RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 NISCHQ9Y2I1 1504 aa3.32□□□□□ -1.88
RNU4ATAC11P-201ENST00000515939 DNAJC5BQ9UF47 199 aa3.14□□□□□ -1.91
RNU4ATAC11P-201ENST00000515939 ABCC9O60706 1549 aa3.13□□□□□ -1.91
RNU4ATAC11P-201ENST00000515939 CCDC180Q9P1Z9 1646 aa3.01□□□□□ -1.93
RNU4ATAC11P-201ENST00000515939 UNC13AQ9UPW8 1703 aa2.97□□□□□ -1.93
RNU4ATAC11P-201ENST00000515939 BICRAQ9NZM4 1560 aa2.92□□□□□ -1.94
RNU4ATAC11P-201ENST00000515939 PABPN1Q86U42 306 aaKnown RBP eCLIP2.9□□□□□ -1.95
RNU4ATAC11P-201ENST00000515939 RB1CC1Q8TDY2 1594 aa2.88□□□□□ -1.95
RNU4ATAC11P-201ENST00000515939 DNAJC5Q9H3Z4 198 aa2.87□□□□□ -1.95
RNU4ATAC11P-201ENST00000515939 NACADO15069 1562 aa2.85□□□□□ -1.95
RNU4ATAC11P-201ENST00000515939 CC2D2AQ9P2K1 1620 aa2.83□□□□□ -1.96
RNU4ATAC11P-201ENST00000515939 CECR2Q9BXF3 1484 aa2.8□□□□□ -1.96
RNU4ATAC11P-201ENST00000515939 EIF4G1Q04637 1599 aaKnown RBP2.79□□□□□ -1.96
RNU4ATAC11P-201ENST00000515939 MYO15BQ96JP2 1530 aa2.78□□□□□ -1.97
RNU4ATAC11P-201ENST00000515939 DCAF8L2P0C7V8 631 aa2.77□□□□□ -1.97
RNU4ATAC11P-201ENST00000515939 SCRIBQ14160 1630 aa2.75□□□□□ -1.97
RNU4ATAC11P-201ENST00000515939 ZCCHC6Q5VYS8 1495 aaKnown RBP2.72□□□□□ -1.97
RNU4ATAC11P-201ENST00000515939 DCAF1Q9Y4B6 1507 aa2.72□□□□□ -1.97
RNU4ATAC11P-201ENST00000515939 SHROOM4Q9ULL8 1493 aa2.71□□□□□ -1.97
RNU4ATAC11P-201ENST00000515939 NESP48681 1621 aa2.7□□□□□ -1.98
RNU4ATAC11P-201ENST00000515939 CUX2O14529 1486 aa2.69□□□□□ -1.98
RNU4ATAC11P-201ENST00000515939 THOC2Q8NI27 1593 aaKnown RBP2.68□□□□□ -1.98
RNU4ATAC11P-201ENST00000515939 KIF21AQ7Z4S6 1674 aa2.66□□□□□ -1.98
RNU4ATAC11P-201ENST00000515939 NCAPD3P42695 1498 aa2.65□□□□□ -1.98
RNU4ATAC11P-201ENST00000515939 TRIM41Q8WV44 630 aa2.65□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 ATAD2BQ9ULI0 1458 aa2.65□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 SMARCA4P51532 1647 aa2.62□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 ERCC6Q03468 1493 aa2.62□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 HMGXB3Q12766 1538 aa2.61□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 SMARCA2P51531 1590 aa2.61□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 PEG3Q9GZU2 1588 aa2.6□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 MROH2BQ7Z745 1585 aa2.59□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 BAZ1AQ9NRL2 1556 aaPredicted RBP2.59□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 LAMC3Q9Y6N6 1575 aa2.59□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 RIMBP3CA6NJZ7 1639 aa2.59□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 RIMBP3BA6NNM3 1639 aa2.59□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 RIMBP3Q9UFD9 1639 aa2.59□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 WDR62O43379 1518 aa2.58□□□□□ -2
RNU4ATAC11P-201ENST00000515939 MRC2Q9UBG0 1479 aa2.56□□□□□ -2
RNU4ATAC11P-201ENST00000515939 BAZ1BQ9UIG0 1483 aaKnown RBP2.56□□□□□ -2
RNU4ATAC11P-201ENST00000515939 URB2Q14146 1524 aaKnown RBP2.56□□□□□ -2
RNU4ATAC11P-201ENST00000515939 WIZO95785 1651 aa2.56□□□□□ -2
RNU4ATAC11P-201ENST00000515939 ZNF608Q9ULD9 1512 aaPredicted RBP2.55□□□□□ -2
RNU4ATAC11P-201ENST00000515939 CADPSQ9ULU8 1353 aa2.55□□□□□ -2
RNU4ATAC11P-201ENST00000515939 ARHGEF11O15085 1522 aa2.54□□□□□ -2
RNU4ATAC11P-201ENST00000515939 OSCARQ8IYS5 282 aa2.54□□□□□ -2
RNU4ATAC11P-201ENST00000515939 CHD1O14646 1710 aa2.54□□□□□ -2
RNU4ATAC11P-201ENST00000515939 ARAP1Q96P48 1450 aa2.53□□□□□ -2
RNU4ATAC11P-201ENST00000515939 PDS5BQ9NTI5 1447 aa2.53□□□□□ -2
RNU4ATAC11P-201ENST00000515939 PRDM2Q13029 1718 aa2.52□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 CFTRP13569 1480 aa2.52□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 FANCD2Q9BXW9 1451 aa2.52□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 TARBP1Q13395 1621 aaKnown RBP2.51□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 CYB5RLQ6IPT4 315 aa2.51□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 CEP164Q9UPV0 1460 aa2.51□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 KIF13AQ9H1H9 1805 aa2.5□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 EIF4G3O43432 1585 aaKnown RBP2.49□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 ERCC6L2Q5T890 1561 aa2.49□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 AQRO60306 1485 aaKnown RBP eCLIP2.49□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 CLASP1Q7Z460 1538 aa2.48□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 TOPBP1Q92547 1522 aa2.48□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 RSF1Q96T23 1441 aaPredicted RBP2.47□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 CCDC88BA6NC98 1476 aa2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 IFT140Q96RY7 1462 aa2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 RAD54L2Q9Y4B4 1467 aa2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 TRHP20396 242 aaPredicted RBP2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 ILDR1Q86SU0 546 aaPredicted RBP2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 TOP2AP11388 1531 aaKnown RBP2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 WDR97A6NE52 1622 aa2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 KDM4FA0A1W2PPD8 638 aa2.45□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 POLA1P09884 1462 aaPredicted RBP2.45□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 DNMBPQ6XZF7 1577 aa2.44□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 TDRD9Q8NDG6 1382 aaKnown RBP2.44□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 CUX1P39880 1505 aa2.43□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 AEBP2Q6ZN18 517 aaPredicted RBP2.43□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 GAPVD1Q14C86 1478 aa2.43□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 SNAPC4Q5SXM2 1469 aa2.43□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 PBRM1Q86U86 1689 aa2.43□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 TSPOAP1O95153 1857 aa2.43□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 PPRC1Q5VV67 1664 aaKnown RBP2.42□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 CEP170Q5SW79 1584 aa2.42□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 SHROOM2Q13796 1616 aa2.42□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 FGD5Q6ZNL6 1462 aa2.41□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 FBLN2P98095 1184 aa2.41□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 ABCA5Q8WWZ7 1642 aa2.41□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 SOGA1O94964 1423 aa2.41□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 COL17A1Q9UMD9 1497 aaPredicted RBP2.4□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 NUP160Q12769 1436 aa2.4□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 SYNJ1O43426 1573 aa2.4□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 ABCC8Q09428 1581 aa2.4□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 DIP2BQ9P265 1576 aa2.4□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 SYNJ2O15056 1496 aa2.39□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 MAGI1Q96QZ7 1491 aaPredicted RBP2.39□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 ADCY10Q96PN6 1610 aa2.39□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 GRIN2BQ13224 1484 aa2.39□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 ADAMTS12P58397 1594 aa2.38□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 GRIN2AQ12879 1464 aa2.38□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 ABCC10Q5T3U5 1492 aa2.38□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 ABCA10Q8WWZ4 1543 aa2.37□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 HECW2Q9P2P5 1572 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms