 1522 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms