RNA–Protein interactions for RNA: ENST00000513952.5

TMEM175-216, Transcript of transmembrane protein 175, humanhuman

TSL 1 (best)

Gene TMEM175, Length 2,084 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM175-216ENST00000513952 NISCHQ9Y2I1 1504 aa36.85■■■■□ 3.49
TMEM175-216ENST00000513952 CCDC180Q9P1Z9 1646 aa32.22■■■□□ 2.75
TMEM175-216ENST00000513952 ABCC9O60706 1549 aa30.91■■■□□ 2.54
TMEM175-216ENST00000513952 ZCCHC6Q5VYS8 1495 aaKnown RBP30.88■■■□□ 2.53
TMEM175-216ENST00000513952 DCAF8L2P0C7V8 631 aa30.58■■■□□ 2.49
TMEM175-216ENST00000513952 DCAF1Q9Y4B6 1507 aa30.38■■■□□ 2.45
TMEM175-216ENST00000513952 MYO15BQ96JP2 1530 aa30.12■■■□□ 2.41
TMEM175-216ENST00000513952 NACADO15069 1562 aa30.08■■■□□ 2.41
TMEM175-216ENST00000513952 SHROOM4Q9ULL8 1493 aa29.91■■■□□ 2.38
TMEM175-216ENST00000513952 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
TMEM175-216ENST00000513952 SCRIBQ14160 1630 aa29.69■■■□□ 2.34
TMEM175-216ENST00000513952 UNC13AQ9UPW8 1703 aa29.52■■■□□ 2.32
TMEM175-216ENST00000513952 BICRAQ9NZM4 1560 aa29.18■■■□□ 2.26
TMEM175-216ENST00000513952 PABPN1Q86U42 306 aaKnown RBP eCLIP29.13■■■□□ 2.25
TMEM175-216ENST00000513952 CECR2Q9BXF3 1484 aa28.77■■■□□ 2.2
TMEM175-216ENST00000513952 SUPT5HO00267 1087 aaKnown RBP28.55■■■□□ 2.16
TMEM175-216ENST00000513952 MROH2BQ7Z745 1585 aa28.53■■■□□ 2.16
TMEM175-216ENST00000513952 RSF1Q96T23 1441 aaPredicted RBP28.48■■■□□ 2.15
TMEM175-216ENST00000513952 BAZ1AQ9NRL2 1556 aaPredicted RBP28.41■■■□□ 2.14
TMEM175-216ENST00000513952 SMARCA4P51532 1647 aa28.41■■■□□ 2.14
TMEM175-216ENST00000513952 WIZO95785 1651 aa28.3■■■□□ 2.12
TMEM175-216ENST00000513952 EIF4G1Q04637 1599 aaKnown RBP28.25■■■□□ 2.11
TMEM175-216ENST00000513952 PEG3Q9GZU2 1588 aa28.04■■■□□ 2.08
TMEM175-216ENST00000513952 ATAD2BQ9ULI0 1458 aa28.03■■■□□ 2.08
TMEM175-216ENST00000513952 CHIC1Q5VXU3 224 aa28.01■■■□□ 2.07
TMEM175-216ENST00000513952 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.07
TMEM175-216ENST00000513952 SMARCA2P51531 1590 aa27.91■■■□□ 2.06
TMEM175-216ENST00000513952 TOP2AP11388 1531 aaKnown RBP27.87■■■□□ 2.05
TMEM175-216ENST00000513952 NCAPD3P42695 1498 aa27.81■■■□□ 2.04
TMEM175-216ENST00000513952 BAZ1BQ9UIG0 1483 aaKnown RBP27.79■■■□□ 2.04
TMEM175-216ENST00000513952 DNAJC5BQ9UF47 199 aa27.74■■■□□ 2.03
TMEM175-216ENST00000513952 HMGXB3Q12766 1538 aa27.71■■■□□ 2.03
TMEM175-216ENST00000513952 CCDC88BA6NC98 1476 aa27.65■■■□□ 2.02
TMEM175-216ENST00000513952 HRCP23327 699 aa27.63■■■□□ 2.01
TMEM175-216ENST00000513952 PCGF6Q9BYE7 350 aa27.25■■□□□ 1.95
TMEM175-216ENST00000513952 CFTRP13569 1480 aa27.11■■□□□ 1.93
TMEM175-216ENST00000513952 NESP48681 1621 aa27.09■■□□□ 1.93
TMEM175-216ENST00000513952 CADPSQ9ULU8 1353 aa27.07■■□□□ 1.92
TMEM175-216ENST00000513952 LOC105371045A0A1W2PR82 267 aa27.01■■□□□ 1.91
TMEM175-216ENST00000513952 ABCC8Q09428 1581 aa27.01■■□□□ 1.91
TMEM175-216ENST00000513952 PRDM2Q13029 1718 aa26.96■■□□□ 1.91
TMEM175-216ENST00000513952 TRIM26Q12899 539 aaPredicted RBP26.89■■□□□ 1.89
TMEM175-216ENST00000513952 LAMC3Q9Y6N6 1575 aa26.89■■□□□ 1.89
TMEM175-216ENST00000513952 FANCD2Q9BXW9 1451 aa26.78■■□□□ 1.88
TMEM175-216ENST00000513952 TRIM41Q8WV44 630 aa26.78■■□□□ 1.88
TMEM175-216ENST00000513952 SYNJ1O43426 1573 aa26.76■■□□□ 1.87
TMEM175-216ENST00000513952 WRNQ14191 1432 aaPredicted RBP eCLIP26.75■■□□□ 1.87
TMEM175-216ENST00000513952 PPARGC1BQ86YN6 1023 aaKnown RBP26.74■■□□□ 1.87
TMEM175-216ENST00000513952 KIF21AQ7Z4S6 1674 aa26.74■■□□□ 1.87
TMEM175-216ENST00000513952 CUX1P39880 1505 aa26.67■■□□□ 1.86
TMEM175-216ENST00000513952 PDS5BQ9NTI5 1447 aa26.65■■□□□ 1.86
TMEM175-216ENST00000513952 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
TMEM175-216ENST00000513952 TOP2BQ02880 1626 aa26.6■■□□□ 1.85
TMEM175-216ENST00000513952 BIVM-ERCC5R4GMW8 1640 aa26.59■■□□□ 1.85
TMEM175-216ENST00000513952 ZEB1P37275 1124 aaPredicted RBP26.55■■□□□ 1.84
TMEM175-216ENST00000513952 URB2Q14146 1524 aaKnown RBP26.53■■□□□ 1.84
TMEM175-216ENST00000513952 TOPBP1Q92547 1522 aa26.48■■□□□ 1.83
TMEM175-216ENST00000513952 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
TMEM175-216ENST00000513952 SOGA1O94964 1423 aa26.42■■□□□ 1.82
TMEM175-216ENST00000513952 ERCC6Q03468 1493 aa26.41■■□□□ 1.82
TMEM175-216ENST00000513952 RUSC2Q8N2Y8 1516 aa26.41■■□□□ 1.82
TMEM175-216ENST00000513952 FAM9AQ8IZU1 332 aaPredicted RBP26.4■■□□□ 1.82
TMEM175-216ENST00000513952 FGD5Q6ZNL6 1462 aa26.4■■□□□ 1.82
TMEM175-216ENST00000513952 MRC2Q9UBG0 1479 aa26.38■■□□□ 1.81
TMEM175-216ENST00000513952 THOC2Q8NI27 1593 aaKnown RBP26.34■■□□□ 1.81
TMEM175-216ENST00000513952 POLA1P09884 1462 aaPredicted RBP26.33■■□□□ 1.81
TMEM175-216ENST00000513952 RAD54L2Q9Y4B4 1467 aa26.3■■□□□ 1.8
TMEM175-216ENST00000513952 WDR62O43379 1518 aa26.28■■□□□ 1.8
TMEM175-216ENST00000513952 CUX2O14529 1486 aa26.2■■□□□ 1.78
TMEM175-216ENST00000513952 TARBP1Q13395 1621 aaKnown RBP26.15■■□□□ 1.78
TMEM175-216ENST00000513952 WDR97A6NE52 1622 aa26.14■■□□□ 1.78
TMEM175-216ENST00000513952 ABCA10Q8WWZ4 1543 aa26.12■■□□□ 1.77
TMEM175-216ENST00000513952 EHMT2Q96KQ7 1210 aa26.11■■□□□ 1.77
TMEM175-216ENST00000513952 CSRNP3Q8WYN3 585 aa26.08■■□□□ 1.77
TMEM175-216ENST00000513952 EEA1Q15075 1411 aa26.05■■□□□ 1.76
TMEM175-216ENST00000513952 KIF27Q86VH2 1401 aa26.05■■□□□ 1.76
TMEM175-216ENST00000513952 TDRD9Q8NDG6 1382 aaKnown RBP26.05■■□□□ 1.76
TMEM175-216ENST00000513952 ZNF608Q9ULD9 1512 aaPredicted RBP26■■□□□ 1.75
TMEM175-216ENST00000513952 IFT140Q96RY7 1462 aa25.98■■□□□ 1.75
TMEM175-216ENST00000513952 ABCA5Q8WWZ7 1642 aa25.98■■□□□ 1.75
TMEM175-216ENST00000513952 IGF1RP08069 1367 aa25.98■■□□□ 1.75
TMEM175-216ENST00000513952 AQRO60306 1485 aaKnown RBP eCLIP25.96■■□□□ 1.752e-7■■■□□ 15
TMEM175-216ENST00000513952 GAPVD1Q14C86 1478 aa25.9■■□□□ 1.74
TMEM175-216ENST00000513952 PRXQ9BXM0 1461 aa25.88■■□□□ 1.73
TMEM175-216ENST00000513952 RAPGEF2Q9Y4G8 1499 aa25.87■■□□□ 1.73
TMEM175-216ENST00000513952 KIF21BO75037 1637 aa25.85■■□□□ 1.73
TMEM175-216ENST00000513952 PBRM1Q86U86 1689 aa25.84■■□□□ 1.73
TMEM175-216ENST00000513952 EIF4G3O43432 1585 aaKnown RBP25.84■■□□□ 1.73
TMEM175-216ENST00000513952 CARMIL1Q5VZK9 1371 aa25.79■■□□□ 1.72
TMEM175-216ENST00000513952 ERICH3Q5RHP9 1530 aa25.77■■□□□ 1.72
TMEM175-216ENST00000513952 GOLGA3Q08378 1498 aa25.76■■□□□ 1.71
TMEM175-216ENST00000513952 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
TMEM175-216ENST00000513952 UBTFP17480 764 aaKnown RBP25.7■■□□□ 1.7
TMEM175-216ENST00000513952 CUL7Q14999 1698 aa25.7■■□□□ 1.7
TMEM175-216ENST00000513952 TNIKQ9UKE5 1360 aa25.68■■□□□ 1.7
TMEM175-216ENST00000513952 SNAPC4Q5SXM2 1469 aa25.65■■□□□ 1.7
TMEM175-216ENST00000513952 CEP162Q5TB80 1403 aa25.64■■□□□ 1.7
TMEM175-216ENST00000513952 ADAMTS12P58397 1594 aa25.64■■□□□ 1.69
TMEM175-216ENST00000513952 PELP1Q8IZL8 1130 aaKnown RBP25.6■■□□□ 1.69
TMEM175-216ENST00000513952 FHAD1B1AJZ9 1412 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms