RNA–Protein interactions for RNA: ENST00000515234.1

SPATA4-203, Transcript of spermatogenesis associated 4, humanhuman

TSL 1 (best) BASIC

Gene SPATA4, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA4-203ENST00000515234 NISCHQ9Y2I1 1504 aa27.08■■□□□ 1.93
SPATA4-203ENST00000515234 AEBP2Q6ZN18 517 aaPredicted RBP25.33■■□□□ 1.64
SPATA4-203ENST00000515234 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
SPATA4-203ENST00000515234 CCDC180Q9P1Z9 1646 aa23.68■■□□□ 1.38
SPATA4-203ENST00000515234 ZCCHC6Q5VYS8 1495 aaKnown RBP22.74■■□□□ 1.23
SPATA4-203ENST00000515234 ABCC9O60706 1549 aa22.52■■□□□ 1.2
SPATA4-203ENST00000515234 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
SPATA4-203ENST00000515234 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
SPATA4-203ENST00000515234 SHROOM4Q9ULL8 1493 aa22.16■■□□□ 1.14
SPATA4-203ENST00000515234 MYO15BQ96JP2 1530 aa22.09■■□□□ 1.13
SPATA4-203ENST00000515234 NACADO15069 1562 aa22.05■■□□□ 1.12
SPATA4-203ENST00000515234 PHF23Q9BUL5 403 aaPredicted RBP22■■□□□ 1.11
SPATA4-203ENST00000515234 RB1CC1Q8TDY2 1594 aa21.92■■□□□ 1.1
SPATA4-203ENST00000515234 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
SPATA4-203ENST00000515234 UNC13AQ9UPW8 1703 aa21.51■■□□□ 1.03
SPATA4-203ENST00000515234 SENP3Q9H4L4 574 aaPredicted RBP21.34■■□□□ 1.01
SPATA4-203ENST00000515234 SUPT5HO00267 1087 aaKnown RBP21.26■□□□□ 0.99
SPATA4-203ENST00000515234 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
SPATA4-203ENST00000515234 PABPN1Q86U42 306 aaKnown RBP eCLIP21.22■□□□□ 0.99
SPATA4-203ENST00000515234 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
SPATA4-203ENST00000515234 RSF1Q96T23 1441 aaPredicted RBP20.97■□□□□ 0.95
SPATA4-203ENST00000515234 MROH2BQ7Z745 1585 aa20.94■□□□□ 0.94
SPATA4-203ENST00000515234 BAZ1AQ9NRL2 1556 aaPredicted RBP20.94■□□□□ 0.94
SPATA4-203ENST00000515234 SMARCA4P51532 1647 aa20.87■□□□□ 0.93
SPATA4-203ENST00000515234 WIZO95785 1651 aa20.81■□□□□ 0.92
SPATA4-203ENST00000515234 EIF4G1Q04637 1599 aaKnown RBP20.62■□□□□ 0.89
SPATA4-203ENST00000515234 PEG3Q9GZU2 1588 aa20.56■□□□□ 0.88
SPATA4-203ENST00000515234 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
SPATA4-203ENST00000515234 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
SPATA4-203ENST00000515234 ATAD2BQ9ULI0 1458 aa20.51■□□□□ 0.87
SPATA4-203ENST00000515234 BAZ1BQ9UIG0 1483 aaKnown RBP20.45■□□□□ 0.86
SPATA4-203ENST00000515234 CC2D2AQ9P2K1 1620 aa20.36■□□□□ 0.85
SPATA4-203ENST00000515234 CCDC88BA6NC98 1476 aa20.33■□□□□ 0.85
SPATA4-203ENST00000515234 HMGXB3Q12766 1538 aa20.33■□□□□ 0.84
SPATA4-203ENST00000515234 NCAPD3P42695 1498 aa20.32■□□□□ 0.84
SPATA4-203ENST00000515234 PLPPR3Q6T4P5 718 aa20.31■□□□□ 0.84
SPATA4-203ENST00000515234 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
SPATA4-203ENST00000515234 ABCC8Q09428 1581 aa19.94■□□□□ 0.78
SPATA4-203ENST00000515234 CFTRP13569 1480 aa19.87■□□□□ 0.77
SPATA4-203ENST00000515234 DNAJC5BQ9UF47 199 aa19.87■□□□□ 0.77
SPATA4-203ENST00000515234 FOXD1Q16676 465 aa19.85■□□□□ 0.77
SPATA4-203ENST00000515234 PRDM2Q13029 1718 aa19.84■□□□□ 0.77
SPATA4-203ENST00000515234 CADPSQ9ULU8 1353 aa19.82■□□□□ 0.76
SPATA4-203ENST00000515234 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
SPATA4-203ENST00000515234 NESP48681 1621 aa19.73■□□□□ 0.75
SPATA4-203ENST00000515234 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
SPATA4-203ENST00000515234 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
SPATA4-203ENST00000515234 FAM9AQ8IZU1 332 aaPredicted RBP19.66■□□□□ 0.74
SPATA4-203ENST00000515234 FANCD2Q9BXW9 1451 aa19.65■□□□□ 0.74
SPATA4-203ENST00000515234 TOP2BQ02880 1626 aa19.63■□□□□ 0.73
SPATA4-203ENST00000515234 BIVM-ERCC5R4GMW8 1640 aa19.61■□□□□ 0.73
SPATA4-203ENST00000515234 CUX1P39880 1505 aa19.59■□□□□ 0.73
SPATA4-203ENST00000515234 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
SPATA4-203ENST00000515234 PDS5BQ9NTI5 1447 aa19.54■□□□□ 0.72
SPATA4-203ENST00000515234 KIF21AQ7Z4S6 1674 aa19.52■□□□□ 0.72
SPATA4-203ENST00000515234 SOGA1O94964 1423 aa19.51■□□□□ 0.71
SPATA4-203ENST00000515234 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
SPATA4-203ENST00000515234 DNMBPQ6XZF7 1577 aa19.45■□□□□ 0.7
SPATA4-203ENST00000515234 EHMT2Q96KQ7 1210 aa19.44■□□□□ 0.7
SPATA4-203ENST00000515234 RUSC2Q8N2Y8 1516 aa19.44■□□□□ 0.7
SPATA4-203ENST00000515234 TOPBP1Q92547 1522 aa19.42■□□□□ 0.7
SPATA4-203ENST00000515234 EEA1Q15075 1411 aa19.42■□□□□ 0.7
SPATA4-203ENST00000515234 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
SPATA4-203ENST00000515234 URB2Q14146 1524 aaKnown RBP19.39■□□□□ 0.7
SPATA4-203ENST00000515234 ERCC6Q03468 1493 aa19.35■□□□□ 0.69
SPATA4-203ENST00000515234 PPP6R1Q9UPN7 881 aa19.34■□□□□ 0.69
SPATA4-203ENST00000515234 CSRNP3Q8WYN3 585 aa19.33■□□□□ 0.69
SPATA4-203ENST00000515234 ADRA2BP18089 450 aa19.32■□□□□ 0.68
SPATA4-203ENST00000515234 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
SPATA4-203ENST00000515234 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
SPATA4-203ENST00000515234 KIF27Q86VH2 1401 aa19.28■□□□□ 0.68
SPATA4-203ENST00000515234 CUX2O14529 1486 aa19.28■□□□□ 0.68
SPATA4-203ENST00000515234 RAD54L2Q9Y4B4 1467 aa19.27■□□□□ 0.67
SPATA4-203ENST00000515234 KIF21BO75037 1637 aa19.21■□□□□ 0.67
SPATA4-203ENST00000515234 WDR62O43379 1518 aa19.2■□□□□ 0.66
SPATA4-203ENST00000515234 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
SPATA4-203ENST00000515234 GOLGA3Q08378 1498 aa19.2■□□□□ 0.66
SPATA4-203ENST00000515234 THOC2Q8NI27 1593 aaKnown RBP19.18■□□□□ 0.66
SPATA4-203ENST00000515234 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
SPATA4-203ENST00000515234 UBTFP17480 764 aaKnown RBP19.15■□□□□ 0.66
SPATA4-203ENST00000515234 RAPGEF2Q9Y4G8 1499 aa19.13■□□□□ 0.65
SPATA4-203ENST00000515234 TARBP1Q13395 1621 aaKnown RBP19.12■□□□□ 0.65
SPATA4-203ENST00000515234 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
SPATA4-203ENST00000515234 TDRD9Q8NDG6 1382 aaKnown RBP19.09■□□□□ 0.65
SPATA4-203ENST00000515234 ABCA5Q8WWZ7 1642 aa19.08■□□□□ 0.64
SPATA4-203ENST00000515234 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
SPATA4-203ENST00000515234 IGF1RP08069 1367 aa19.07■□□□□ 0.64
SPATA4-203ENST00000515234 TNIKQ9UKE5 1360 aa19.07■□□□□ 0.64
SPATA4-203ENST00000515234 GAPVD1Q14C86 1478 aa19.04■□□□□ 0.64
SPATA4-203ENST00000515234 IFT140Q96RY7 1462 aa19.04■□□□□ 0.64
SPATA4-203ENST00000515234 CEP162Q5TB80 1403 aa19.02■□□□□ 0.64
SPATA4-203ENST00000515234 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
SPATA4-203ENST00000515234 CUL7Q14999 1698 aa19■□□□□ 0.63
SPATA4-203ENST00000515234 PBRM1Q86U86 1689 aa18.99■□□□□ 0.63
SPATA4-203ENST00000515234 AQRO60306 1485 aaKnown RBP eCLIP18.98■□□□□ 0.63
SPATA4-203ENST00000515234 ZNF608Q9ULD9 1512 aaPredicted RBP18.97■□□□□ 0.63
SPATA4-203ENST00000515234 RANGAP1P46060 587 aaPredicted RBP18.94■□□□□ 0.62
SPATA4-203ENST00000515234 EIF4G3O43432 1585 aaKnown RBP18.94■□□□□ 0.62
SPATA4-203ENST00000515234 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
SPATA4-203ENST00000515234 CLIP1P30622 1438 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms