RNA–Protein interactions for RNA: ENST00000514121.5

SPOP-219, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 4

Gene SPOP, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-219ENST00000514121 NISCHQ9Y2I1 1504 aa33.67■■■□□ 2.98
SPOP-219ENST00000514121 CCDC180Q9P1Z9 1646 aa29.69■■■□□ 2.34
SPOP-219ENST00000514121 ABCC9O60706 1549 aa28.97■■■□□ 2.23
SPOP-219ENST00000514121 DCAF8L2P0C7V8 631 aa28.26■■■□□ 2.11
SPOP-219ENST00000514121 ZCCHC6Q5VYS8 1495 aaKnown RBP28.06■■■□□ 2.08
SPOP-219ENST00000514121 NACADO15069 1562 aa27.95■■■□□ 2.07
SPOP-219ENST00000514121 RB1CC1Q8TDY2 1594 aa27.91■■■□□ 2.06
SPOP-219ENST00000514121 MYO15BQ96JP2 1530 aa27.84■■■□□ 2.05
SPOP-219ENST00000514121 DCAF1Q9Y4B6 1507 aa27.82■■■□□ 2.04
SPOP-219ENST00000514121 PABPN1Q86U42 306 aaKnown RBP eCLIP27.21■■□□□ 1.95
SPOP-219ENST00000514121 SCRIBQ14160 1630 aa27.19■■□□□ 1.94
SPOP-219ENST00000514121 UNC13AQ9UPW8 1703 aa27.15■■□□□ 1.94
SPOP-219ENST00000514121 BICRAQ9NZM4 1560 aa27.01■■□□□ 1.92
SPOP-219ENST00000514121 SHROOM4Q9ULL8 1493 aa26.88■■□□□ 1.89
SPOP-219ENST00000514121 DNAJC5BQ9UF47 199 aa26.42■■□□□ 1.82
SPOP-219ENST00000514121 EIF4G1Q04637 1599 aaKnown RBP26.3■■□□□ 1.8
SPOP-219ENST00000514121 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
SPOP-219ENST00000514121 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.78
SPOP-219ENST00000514121 BAZ1AQ9NRL2 1556 aaPredicted RBP26.06■■□□□ 1.76
SPOP-219ENST00000514121 SMARCA4P51532 1647 aa26.01■■□□□ 1.75
SPOP-219ENST00000514121 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.75
SPOP-219ENST00000514121 ATAD2BQ9ULI0 1458 aa25.88■■□□□ 1.73
SPOP-219ENST00000514121 NCAPD3P42695 1498 aa25.84■■□□□ 1.73
SPOP-219ENST00000514121 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
SPOP-219ENST00000514121 RSF1Q96T23 1441 aaPredicted RBP25.8■■□□□ 1.72
SPOP-219ENST00000514121 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
SPOP-219ENST00000514121 BAZ1BQ9UIG0 1483 aaKnown RBP25.67■■□□□ 1.7
SPOP-219ENST00000514121 WIZO95785 1651 aa25.65■■□□□ 1.7
SPOP-219ENST00000514121 HMGXB3Q12766 1538 aa25.65■■□□□ 1.7
SPOP-219ENST00000514121 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
SPOP-219ENST00000514121 TOP2AP11388 1531 aaKnown RBP25.4■■□□□ 1.66
SPOP-219ENST00000514121 CCDC88BA6NC98 1476 aa25.17■■□□□ 1.62
SPOP-219ENST00000514121 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
SPOP-219ENST00000514121 NESP48681 1621 aa25.12■■□□□ 1.61
SPOP-219ENST00000514121 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
SPOP-219ENST00000514121 CFTRP13569 1480 aa24.99■■□□□ 1.59
SPOP-219ENST00000514121 PDS5BQ9NTI5 1447 aa24.96■■□□□ 1.59
SPOP-219ENST00000514121 ERCC6Q03468 1493 aa24.96■■□□□ 1.59
SPOP-219ENST00000514121 FANCD2Q9BXW9 1451 aa24.81■■□□□ 1.56
SPOP-219ENST00000514121 CEP164Q9UPV0 1460 aa24.74■■□□□ 1.55
SPOP-219ENST00000514121 KIF21AQ7Z4S6 1674 aa24.72■■□□□ 1.55
SPOP-219ENST00000514121 PRDM2Q13029 1718 aa24.64■■□□□ 1.54
SPOP-219ENST00000514121 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.53
SPOP-219ENST00000514121 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
SPOP-219ENST00000514121 CUX2O14529 1486 aa24.54■■□□□ 1.52
SPOP-219ENST00000514121 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
SPOP-219ENST00000514121 WDR62O43379 1518 aa24.5■■□□□ 1.51
SPOP-219ENST00000514121 ABCC8Q09428 1581 aa24.46■■□□□ 1.51
SPOP-219ENST00000514121 TOPBP1Q92547 1522 aa24.42■■□□□ 1.5
SPOP-219ENST00000514121 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
SPOP-219ENST00000514121 CUX1P39880 1505 aa24.32■■□□□ 1.48
SPOP-219ENST00000514121 WRNQ14191 1432 aaPredicted RBP eCLIP24.32■■□□□ 1.48
SPOP-219ENST00000514121 POLA1P09884 1462 aaPredicted RBP24.23■■□□□ 1.47
SPOP-219ENST00000514121 FGD5Q6ZNL6 1462 aa24.22■■□□□ 1.47
SPOP-219ENST00000514121 SOGA1O94964 1423 aa24.22■■□□□ 1.47
SPOP-219ENST00000514121 IFT140Q96RY7 1462 aa24.21■■□□□ 1.47
SPOP-219ENST00000514121 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
SPOP-219ENST00000514121 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
SPOP-219ENST00000514121 TOP2BQ02880 1626 aa24.15■■□□□ 1.46
SPOP-219ENST00000514121 BIVM-ERCC5R4GMW8 1640 aa24.11■■□□□ 1.45
SPOP-219ENST00000514121 ZNF608Q9ULD9 1512 aaPredicted RBP24.08■■□□□ 1.45
SPOP-219ENST00000514121 TARBP1Q13395 1621 aaKnown RBP24.07■■□□□ 1.44
SPOP-219ENST00000514121 TRIM41Q8WV44 630 aa24.06■■□□□ 1.44
SPOP-219ENST00000514121 TDRD9Q8NDG6 1382 aaKnown RBP24.05■■□□□ 1.44
SPOP-219ENST00000514121 AQRO60306 1485 aaKnown RBP eCLIP24.03■■□□□ 1.441e-6■■■■■ 27.6
SPOP-219ENST00000514121 ABCA10Q8WWZ4 1543 aa23.99■■□□□ 1.43
SPOP-219ENST00000514121 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
SPOP-219ENST00000514121 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
SPOP-219ENST00000514121 GAPVD1Q14C86 1478 aa23.89■■□□□ 1.42
SPOP-219ENST00000514121 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
SPOP-219ENST00000514121 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
SPOP-219ENST00000514121 KIF27Q86VH2 1401 aa23.81■■□□□ 1.4
SPOP-219ENST00000514121 FBLN2P98095 1184 aa23.8■■□□□ 1.4
SPOP-219ENST00000514121 ABCA5Q8WWZ7 1642 aa23.79■■□□□ 1.4
SPOP-219ENST00000514121 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
SPOP-219ENST00000514121 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
SPOP-219ENST00000514121 MAGI1Q96QZ7 1491 aaPredicted RBP23.73■■□□□ 1.39
SPOP-219ENST00000514121 OSCARQ8IYS5 282 aa23.72■■□□□ 1.39
SPOP-219ENST00000514121 IGF1RP08069 1367 aa23.71■■□□□ 1.39
SPOP-219ENST00000514121 ERICH3Q5RHP9 1530 aa23.69■■□□□ 1.38
SPOP-219ENST00000514121 PBRM1Q86U86 1689 aa23.69■■□□□ 1.38
SPOP-219ENST00000514121 RUSC2Q8N2Y8 1516 aa23.67■■□□□ 1.38
SPOP-219ENST00000514121 SYNJ2O15056 1496 aa23.64■■□□□ 1.38
SPOP-219ENST00000514121 FHAD1B1AJZ9 1412 aa23.64■■□□□ 1.37
SPOP-219ENST00000514121 DNAJC5Q9H3Z4 198 aa23.6■■□□□ 1.37
SPOP-219ENST00000514121 CARMIL1Q5VZK9 1371 aa23.58■■□□□ 1.37
SPOP-219ENST00000514121 FAM9AQ8IZU1 332 aaPredicted RBP23.57■■□□□ 1.36
SPOP-219ENST00000514121 CSRNP3Q8WYN3 585 aa23.56■■□□□ 1.36
SPOP-219ENST00000514121 ADAMTS12P58397 1594 aa23.56■■□□□ 1.36
SPOP-219ENST00000514121 CHD1O14646 1710 aa23.54■■□□□ 1.36
SPOP-219ENST00000514121 GRIN2AQ12879 1464 aa23.52■■□□□ 1.36
SPOP-219ENST00000514121 EEA1Q15075 1411 aa23.51■■□□□ 1.35
SPOP-219ENST00000514121 CUL7Q14999 1698 aa23.48■■□□□ 1.35
SPOP-219ENST00000514121 RAPGEF2Q9Y4G8 1499 aa23.43■■□□□ 1.34
SPOP-219ENST00000514121 NUP160Q12769 1436 aa23.4■■□□□ 1.34
SPOP-219ENST00000514121 PRXQ9BXM0 1461 aa23.38■■□□□ 1.33
SPOP-219ENST00000514121 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
SPOP-219ENST00000514121 CLASP1Q7Z460 1538 aa23.33■■□□□ 1.32
SPOP-219ENST00000514121 JPH4Q96JJ6 628 aa23.31■■□□□ 1.32
SPOP-219ENST00000514121 KIAA0586Q9BVV6 1533 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms