RNA–Protein interactions for RNA: ENST00000513369.2

GAPDHP35-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 35, humanhuman

BASIC

Gene GAPDHP35, Length 976 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP35-201ENST00000513369 NISCHQ9Y2I1 1504 aa21.2■□□□□ 0.98
GAPDHP35-201ENST00000513369 CCDC180Q9P1Z9 1646 aa18.77■□□□□ 0.6
GAPDHP35-201ENST00000513369 ABCC9O60706 1549 aa18.18■□□□□ 0.5
GAPDHP35-201ENST00000513369 ZCCHC6Q5VYS8 1495 aaKnown RBP17.71■□□□□ 0.43
GAPDHP35-201ENST00000513369 NACADO15069 1562 aa17.59■□□□□ 0.41
GAPDHP35-201ENST00000513369 DCAF8L2P0C7V8 631 aa17.59■□□□□ 0.41
GAPDHP35-201ENST00000513369 RB1CC1Q8TDY2 1594 aa17.56■□□□□ 0.4
GAPDHP35-201ENST00000513369 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
GAPDHP35-201ENST00000513369 DCAF1Q9Y4B6 1507 aa17.56■□□□□ 0.4
GAPDHP35-201ENST00000513369 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
GAPDHP35-201ENST00000513369 SCRIBQ14160 1630 aa17.14■□□□□ 0.33
GAPDHP35-201ENST00000513369 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
GAPDHP35-201ENST00000513369 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
GAPDHP35-201ENST00000513369 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
GAPDHP35-201ENST00000513369 EIF4G1Q04637 1599 aaKnown RBP16.57■□□□□ 0.24
GAPDHP35-201ENST00000513369 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
GAPDHP35-201ENST00000513369 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.23
GAPDHP35-201ENST00000513369 CC2D2AQ9P2K1 1620 aa16.46■□□□□ 0.23
GAPDHP35-201ENST00000513369 BAZ1AQ9NRL2 1556 aaPredicted RBP16.42■□□□□ 0.22
GAPDHP35-201ENST00000513369 SMARCA4P51532 1647 aa16.41■□□□□ 0.22
GAPDHP35-201ENST00000513369 MROH2BQ7Z745 1585 aa16.35■□□□□ 0.21
GAPDHP35-201ENST00000513369 ATAD2BQ9ULI0 1458 aa16.28■□□□□ 0.2
GAPDHP35-201ENST00000513369 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
GAPDHP35-201ENST00000513369 SMARCA2P51531 1590 aa16.25■□□□□ 0.19
GAPDHP35-201ENST00000513369 NCAPD3P42695 1498 aa16.24■□□□□ 0.19
GAPDHP35-201ENST00000513369 RSF1Q96T23 1441 aaPredicted RBP16.22■□□□□ 0.19
GAPDHP35-201ENST00000513369 WIZO95785 1651 aa16.19■□□□□ 0.18
GAPDHP35-201ENST00000513369 HMGXB3Q12766 1538 aa16.18■□□□□ 0.18
GAPDHP35-201ENST00000513369 BAZ1BQ9UIG0 1483 aaKnown RBP16.14■□□□□ 0.17
GAPDHP35-201ENST00000513369 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
GAPDHP35-201ENST00000513369 SUPT5HO00267 1087 aaKnown RBP15.93■□□□□ 0.14
GAPDHP35-201ENST00000513369 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
GAPDHP35-201ENST00000513369 NESP48681 1621 aa15.8■□□□□ 0.12
GAPDHP35-201ENST00000513369 LAMC3Q9Y6N6 1575 aa15.77■□□□□ 0.11
GAPDHP35-201ENST00000513369 CADPSQ9ULU8 1353 aa15.76■□□□□ 0.11
GAPDHP35-201ENST00000513369 CFTRP13569 1480 aa15.72■□□□□ 0.11
GAPDHP35-201ENST00000513369 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
GAPDHP35-201ENST00000513369 ERCC6Q03468 1493 aa15.63■□□□□ 0.09
GAPDHP35-201ENST00000513369 PRDM2Q13029 1718 aa15.61■□□□□ 0.09
GAPDHP35-201ENST00000513369 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
GAPDHP35-201ENST00000513369 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
GAPDHP35-201ENST00000513369 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
GAPDHP35-201ENST00000513369 THOC2Q8NI27 1593 aaKnown RBP15.53■□□□□ 0.08
GAPDHP35-201ENST00000513369 MRC2Q9UBG0 1479 aa15.49■□□□□ 0.07
GAPDHP35-201ENST00000513369 WDR62O43379 1518 aa15.45■□□□□ 0.06
GAPDHP35-201ENST00000513369 URB2Q14146 1524 aaKnown RBP15.43■□□□□ 0.06
GAPDHP35-201ENST00000513369 CUX2O14529 1486 aa15.41■□□□□ 0.06
GAPDHP35-201ENST00000513369 TOPBP1Q92547 1522 aa15.37■□□□□ 0.05
GAPDHP35-201ENST00000513369 DNMBPQ6XZF7 1577 aa15.36■□□□□ 0.05
GAPDHP35-201ENST00000513369 ABCC8Q09428 1581 aa15.35■□□□□ 0.05
GAPDHP35-201ENST00000513369 CUX1P39880 1505 aa15.33■□□□□ 0.04
GAPDHP35-201ENST00000513369 WRNQ14191 1432 aaPredicted RBP eCLIP15.28■□□□□ 0.04
GAPDHP35-201ENST00000513369 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
GAPDHP35-201ENST00000513369 POLA1P09884 1462 aaPredicted RBP15.25■□□□□ 0.03
GAPDHP35-201ENST00000513369 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
GAPDHP35-201ENST00000513369 FGD5Q6ZNL6 1462 aa15.24■□□□□ 0.03
GAPDHP35-201ENST00000513369 BIVM-ERCC5R4GMW8 1640 aa15.24■□□□□ 0.03
GAPDHP35-201ENST00000513369 IFT140Q96RY7 1462 aa15.21■□□□□ 0.03
GAPDHP35-201ENST00000513369 TARBP1Q13395 1621 aaKnown RBP15.2■□□□□ 0.02
GAPDHP35-201ENST00000513369 RAD54L2Q9Y4B4 1467 aa15.19■□□□□ 0.02
GAPDHP35-201ENST00000513369 SOGA1O94964 1423 aa15.18■□□□□ 0.02
GAPDHP35-201ENST00000513369 ZNF608Q9ULD9 1512 aaPredicted RBP15.15■□□□□ 0.02
GAPDHP35-201ENST00000513369 WDR97A6NE52 1622 aa15.12■□□□□ 0.01
GAPDHP35-201ENST00000513369 ABCA10Q8WWZ4 1543 aa15.1■□□□□ 0.01
GAPDHP35-201ENST00000513369 EIF4G3O43432 1585 aaKnown RBP15.09■□□□□ 0.01
GAPDHP35-201ENST00000513369 TDRD9Q8NDG6 1382 aaKnown RBP15.08■□□□□ 0
GAPDHP35-201ENST00000513369 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0
GAPDHP35-201ENST00000513369 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
GAPDHP35-201ENST00000513369 TRIM41Q8WV44 630 aa15.03■□□□□ -0
GAPDHP35-201ENST00000513369 GAPVD1Q14C86 1478 aa15.01□□□□□ -0.01
GAPDHP35-201ENST00000513369 CHIC1Q5VXU3 224 aa14.99□□□□□ -0.01
GAPDHP35-201ENST00000513369 GRIN2BQ13224 1484 aa14.98□□□□□ -0.01
GAPDHP35-201ENST00000513369 PBRM1Q86U86 1689 aa14.97□□□□□ -0.01
GAPDHP35-201ENST00000513369 SNAPC4Q5SXM2 1469 aa14.94□□□□□ -0.02
GAPDHP35-201ENST00000513369 KIF27Q86VH2 1401 aa14.93□□□□□ -0.02
GAPDHP35-201ENST00000513369 MAGI1Q96QZ7 1491 aaPredicted RBP14.92□□□□□ -0.02
GAPDHP35-201ENST00000513369 ERICH3Q5RHP9 1530 aa14.92□□□□□ -0.02
GAPDHP35-201ENST00000513369 RUSC2Q8N2Y8 1516 aa14.9□□□□□ -0.02
GAPDHP35-201ENST00000513369 IGF1RP08069 1367 aa14.87□□□□□ -0.03
GAPDHP35-201ENST00000513369 ADAMTS12P58397 1594 aa14.87□□□□□ -0.03
GAPDHP35-201ENST00000513369 SYNJ2O15056 1496 aa14.87□□□□□ -0.03
GAPDHP35-201ENST00000513369 CHD1O14646 1710 aa14.86□□□□□ -0.03
GAPDHP35-201ENST00000513369 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.03
GAPDHP35-201ENST00000513369 FBLN2P98095 1184 aa14.82□□□□□ -0.04
GAPDHP35-201ENST00000513369 CUL7Q14999 1698 aa14.81□□□□□ -0.04
GAPDHP35-201ENST00000513369 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
GAPDHP35-201ENST00000513369 GRIN2AQ12879 1464 aa14.79□□□□□ -0.04
GAPDHP35-201ENST00000513369 OSCARQ8IYS5 282 aa14.79□□□□□ -0.04
GAPDHP35-201ENST00000513369 EEA1Q15075 1411 aa14.78□□□□□ -0.04
GAPDHP35-201ENST00000513369 CARMIL1Q5VZK9 1371 aa14.77□□□□□ -0.04
GAPDHP35-201ENST00000513369 CEP170Q5SW79 1584 aa14.73□□□□□ -0.05
GAPDHP35-201ENST00000513369 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
GAPDHP35-201ENST00000513369 DNAJC5Q9H3Z4 198 aa14.73□□□□□ -0.05
GAPDHP35-201ENST00000513369 NUP160Q12769 1436 aa14.73□□□□□ -0.05
GAPDHP35-201ENST00000513369 PRXQ9BXM0 1461 aa14.72□□□□□ -0.05
GAPDHP35-201ENST00000513369 CLASP1Q7Z460 1538 aa14.71□□□□□ -0.05
GAPDHP35-201ENST00000513369 RAPGEF2Q9Y4G8 1499 aa14.71□□□□□ -0.05
GAPDHP35-201ENST00000513369 FAM9AQ8IZU1 332 aaPredicted RBP14.71□□□□□ -0.05
GAPDHP35-201ENST00000513369 KIF21BO75037 1637 aa14.63□□□□□ -0.07
GAPDHP35-201ENST00000513369 KIAA0586Q9BVV6 1533 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms