RNA–Protein interactions for RNA: ENST00000515070.1

ABCC3-215, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-215ENST00000515070 NISCHQ9Y2I1 1504 aa21.07■□□□□ 0.96
ABCC3-215ENST00000515070 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
ABCC3-215ENST00000515070 ABCC9O60706 1549 aa18.18■□□□□ 0.5
ABCC3-215ENST00000515070 NACADO15069 1562 aa17.61■□□□□ 0.41
ABCC3-215ENST00000515070 MYO15BQ96JP2 1530 aa17.59■□□□□ 0.41
ABCC3-215ENST00000515070 DCAF8L2P0C7V8 631 aa17.59■□□□□ 0.41
ABCC3-215ENST00000515070 RB1CC1Q8TDY2 1594 aa17.58■□□□□ 0.41
ABCC3-215ENST00000515070 ZCCHC6Q5VYS8 1495 aaKnown RBP17.55■□□□□ 0.4
ABCC3-215ENST00000515070 DCAF1Q9Y4B6 1507 aa17.5■□□□□ 0.39
ABCC3-215ENST00000515070 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
ABCC3-215ENST00000515070 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
ABCC3-215ENST00000515070 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
ABCC3-215ENST00000515070 SCRIBQ14160 1630 aa16.96■□□□□ 0.31
ABCC3-215ENST00000515070 BICRAQ9NZM4 1560 aa16.96■□□□□ 0.31
ABCC3-215ENST00000515070 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
ABCC3-215ENST00000515070 EIF4G1Q04637 1599 aaKnown RBP16.55■□□□□ 0.24
ABCC3-215ENST00000515070 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
ABCC3-215ENST00000515070 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
ABCC3-215ENST00000515070 BAZ1AQ9NRL2 1556 aaPredicted RBP16.34■□□□□ 0.21
ABCC3-215ENST00000515070 SMARCA4P51532 1647 aa16.28■□□□□ 0.2
ABCC3-215ENST00000515070 NCAPD3P42695 1498 aa16.27■□□□□ 0.19
ABCC3-215ENST00000515070 SMARCA2P51531 1590 aa16.25■□□□□ 0.19
ABCC3-215ENST00000515070 ATAD2BQ9ULI0 1458 aa16.24■□□□□ 0.19
ABCC3-215ENST00000515070 PEG3Q9GZU2 1588 aa16.19■□□□□ 0.18
ABCC3-215ENST00000515070 MROH2BQ7Z745 1585 aa16.17■□□□□ 0.18
ABCC3-215ENST00000515070 HMGXB3Q12766 1538 aa16.15■□□□□ 0.18
ABCC3-215ENST00000515070 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
ABCC3-215ENST00000515070 RSF1Q96T23 1441 aaPredicted RBP16.08■□□□□ 0.16
ABCC3-215ENST00000515070 WIZO95785 1651 aa15.95■□□□□ 0.14
ABCC3-215ENST00000515070 TOP2AP11388 1531 aaKnown RBP15.88■□□□□ 0.13
ABCC3-215ENST00000515070 CADPSQ9ULU8 1353 aa15.8■□□□□ 0.12
ABCC3-215ENST00000515070 LAMC3Q9Y6N6 1575 aa15.79■□□□□ 0.12
ABCC3-215ENST00000515070 PDS5BQ9NTI5 1447 aa15.75■□□□□ 0.11
ABCC3-215ENST00000515070 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
ABCC3-215ENST00000515070 NESP48681 1621 aa15.72■□□□□ 0.11
ABCC3-215ENST00000515070 SUPT5HO00267 1087 aaKnown RBP15.7■□□□□ 0.1
ABCC3-215ENST00000515070 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
ABCC3-215ENST00000515070 CFTRP13569 1480 aa15.7■□□□□ 0.1
ABCC3-215ENST00000515070 CUX2O14529 1486 aa15.58■□□□□ 0.08
ABCC3-215ENST00000515070 FANCD2Q9BXW9 1451 aa15.57■□□□□ 0.08
ABCC3-215ENST00000515070 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
ABCC3-215ENST00000515070 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
ABCC3-215ENST00000515070 KIF21AQ7Z4S6 1674 aa15.49■□□□□ 0.07
ABCC3-215ENST00000515070 THOC2Q8NI27 1593 aaKnown RBP15.47■□□□□ 0.07
ABCC3-215ENST00000515070 PRDM2Q13029 1718 aa15.44■□□□□ 0.06
ABCC3-215ENST00000515070 WDR62O43379 1518 aa15.43■□□□□ 0.06
ABCC3-215ENST00000515070 ABCC8Q09428 1581 aa15.42■□□□□ 0.06
ABCC3-215ENST00000515070 URB2Q14146 1524 aaKnown RBP15.36■□□□□ 0.05
ABCC3-215ENST00000515070 TOPBP1Q92547 1522 aa15.3■□□□□ 0.04
ABCC3-215ENST00000515070 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
ABCC3-215ENST00000515070 IFT140Q96RY7 1462 aa15.25■□□□□ 0.03
ABCC3-215ENST00000515070 POLA1P09884 1462 aaPredicted RBP15.18■□□□□ 0.02
ABCC3-215ENST00000515070 WRNQ14191 1432 aaPredicted RBP eCLIP15.17■□□□□ 0.02
ABCC3-215ENST00000515070 CUX1P39880 1505 aa15.17■□□□□ 0.02
ABCC3-215ENST00000515070 SOGA1O94964 1423 aa15.17■□□□□ 0.02
ABCC3-215ENST00000515070 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
ABCC3-215ENST00000515070 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
ABCC3-215ENST00000515070 WDR97A6NE52 1622 aa15.09■□□□□ 0.01
ABCC3-215ENST00000515070 TOP2BQ02880 1626 aa15.09■□□□□ 0.01
ABCC3-215ENST00000515070 RAD54L2Q9Y4B4 1467 aa15.08■□□□□ 0
ABCC3-215ENST00000515070 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
ABCC3-215ENST00000515070 BIVM-ERCC5R4GMW8 1640 aa15.06■□□□□ 0
ABCC3-215ENST00000515070 ABCA10Q8WWZ4 1543 aa15.04■□□□□ -0
ABCC3-215ENST00000515070 TDRD9Q8NDG6 1382 aaKnown RBP15.04■□□□□ -0
ABCC3-215ENST00000515070 DNAJC5Q9H3Z4 198 aa15.04■□□□□ -0
ABCC3-215ENST00000515070 AQRO60306 1485 aaKnown RBP eCLIP15.03■□□□□ -0
ABCC3-215ENST00000515070 SYNJ1O43426 1573 aa15.02■□□□□ -0
ABCC3-215ENST00000515070 EIF4G3O43432 1585 aaKnown RBP15□□□□□ -0.01
ABCC3-215ENST00000515070 OSCARQ8IYS5 282 aa14.99□□□□□ -0.01
ABCC3-215ENST00000515070 GRIN2BQ13224 1484 aa14.98□□□□□ -0.01
ABCC3-215ENST00000515070 GAPVD1Q14C86 1478 aa14.98□□□□□ -0.01
ABCC3-215ENST00000515070 MAGI1Q96QZ7 1491 aaPredicted RBP14.95□□□□□ -0.02
ABCC3-215ENST00000515070 CHMP7Q8WUX9 453 aaPredicted RBP14.91□□□□□ -0.02
ABCC3-215ENST00000515070 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
ABCC3-215ENST00000515070 ABCA5Q8WWZ7 1642 aa14.9□□□□□ -0.02
ABCC3-215ENST00000515070 SNAPC4Q5SXM2 1469 aa14.89□□□□□ -0.03
ABCC3-215ENST00000515070 FBLN2P98095 1184 aa14.89□□□□□ -0.03
ABCC3-215ENST00000515070 KIF27Q86VH2 1401 aa14.89□□□□□ -0.03
ABCC3-215ENST00000515070 SYNJ2O15056 1496 aa14.88□□□□□ -0.03
ABCC3-215ENST00000515070 ERICH3Q5RHP9 1530 aa14.87□□□□□ -0.03
ABCC3-215ENST00000515070 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.03
ABCC3-215ENST00000515070 PBRM1Q86U86 1689 aa14.81□□□□□ -0.04
ABCC3-215ENST00000515070 IGF1RP08069 1367 aa14.81□□□□□ -0.04
ABCC3-215ENST00000515070 GRIN2AQ12879 1464 aa14.76□□□□□ -0.05
ABCC3-215ENST00000515070 ADAMTS12P58397 1594 aa14.75□□□□□ -0.05
ABCC3-215ENST00000515070 CHD1O14646 1710 aa14.75□□□□□ -0.05
ABCC3-215ENST00000515070 CARMIL1Q5VZK9 1371 aa14.73□□□□□ -0.05
ABCC3-215ENST00000515070 CHIC1Q5VXU3 224 aa14.71□□□□□ -0.05
ABCC3-215ENST00000515070 NUP160Q12769 1436 aa14.71□□□□□ -0.05
ABCC3-215ENST00000515070 CUL7Q14999 1698 aa14.71□□□□□ -0.06
ABCC3-215ENST00000515070 EEA1Q15075 1411 aa14.69□□□□□ -0.06
ABCC3-215ENST00000515070 CLASP1Q7Z460 1538 aa14.67□□□□□ -0.06
ABCC3-215ENST00000515070 CSRNP3Q8WYN3 585 aa14.64□□□□□ -0.07
ABCC3-215ENST00000515070 RAPGEF2Q9Y4G8 1499 aa14.63□□□□□ -0.07
ABCC3-215ENST00000515070 ARHGEF11O15085 1522 aa14.63□□□□□ -0.07
ABCC3-215ENST00000515070 RUSC2Q8N2Y8 1516 aa14.63□□□□□ -0.07
ABCC3-215ENST00000515070 KIAA0586Q9BVV6 1533 aa14.61□□□□□ -0.07
ABCC3-215ENST00000515070 CEP170Q5SW79 1584 aa14.61□□□□□ -0.07
ABCC3-215ENST00000515070 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
ABCC3-215ENST00000515070 PRXQ9BXM0 1461 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms