RNA–Protein interactions for RNA: ENST00000514517.1

PPARGC1A-214, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 3

Gene PPARGC1A, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-214ENST00000514517 NISCHQ9Y2I1 1504 aa23.38■■□□□ 1.33
PPARGC1A-214ENST00000514517 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
PPARGC1A-214ENST00000514517 ABCC9O60706 1549 aa19.86■□□□□ 0.77
PPARGC1A-214ENST00000514517 DCAF8L2P0C7V8 631 aa19.56■□□□□ 0.72
PPARGC1A-214ENST00000514517 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
PPARGC1A-214ENST00000514517 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
PPARGC1A-214ENST00000514517 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
PPARGC1A-214ENST00000514517 NACADO15069 1562 aa19.31■□□□□ 0.68
PPARGC1A-214ENST00000514517 RB1CC1Q8TDY2 1594 aa19.23■□□□□ 0.67
PPARGC1A-214ENST00000514517 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
PPARGC1A-214ENST00000514517 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
PPARGC1A-214ENST00000514517 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.59
PPARGC1A-214ENST00000514517 PABPN1Q86U42 306 aaKnown RBP eCLIP18.71■□□□□ 0.59
PPARGC1A-214ENST00000514517 BICRAQ9NZM4 1560 aa18.58■□□□□ 0.56
PPARGC1A-214ENST00000514517 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
PPARGC1A-214ENST00000514517 CECR2Q9BXF3 1484 aa18.18■□□□□ 0.5
PPARGC1A-214ENST00000514517 EIF4G1Q04637 1599 aaKnown RBP18.1■□□□□ 0.49
PPARGC1A-214ENST00000514517 BAZ1AQ9NRL2 1556 aaPredicted RBP18.09■□□□□ 0.49
PPARGC1A-214ENST00000514517 MROH2BQ7Z745 1585 aa18.01■□□□□ 0.47
PPARGC1A-214ENST00000514517 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
PPARGC1A-214ENST00000514517 RSF1Q96T23 1441 aaPredicted RBP18■□□□□ 0.47
PPARGC1A-214ENST00000514517 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
PPARGC1A-214ENST00000514517 CC2D2AQ9P2K1 1620 aa17.91■□□□□ 0.46
PPARGC1A-214ENST00000514517 ATAD2BQ9ULI0 1458 aa17.91■□□□□ 0.46
PPARGC1A-214ENST00000514517 SUPT5HO00267 1087 aaKnown RBP17.9■□□□□ 0.46
PPARGC1A-214ENST00000514517 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
PPARGC1A-214ENST00000514517 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
PPARGC1A-214ENST00000514517 CHIC1Q5VXU3 224 aa17.85■□□□□ 0.45
PPARGC1A-214ENST00000514517 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
PPARGC1A-214ENST00000514517 BAZ1BQ9UIG0 1483 aaKnown RBP17.78■□□□□ 0.44
PPARGC1A-214ENST00000514517 WIZO95785 1651 aa17.77■□□□□ 0.43
PPARGC1A-214ENST00000514517 HMGXB3Q12766 1538 aa17.73■□□□□ 0.43
PPARGC1A-214ENST00000514517 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
PPARGC1A-214ENST00000514517 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
PPARGC1A-214ENST00000514517 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
PPARGC1A-214ENST00000514517 CFTRP13569 1480 aa17.31■□□□□ 0.36
PPARGC1A-214ENST00000514517 NESP48681 1621 aa17.27■□□□□ 0.36
PPARGC1A-214ENST00000514517 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
PPARGC1A-214ENST00000514517 PDS5BQ9NTI5 1447 aa17.24■□□□□ 0.35
PPARGC1A-214ENST00000514517 FANCD2Q9BXW9 1451 aa17.15■□□□□ 0.34
PPARGC1A-214ENST00000514517 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
PPARGC1A-214ENST00000514517 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
PPARGC1A-214ENST00000514517 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
PPARGC1A-214ENST00000514517 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
PPARGC1A-214ENST00000514517 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
PPARGC1A-214ENST00000514517 ABCC8Q09428 1581 aa16.96■□□□□ 0.31
PPARGC1A-214ENST00000514517 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
PPARGC1A-214ENST00000514517 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
PPARGC1A-214ENST00000514517 TRIM41Q8WV44 630 aa16.91■□□□□ 0.3
PPARGC1A-214ENST00000514517 CUX1P39880 1505 aa16.88■□□□□ 0.29
PPARGC1A-214ENST00000514517 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
PPARGC1A-214ENST00000514517 WDR62O43379 1518 aa16.87■□□□□ 0.29
PPARGC1A-214ENST00000514517 DNMBPQ6XZF7 1577 aa16.87■□□□□ 0.29
PPARGC1A-214ENST00000514517 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
PPARGC1A-214ENST00000514517 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
PPARGC1A-214ENST00000514517 TOP2BQ02880 1626 aa16.8■□□□□ 0.28
PPARGC1A-214ENST00000514517 CUX2O14529 1486 aa16.79■□□□□ 0.28
PPARGC1A-214ENST00000514517 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
PPARGC1A-214ENST00000514517 SOGA1O94964 1423 aa16.78■□□□□ 0.28
PPARGC1A-214ENST00000514517 POLA1P09884 1462 aaPredicted RBP16.77■□□□□ 0.28
PPARGC1A-214ENST00000514517 BIVM-ERCC5R4GMW8 1640 aa16.74■□□□□ 0.27
PPARGC1A-214ENST00000514517 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
PPARGC1A-214ENST00000514517 RAD54L2Q9Y4B4 1467 aa16.72■□□□□ 0.27
PPARGC1A-214ENST00000514517 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
PPARGC1A-214ENST00000514517 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.26
PPARGC1A-214ENST00000514517 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
PPARGC1A-214ENST00000514517 TARBP1Q13395 1621 aaKnown RBP16.61■□□□□ 0.25
PPARGC1A-214ENST00000514517 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.25
PPARGC1A-214ENST00000514517 ZNF608Q9ULD9 1512 aaPredicted RBP16.59■□□□□ 0.25
PPARGC1A-214ENST00000514517 GAPVD1Q14C86 1478 aa16.56■□□□□ 0.24
PPARGC1A-214ENST00000514517 EEA1Q15075 1411 aa16.53■□□□□ 0.24
PPARGC1A-214ENST00000514517 FAM9AQ8IZU1 332 aaPredicted RBP16.53■□□□□ 0.24
PPARGC1A-214ENST00000514517 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
PPARGC1A-214ENST00000514517 WDR97A6NE52 1622 aa16.52■□□□□ 0.23
PPARGC1A-214ENST00000514517 GRIN2BQ13224 1484 aa16.51■□□□□ 0.23
PPARGC1A-214ENST00000514517 IGF1RP08069 1367 aa16.51■□□□□ 0.23
PPARGC1A-214ENST00000514517 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
PPARGC1A-214ENST00000514517 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
PPARGC1A-214ENST00000514517 EIF4G3O43432 1585 aaKnown RBP16.46■□□□□ 0.23
PPARGC1A-214ENST00000514517 ERICH3Q5RHP9 1530 aa16.44■□□□□ 0.22
PPARGC1A-214ENST00000514517 CARMIL1Q5VZK9 1371 aa16.42■□□□□ 0.22
PPARGC1A-214ENST00000514517 CHMP7Q8WUX9 453 aaPredicted RBP16.41■□□□□ 0.22
PPARGC1A-214ENST00000514517 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
PPARGC1A-214ENST00000514517 MAGI1Q96QZ7 1491 aaPredicted RBP16.41■□□□□ 0.22
PPARGC1A-214ENST00000514517 FHAD1B1AJZ9 1412 aa16.4■□□□□ 0.22
PPARGC1A-214ENST00000514517 FBLN2P98095 1184 aa16.4■□□□□ 0.22
PPARGC1A-214ENST00000514517 SYNJ2O15056 1496 aa16.35■□□□□ 0.21
PPARGC1A-214ENST00000514517 PRXQ9BXM0 1461 aa16.35■□□□□ 0.21
PPARGC1A-214ENST00000514517 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.2
PPARGC1A-214ENST00000514517 RAPGEF2Q9Y4G8 1499 aa16.33■□□□□ 0.2
PPARGC1A-214ENST00000514517 PBRM1Q86U86 1689 aa16.32■□□□□ 0.2
PPARGC1A-214ENST00000514517 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
PPARGC1A-214ENST00000514517 CUL7Q14999 1698 aa16.3■□□□□ 0.2
PPARGC1A-214ENST00000514517 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
PPARGC1A-214ENST00000514517 GRIN2AQ12879 1464 aa16.28■□□□□ 0.2
PPARGC1A-214ENST00000514517 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
PPARGC1A-214ENST00000514517 UBTFP17480 764 aaKnown RBP16.26■□□□□ 0.19
PPARGC1A-214ENST00000514517 GOLGA3Q08378 1498 aa16.24■□□□□ 0.19
PPARGC1A-214ENST00000514517 LOC105371045A0A1W2PR82 267 aa16.22■□□□□ 0.19
PPARGC1A-214ENST00000514517 KIF21BO75037 1637 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms