RNA–Protein interactions for RNA: ENST00000513646.1

SLC1A3-212, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-212ENST00000513646 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
SLC1A3-212ENST00000513646 ABCC9O60706 1549 aa19■□□□□ 0.63
SLC1A3-212ENST00000513646 NISCHQ9Y2I1 1504 aa18.91■□□□□ 0.62
SLC1A3-212ENST00000513646 DNAJC5Q9H3Z4 198 aa18.47■□□□□ 0.55
SLC1A3-212ENST00000513646 CCDC180Q9P1Z9 1646 aa17.53■□□□□ 0.4
SLC1A3-212ENST00000513646 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
SLC1A3-212ENST00000513646 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
SLC1A3-212ENST00000513646 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
SLC1A3-212ENST00000513646 TRIM41Q8WV44 630 aa17.22■□□□□ 0.35
SLC1A3-212ENST00000513646 CC2D2AQ9P2K1 1620 aa17.04■□□□□ 0.32
SLC1A3-212ENST00000513646 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
SLC1A3-212ENST00000513646 NACADO15069 1562 aa16.92■□□□□ 0.3
SLC1A3-212ENST00000513646 BICRAQ9NZM4 1560 aa16.92■□□□□ 0.3
SLC1A3-212ENST00000513646 CUX2O14529 1486 aa16.87■□□□□ 0.29
SLC1A3-212ENST00000513646 DCAF8L2P0C7V8 631 aa16.77■□□□□ 0.28
SLC1A3-212ENST00000513646 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
SLC1A3-212ENST00000513646 AEBP2Q6ZN18 517 aaPredicted RBP16.6■□□□□ 0.25
SLC1A3-212ENST00000513646 ERCC6Q03468 1493 aa16.52■□□□□ 0.23
SLC1A3-212ENST00000513646 SHROOM4Q9ULL8 1493 aa16.49■□□□□ 0.23
SLC1A3-212ENST00000513646 MYO15BQ96JP2 1530 aa16.16■□□□□ 0.18
SLC1A3-212ENST00000513646 ILDR1Q86SU0 546 aaPredicted RBP16.13■□□□□ 0.17
SLC1A3-212ENST00000513646 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
SLC1A3-212ENST00000513646 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
SLC1A3-212ENST00000513646 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
SLC1A3-212ENST00000513646 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
SLC1A3-212ENST00000513646 NESP48681 1621 aa15.91■□□□□ 0.14
SLC1A3-212ENST00000513646 BAZ1AQ9NRL2 1556 aaPredicted RBP15.86■□□□□ 0.13
SLC1A3-212ENST00000513646 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
SLC1A3-212ENST00000513646 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
SLC1A3-212ENST00000513646 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
SLC1A3-212ENST00000513646 SMARCA2P51531 1590 aa15.82■□□□□ 0.12
SLC1A3-212ENST00000513646 CYB5RLQ6IPT4 315 aa15.7■□□□□ 0.1
SLC1A3-212ENST00000513646 ARHGEF11O15085 1522 aa15.65■□□□□ 0.1
SLC1A3-212ENST00000513646 NCAPD3P42695 1498 aa15.64■□□□□ 0.09
SLC1A3-212ENST00000513646 KIF21AQ7Z4S6 1674 aa15.63■□□□□ 0.09
SLC1A3-212ENST00000513646 PDS5BQ9NTI5 1447 aa15.52■□□□□ 0.08
SLC1A3-212ENST00000513646 LAMC3Q9Y6N6 1575 aa15.52■□□□□ 0.07
SLC1A3-212ENST00000513646 DCAF1Q9Y4B6 1507 aa15.46■□□□□ 0.07
SLC1A3-212ENST00000513646 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.06
SLC1A3-212ENST00000513646 WDR62O43379 1518 aa15.43■□□□□ 0.06
SLC1A3-212ENST00000513646 ATAD2BQ9ULI0 1458 aa15.42■□□□□ 0.06
SLC1A3-212ENST00000513646 ARAP1Q96P48 1450 aa15.41■□□□□ 0.06
SLC1A3-212ENST00000513646 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
SLC1A3-212ENST00000513646 ZCCHC6Q5VYS8 1495 aaKnown RBP15.36■□□□□ 0.05
SLC1A3-212ENST00000513646 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
SLC1A3-212ENST00000513646 LMTK3Q96Q04 1460 aa15.22■□□□□ 0.03
SLC1A3-212ENST00000513646 FBXO41Q8TF61 875 aa15.15■□□□□ 0.02
SLC1A3-212ENST00000513646 CADPSQ9ULU8 1353 aa15.14■□□□□ 0.01
SLC1A3-212ENST00000513646 KDM4FA0A1W2PPD8 638 aa15.14■□□□□ 0.01
SLC1A3-212ENST00000513646 SOCS7O14512 581 aa15.14■□□□□ 0.01
SLC1A3-212ENST00000513646 CEP164Q9UPV0 1460 aa15.14■□□□□ 0.01
SLC1A3-212ENST00000513646 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
SLC1A3-212ENST00000513646 SMARCA4P51532 1647 aa15.06■□□□□ 0
SLC1A3-212ENST00000513646 ERCC6L2Q5T890 1561 aa15.04■□□□□ -0
SLC1A3-212ENST00000513646 ILDR2Q71H61 639 aa15.01□□□□□ -0.01
SLC1A3-212ENST00000513646 ZNF608Q9ULD9 1512 aaPredicted RBP15.01□□□□□ -0.01
SLC1A3-212ENST00000513646 FBLN2P98095 1184 aa14.99□□□□□ -0.01
SLC1A3-212ENST00000513646 CHD1O14646 1710 aa14.99□□□□□ -0.01
SLC1A3-212ENST00000513646 FANCD2Q9BXW9 1451 aa14.99□□□□□ -0.01
SLC1A3-212ENST00000513646 URB2Q14146 1524 aaKnown RBP14.94□□□□□ -0.02
SLC1A3-212ENST00000513646 HECW2Q9P2P5 1572 aa14.93□□□□□ -0.02
SLC1A3-212ENST00000513646 DISP3Q9P2K9 1392 aa14.87□□□□□ -0.03
SLC1A3-212ENST00000513646 IFT140Q96RY7 1462 aa14.86□□□□□ -0.03
SLC1A3-212ENST00000513646 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
SLC1A3-212ENST00000513646 EIF4G3O43432 1585 aaKnown RBP14.82□□□□□ -0.04
SLC1A3-212ENST00000513646 SYNJ2O15056 1496 aa14.77□□□□□ -0.04
SLC1A3-212ENST00000513646 GAPVD1Q14C86 1478 aa14.76□□□□□ -0.05
SLC1A3-212ENST00000513646 KIF13AQ9H1H9 1805 aa14.75□□□□□ -0.05
SLC1A3-212ENST00000513646 CLASP1Q7Z460 1538 aa14.74□□□□□ -0.05
SLC1A3-212ENST00000513646 AQRO60306 1485 aaKnown RBP eCLIP14.71□□□□□ -0.05
SLC1A3-212ENST00000513646 ADGRL1O94910 1474 aa14.69□□□□□ -0.06
SLC1A3-212ENST00000513646 KDM6BO15054 1643 aa14.68□□□□□ -0.06
SLC1A3-212ENST00000513646 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
SLC1A3-212ENST00000513646 CFTRP13569 1480 aa14.64□□□□□ -0.07
SLC1A3-212ENST00000513646 FAM69CQ0P6D2 419 aa14.62□□□□□ -0.07
SLC1A3-212ENST00000513646 CHMP7Q8WUX9 453 aaPredicted RBP14.6□□□□□ -0.07
SLC1A3-212ENST00000513646 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
SLC1A3-212ENST00000513646 TOPBP1Q92547 1522 aa14.53□□□□□ -0.08
SLC1A3-212ENST00000513646 SPATA31D1Q6ZQQ2 1576 aa14.52□□□□□ -0.08
SLC1A3-212ENST00000513646 SNAPC4Q5SXM2 1469 aa14.51□□□□□ -0.09
SLC1A3-212ENST00000513646 CHIC1Q5VXU3 224 aa14.51□□□□□ -0.09
SLC1A3-212ENST00000513646 ABCC10Q5T3U5 1492 aa14.48□□□□□ -0.09
SLC1A3-212ENST00000513646 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
SLC1A3-212ENST00000513646 TSPOAP1O95153 1857 aa14.45□□□□□ -0.1
SLC1A3-212ENST00000513646 TDRD9Q8NDG6 1382 aaKnown RBP14.42□□□□□ -0.1
SLC1A3-212ENST00000513646 DIP2BQ9P265 1576 aa14.39□□□□□ -0.11
SLC1A3-212ENST00000513646 ABCC8Q09428 1581 aa14.38□□□□□ -0.11
SLC1A3-212ENST00000513646 MAGI1Q96QZ7 1491 aaPredicted RBP14.37□□□□□ -0.11
SLC1A3-212ENST00000513646 PRDM2Q13029 1718 aa14.36□□□□□ -0.11
SLC1A3-212ENST00000513646 WIZO95785 1651 aa14.36□□□□□ -0.11
SLC1A3-212ENST00000513646 NPM1P06748 294 aaKnown RBP eCLIP14.35□□□□□ -0.11
SLC1A3-212ENST00000513646 DNMBPQ6XZF7 1577 aa14.34□□□□□ -0.11
SLC1A3-212ENST00000513646 CERKQ8TCT0 537 aa14.34□□□□□ -0.11
SLC1A3-212ENST00000513646 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
SLC1A3-212ENST00000513646 POLA1P09884 1462 aaPredicted RBP14.3□□□□□ -0.12
SLC1A3-212ENST00000513646 MAPKBP1O60336 1514 aa14.28□□□□□ -0.12
SLC1A3-212ENST00000513646 TOP2BQ02880 1626 aa14.27□□□□□ -0.12
SLC1A3-212ENST00000513646 CEP170Q5SW79 1584 aa14.27□□□□□ -0.12
SLC1A3-212ENST00000513646 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
SLC1A3-212ENST00000513646 SOGA1O94964 1423 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms